Manual pages
Alphabetical index (B).
| [ Alias ↣ ] Name (section) | Brief |
|---|---|
| B(3perl) | The Perl Compiler Backend. |
| b1ff(6) ↣ filters(6) | … |
| b2(1) | Software build tool. |
| b2m.xemacs21(1) | This program converts a babyl mailbox to a standard unix mailbox. |
| b2sum(1) | Compute and check BLAKE2 message digest. |
| b43-fwcutter(1) | Utility for extracting Broadcom 43xx firmware. |
| b5i2iso(1) | Convert a BlindWrite image file into standard ISO image file. |
| B::Clobbers(3pm) | Clobbering analyzer. |
| B::Compiling(3pm) | Expose PL_compiling to perl. |
| B::Concise(3perl) | Walk Perl syntax tree, printing concise info about ops. |
| B::ConstOptree(3pm) | Optree constant folding for $^O, $^V, and $]. |
| B::Debug(3perl) | Walk Perl syntax tree, printing debug info about ops. |
| B::Deparse(3perl) | Perl compiler backend to produce perl code. |
| B::Hooks::EndOfScope(3pm) | Execute code after a scope finished compilation. |
| B::Hooks::EndOfScope::PP(3pm) | Execute code after a scope finished compilation - PP implementation. |
| B::Hooks::EndOfScope::XS(3pm) | Execute code after a scope finished compilation - XS implementation. |
| B::Hooks::OP::Annotation(3pm) | Annotate and delegate hooked OPs. |
| B::Hooks::OP::Check(3pm) | Wrap OP check callbacks. |
| B::Hooks::OP::Check::EntersubForCV(3pm) | Invoke callbacks on construction of entersub OPs for certain CVs. |
| B::Hooks::OP::PPAddr(3pm) | Hook into opcode execution. |
| B::Hooks::Parser(3pm) | Interface to perl's parser variables. |
| B::Keywords(3pm) | Lists of reserved barewords and symbol names. |
| B::Lint(3pm) | Perl lint. |
| B::Lint::Debug(3pm) | Adds debugging stringification to B::. |
| B::Module::Info(3pm) | Information about Perl modules. |
| B::Op_private(3perl) | OP op_private flag definitions. |
| B::PerlReq(3pm) | Perl compiler backend to extract Perl dependencies. |
| B::Showlex(3perl) | Show lexical variables used in functions or files. |
| B::Terse(3perl) | Walk Perl syntax tree, printing terse info about ops. |
| B::Utils(3pm) | Helper functions for op tree manipulation. |
| B::Utils::OP(3pm) | Op related utility functions for perl. |
| B::Walker(3pm) | Dumb walker, optree ranger. |
| B::Xref(3perl) | Generates cross reference reports for Perl programs. |
| ba_and_ba(3pub) ↣ bitarr(3pub) | … |
| ba_clear(3pub) ↣ bitarr(3pub) | … |
| ba_clear_all(3pub) ↣ bitarr(3pub) | … |
| ba_copy(3pub) ↣ bitarr(3pub) | … |
| ba_create(3pub) ↣ bitarr(3pub) | … |
| ba_destroy(3pub) ↣ bitarr(3pub) | … |
| ba_not(3pub) ↣ bitarr(3pub) | … |
| ba_or_ba(3pub) ↣ bitarr(3pub) | … |
| ba_or_not_ba(3pub) ↣ bitarr(3pub) | … |
| ba_query(3pub) ↣ bitarr(3pub) | … |
| ba_resize(3pub) ↣ bitarr(3pub) | … |
| ba_set(3pub) ↣ bitarr(3pub) | … |
| ba_xor_ba(3pub) ↣ bitarr(3pub) | … |
| babel(1) | A converter for chemistry and molecular modeling data files. |
| babeld(8) | Ad-hoc network routing daemon. |
| babeltrace(1) | Babeltrace Trace Viewer and Converter. |
| babeltrace-log(1) | Babeltrace Log Converter. |
| babiloo(1) | Dictionary viewer with multi-languages support. |
| backblaze-b2(1) | B2 Command Line Tool. |
| backbone_global_to_local(1) ↣ addUnalignedIntervals(1) | Part of mauveAligner package. |
| backdoor-factory(1) | Inject predefined or user-defined shellcode in binaries. |
| backend(7) | Cups backend transmission interfaces. |
| backend-spec(7) | Interface between jw and its backends. |
| backend.hpp(3elektra) | Implements a way to build and deal with a backend. |
| backends.hpp(3elektra) | Allows one to list all available backends. |
| backgammon(6) | The game of backgammon. |
| backintime(1) | A simple backup tool for Linux. |
| backintime-askpass(1) | A simple backup tool for Linux. |
| backintime-config(1) | BackInTime configuration files. |
| backintime-qt(1) ↣ backintime(1) | A simple backup tool for Linux. |
| backintime-qt4(1) | A simple backup tool. |
| backport-dsc(1) | Backport Debian source packages. |
| backportpackage(1) | Helper to test package backports. |
| backstep(1) | Backstep is a program that draws icons for minimized windows on your desktop. |
| backtrace(3) | Support for application self-debugging. |
| backtrace_symbols(3) ↣ backtrace(3) | Support for application self-debugging. |
| backtrace_symbols_fd(3) ↣ backtrace(3) | Support for application self-debugging. |
| backtracker(1gmt) | Generate forward and backward flowlines and hotspot tracks. |
| backtranambig(1e) | Back-translate a protein sequence to ambiguous nucleotide sequence. |
| backtranseq(1e) | Back-translate a protein sequence to a nucleotide sequence. |
| backup(8) | Introduction to the backup command suite. |
| backup-checkallused(1) | Check chiark-backup configuration. |
| backup-driver(1) | Entry point for cron or inittab to start backups. |
| backup-labeltape(1) | Display or change tape label. |
| backup-loaded(1) | Tell the chiark-backup system what to do with a new tape. |
| backup-manager(8) | An easy to use backup tool for your Linux box. |
| backup-manager-purge(8) | Backup-manager's wrapper for outdating files. |
| backup-manager-upload(8) | Multiprotocol uploader for backup-manager. |
| backup-takedown(1) | Bring some system services down for backups. |
| backup-whatsthis(1) | Read an id off a tape and display it. |
| backup.d(5) | Action configuration files for backupninja(1). |
| backup2l(8) | Low-maintenance backup/restore tool. |
| backup_adddump(8) | Defines a dump level in the dump hierarchy. |
| backup_addhost(8) | Adds a Tape Coordinator entry to the Backup Database. |
| backup_addvolentry(8) | Defines a volume entry in a volume set. |
| backup_addvolset(8) | Creates a new (empty) volume set. |
| backup_all(1) ↣ rsbac-admin(1) | Rule Set Based Access Control. |
| backup_all_1.1.2(1) ↣ rsbac-admin(1) | Rule Set Based Access Control. |
| backup_apropos(8) | Displays each help entry containing a keyword string. |
| backup_dbverify(8) | Checks the integrity of the Backup Database. |
| backup_deldump(8) | Deletes a dump level from the Backup Database. |
| backup_deletedump(8) | Deletes one or more dump records from the Backup Database. |
| backup_delhost(8) | Deletes a Tape Coordinator entry from the Backup Database. |
| backup_delvolentry(8) | Deletes a volume entry from a volume set. |
| backup_delvolset(8) | Deletes one or more volume sets from the Backup Database. |
| backup_diskrestore(8) | Restores the entire contents of a partition. |
| backup_dump(8) | Creates a dump (dumps a volume set at a particular dump level). |
| backup_dumpinfo(8) | Displays a dump record from the Backup Database. |
| backup_help(8) | Displays help for backup commands. |
| backup_interactive(8) | Enters interactive mode. |
| backup_jobs(8) | Lists pending and running operations in interactive mode. |
| backup_kill(8) | Terminates a pending or running operation. |
| backup_labeltape(8) | Creates the magnetic label on a tape. |
| backup_listdumps(8) | Displays the dump hierarchy from the Backup Database. |
| backup_listhosts(8) | Lists Tape Coordinators registered in the Backup Database. |
| backup_listvolsets(8) | Lists volume set entries from the Backup Database. |
| backup_quit(8) | Leaves interactive mode. |
| backup_readlabel(8) | Reads and displays a tape's label. |
| backup_restoredb(8) | Restores a saved copy of the Backup Database. |
| backup_savedb(8) | Creates a saved copy of the Backup Database. |
| backup_scantape(8) | Extracts dump information from a tape. |
| backup_setexp(8) | Sets the expiration date for existing dump levels. |
| backup_status(8) | Reports a Tape Coordinator's status. |
| backup_volinfo(8) | Displays a volume's dump history from the Backup Database. |
| backup_volrestore(8) | Restores one or more volumes. |
| backup_volsetrestore(8) | Restores all volumes in a volume set. |
| backupchecker(1) | Fully automated backup checker. |
| BackupLog(5) | Traces Backup Server operations. |
| backupninja(1) | A lightweight, extensible meta-backup system. |
| backupninja.conf(5) | Configuration file(s) for backupninja (1). |
| backuppc(8) | … |
| BackupPC::XS(3pm) | Perl extension for BackupPC libraries. |
| bacon(1) | Small RSpec clone. |
| bacteria_tradis(1) | Bio-tradis: run a TraDIS analysis. |
| bacula(8) | The Network Backup Solution. |
| bacula-console(8) ↣ bconsole(8) | Bacula's management Console. |
| bacula-dir(8) | Bacula Director. |
| bacula-fd(8) | Bacula's File Daemon. |
| bacula-sd(8) | Bacula's Storage Daemon. |
| badblocks(8) | Search a device for bad blocks. |
| BADISR_vect(3avr) ↣ avr_interrupts(3avr) | … |
| bak2db(8) | Directory Server script for restoring a backup. |
| bak2db-online(8) | Directory Server perl script for restoring a backup. |
| balance(1) | A simple TCP proxy with load balancing and failover mechanisms. |
| balder2d(6) | 2D zero gravity shooter. |
| baldurs-gate(6) ↣ gemrb(6) | Emulator for Infinity Engine-based games. |
| baldurs-gate-2(6) ↣ gemrb(6) | Emulator for Infinity Engine-based games. |
| baldurs-gate-2-tob(6) ↣ gemrb(6) | Emulator for Infinity Engine-based games. |
| ballerburg(6) | A castle combat game. |
| BalloonContents(1x) | Afterstep BalloonContents. |
| balls(1) | Preprocessor for space-filling models in Raster3D molecular graphics package. |
| ballz(6) | Platform/puzzle game where you control a rolling ball. |
| balsa(1) | The GNOME email client. |
| balsa-ab(1) ↣ balsa(1) | The GNOME email client. |
| bam(1) | Fast and flexible build system. |
| bam-read(1) | Parse bam files after multi-mapping reads have been assigned and aggregate read mapping information. |
| bam2bed(1) | Manual page for bam2bed 2.4.26+dfsg. |
| bam2hints(1) | Convert mRNA-to-genome alignments in BAM format into a hint file for AUGUSTUS. |
| bam2starch(1) | Manual page for bam2starch 2.4.26+dfsg. |
| bam2wig(1) | Convert BAM to WIG. |
| bam_pipeline(1) | BAM pipeline of PALEOMIX suite. |
| bam_rmdup_collapsed(1) | Filter BAM file for PCR duplicates. |
| bambam(6) | A keyboard mashing and doodling game for babies. |
| bamg(1rheolef) | Bidimensional anisotropic mesh generator. |
| bamg2geo(1rheolef) | Convert bamg mesh in geo format. |
| bamtools(1) | Toolkit for manipulating BAM (genome alignment) files. |
| bamview(1) | Visualizing genome sequencing read alignment stored in BAM files. |
| banana(1e) | Plot bending and curvature data for B-DNA. |
| band(2rheolef) | Compute the band arround a level set. |
| bandit(1) | Security oriented static analyzer for python code. |
| bandwidthd(8) | Tracks usage of TCP/IP and builds html files with graphs. |
| bandwidthd.conf(5) | Configuration file for bandwidthd. |
| banner(1) | Print large banner. |
| Banner(1x) | The AfterStep Logo module. |
| Banner(3I) | One line title bar. |
| banshee(1) | Media Management and Playback application. |
| baobab(1) | A graphical tool to analyze disk usage. |
| bar(1) | Show information about a data transfer. |
| barbican-db-manage(8) | OpenStack Keystore as a Service - DB Manager. |
| barbican-keystone-listener(8) | OpenStack Keystore as a Service - Keystone Listener. |
| barbican-manage(8) | OpenStack Keystore as a Service - Manager. |
| barbican-retry(8) | OpenStack Keystore as a Service - Retry. |
| barbican-worker(8) | OpenStack Keystore as a Service - Worker. |
| barchartscreenshots(3) | Bar Charts, Histograms. |
| barcode(1) | A stand alone program to run the barcode library. |
| barcode(3) | A library to create and print bar codes. |
| barcode(6x) | Draws a random sequence of barcodes for the products you enjoy. |
| Barcode::Code128(3pm) | Generate CODE 128 bar codes. |
| Barcode::DataMatrix(3pm) | Generate data for Data Matrix barcodes. |
| Barcode::DataMatrix::CharDataFiller(3pm) | Handle filling character data within the data matrix array. |
| Barcode::DataMatrix::Constants(3pm) | Constants associated with the Reed-Solomon error correction encoding used for. |
| Barcode::DataMatrix::Engine(3pm) | The engine which generates the data matrix bitmap. |
| Barcode::DataMatrix::PNG(3pm) | Generate PNG graphical representations of Data Matrix barcodes. |
| Barcode::DataMatrix::Reed(3pm) | Renamed version of Algorithm::DataMatrix::Reed. |
| Barcode::ZBar(3pm) | Perl interface to the ZBar Barcode Reader. |
| Barcode::ZBar::Image(3pm) | Image object to scan for bar codes. |
| Barcode::ZBar::ImageScanner(3pm) | Scan images for bar codes. |
| Barcode::ZBar::Processor(3pm) | Self-contained bar code reader. |
| Barcode::ZBar::Symbol(3pm) | Bar code scan result object. |
| bardecode(1) | Barcode recognition tool of the ExactImage toolkit. |
| barectf(1) | Generate C99 code that can write native CTF packets. |
| bareftp(1) | Graphical file transfer client. |
| bareword::filehandles(3pm) | Disables bareword filehandles. |
| barman(1) | Backup and Recovery Manager for PostgreSQL. |
| barman(5) | Backup and Recovery Manager for PostgreSQL. |
| barman-wal-restore(1) | 'restore_command' based on Barman's get-wal. |
| barnowl(1) | Tty‐based zephyr client. |
| barrage(6) | Rather destructive action game. |
| barrier(3clc) | All work-items in a work-group executing the kernel on a processor must execute this function before. |
| barrier(3G) | Synchronize execution of multiple shader invocations. |
| barrnap(1) | Rapid ribosomal RNA prediction. |
| bart(1) | Berkeley Advanced Reconstruction Toolbox. |
| Base(1x) | Essential AfterStep configuration options. |
| base(3perl) | Establish an ISA relationship with base classes at compile time. |
| base.h(3) | Base elements for RTP stacks: constants, types and global functions. |
| base16(1) ↣ basez(1) | Base 16/32/64 encode/decode data to standard output. |
| base32(1) | Base32 encode/decode data and print to standard output. |
| base32(3tcl) | Base32 standard encoding. |
| base32core(3tcl) | Expanding basic base32 maps. |
| base32hex(1) ↣ basez(1) | Base 16/32/64 encode/decode data to standard output. |
| base32hex(3tcl) | Base32 extended hex encoding. |
| base32plain(1) ↣ basez(1) | Base 16/32/64 encode/decode data to standard output. |
| base64(1) | Base64 encode/decode data and print to standard output. |
| base64(3erl) | Provides base64 encode and decode, see. |
| base64(3tcl) | Base64-encode/decode binary data. |
| base64(3trf) | Encoding "base64". |
| base64mime(1) ↣ basez(1) | Base 16/32/64 encode/decode data to standard output. |
| base64pem(1) ↣ basez(1) | Base 16/32/64 encode/decode data to standard output. |
| base64plain(1) ↣ basez(1) | Base 16/32/64 encode/decode data to standard output. |
| base64url(1) ↣ basez(1) | Base 16/32/64 encode/decode data to standard output. |
| base_evolve(1) | Produce a synthetic alignment by simulating evolution according to. |
| basename(1) | Strip directory and suffix from filenames. |
| basename(1plan9) | Strip file name affixes. |
| basename(1posix) | Return non-directory portion of a pathname. |
| baseName(3) ↣ cdk_misc(3) | Curses Development Kit Miscellaneous Routines. |
| basename(3) | Parse pathname components. |
| basename(3posix) | Return the last component of a pathname. |
| basepods(1p) | Print out pod paths for the standard perl manpages. |
| basex(1) | XML database system and XPath/XQuery processor (command line mode). |
| basexclient(1) | XML database system and XPath/XQuery processor (client mode). |
| basexgui(1) | XML database system and XPath/XQuery processor (graphical mode). |
| basexserver(1) | XML database system and XPath/XQuery processor (server mode). |
| basez(1) | Base 16/32/64 encode/decode data to standard output. |
| bash(1) | GNU Bourne-Again SHell. |
| bash-builtins(7) | Bash built-in commands, see bash(1). |
| bash-static(1) | GNU Bourne-Again SHell. |
| bash5tools(1) | Tool for extracting data from .bas.h5 files. |
| bash5tools.py(1) ↣ bash5tools(1) | Tool for extracting data from .bas.h5 files. |
| bashbug(1) | Report a bug in bash. |
| bashburn(1) | A bash script CD Burner Writer. |
| bashreadline-bpfcc(8) | Print entered bash commands system wide. Uses Linux eBPF/bcc. |
| basic256(1) | Educational BASIC programming environment for children. |
| BASIC_CONSTRAINTS_free(3ssl) ↣ X509_dup(3ssl) | … |
| BASIC_CONSTRAINTS_new(3ssl) ↣ X509_dup(3ssl) | … |
| basic_db_auth(8) | Database auth helper for Squid. |
| basic_getpwnam_auth(8) | Local Users auth helper for Squid. |
| basic_ldap_auth(8) | LDAP authentication helper for Squid. |
| basic_ncsa_auth(8) | NCSA httpd-style password file authentication helper for Squid. |
| basic_pam_auth(8) | PAM Basic authentication helper for Squid. |
| basic_pop3_auth(8) | POP3 authenticator for Squid. |
| basic_radius_auth(8) | Squid RADIUS authentication helper. |
| basic_sasl_auth(8) | Basic Authentication using SASL (specifically the cyrus-sasl authentication method). |
| BasicDialog(3U) | An assortment of useful. |
| basictopvf(1) ↣ pvf(1) | Utilities to convert various sound formats. |
| BasiliskII-jit(1) | A 68k Macintosh emulator. |
| BasiliskII-nojit(1) | A 68k Macintosh emulator. |
| basis(7rheolef) | Polynomial basis. |
| basket(1) | Note-taking application. |
| BasketLosses(1) | Example of Modeling Losses Across Correlated Assets. |
| bastet(6) | Tetris(r) clone with "bastard" block-choosing AI. |
| bat(1) | Bacula Administration Tool Console. |
| bat2gts(1) | Takes a bathymetry file (three columns: longitude, latitude (degree), depth (meters)) and generates. |
| batadv-vis(8) | Batman-adv visualization server. |
| batch(1) ↣ at(1) | Queue, examine or delete jobs for later execution. |
| batch(1posix) | Schedule commands to be executed in a batch queue. |
| batch_crop(1) | Crop a set of images. |
| batch_image_convert(1) | Use VIPS to convert a set of images to a new type. |
| batch_rubber_sheet(1) | Warp a set of images with a rubber-sheet transformation. |
| batcher(8) | Article batching for InterNetNews. |
| batctl(8) | B.A.T.M.A.N. advanced control and management tool. |
| batmand(8) | Better approach to mobile ad‐hoc networking. |
| batmon(1) | Battery monitor for GNUstep. |
| bats(1) | Bash Automated Testing System. |
| bats(7) | Bats test file format. |
| battery-graph(1) | Show a graph of the battery charge. |
| battery-log(1) | Extract battery statistics. |
| battery-stats(5) | Collected battery statistics. |
| battery-stats-collector(8) | Collect statistics about battery charge. |
| battlestar(6) | A tropical adventure game. |
| bauble(1) | Software application to manage a collection of botanical specimens. |
| bauble-admin(1) | Create bauble's database and change some of its properties. |
| BAUD_TOL(3avr) ↣ util_setbaud(3avr) | … |
| baudrate(3ncurses) ↣ termattrs(3ncurses) | … |
| baudrate_sp(3ncurses) ↣ sp_funcs(3ncurses) | Curses screen-pointer extension. |
| baycom(9) | Amateur (AX.25) packet radio network driver for baycom modems. |
| baycomepp(8) | Baycom EPP modem driver. |
| baycomusb(8) | Baycom USB modem diagnostics utility. |
| bayesol(1) | A Bayes solution calculator for use with dbacl. |
| bb(6) | An ASCII-art demo. |
| bbackupctl(8) | Control the Box Backup client daemon. |
| bbackupd(8) | Box Backup client daemon. |
| bbackupd-config(8) | Box Backup client daemon configuration file generator. |
| bbackupd.conf(5) | Box Backup client daemon configuration file. |
| bbackupquery(8) | Box Backup store query and file retrieval. |
| bbAnalyze(1) ↣ addUnalignedIntervals(1) | Part of mauveAligner package. |
| bbcheck(1) | Run automated tests on BitBabbler hardware RNG devices. |
| bbcnews(1sr) ↣ elvi(1sr) | Surfraw(1) search tools. |
| bbctl(1) | Query and control tool for BitBabbler hardware RNG devices. |
| bbdb-areacode-split(1) | Looks for phone numbers in your .bbdb. |
| bbdb-cid(1) | Caller-ID-logger. |
| bbdb-srv(1) | Converts Mail-Headers to an Emacs-Lisp String. |
| bbdb-unlazy-lock(1) | Removes crap from lazy-lock from your .bbdb. |
| bbe(1) | Binary block editor. |
| bbFilter(1) | This is a part of mauveAligner package. |
| bbl2bib(1) | Convert thebibliography environment to a bib file. |
| bbmail(1) | Mailbox flag for X. |
| bbox(1) | Prints out the bounding box of a rawppm or rawpbm image. |
| bboxx(1) | The program outputs the page number and the Bounding Box parameters for every page in the file. |
| bbpager(1) | Pager for the Blackbox window manager. |
| bbqsql(1) | SQL Injection Exploitation Tool. |
| bbrun(1) | An elegant tool for the Blackbox window manager that runs commands. |
| bbstoreaccounts(8) | Box Backup store accounts manager. |
| bbstored(8) | Box Backup store daemon. |
| bbstored-certs(8) | Manage certificates for the Box Backup system. |
| bbstored-config(8) | Box Backup store daemon configuration file generator. |
| bbstored.conf(5) | Box Backup store daemon configuration file. |
| bbtime(1) | Display the time in a small blackbox style window. |
| bbvirt(1) | Hotplug BitBabbler devices into libvirt managed domains. |
| bc(1) | An arbitrary precision calculator language. |
| bc(1plan9) | Arbitrary-precision arithmetic language. |
| bc(1posix) | Arbitrary-precision arithmetic language. |
| BC(3ncurses) ↣ termcap(3ncurses) | Direct curses interface to the. |
| bcache-super-show(8) | Print the bcache superblock. |
| bcat(1) ↣ speech-tools(1) | Programs for audio and speech manipulation. |
| bcc(1) | Bruce's C compiler. |
| bccmd(1) | Utility for the CSR BCCMD interface. |
| bcd(6) | Reformat input as punch cards, paper tape or morse code. |
| bce(4freebsd) | QLogic NetXtreme II (BCM5706/5708/5709/5716) PCI/PCIe Gigabit Ethernet adapter driver. |
| bcfg2(1) | Bcfg2 client tool. |
| bcfg2-admin(8) | Perform repository administration tasks. |
| bcfg2-build-reports(8) | Generate state reports for Bcfg2 clients. |
| bcfg2-crypt(8) | Bcfg2 encryption and decryption utility. |
| bcfg2-info(8) | Creates a local version of the Bcfg2 server core for state observation. |
| bcfg2-lint(8) | Check Bcfg2 specification for validity, common mistakes, and style. |
| bcfg2-lint.conf(5) | Configuration parameters for bcfg2-lint. |
| bcfg2-report-collector(8) | Reports collection daemon. |
| bcfg2-reports(8) | Query reporting system for client status. |
| bcfg2-server(8) | Server for client configuration specifications. |
| bcfg2.conf(5) | Configuration parameters for Bcfg2. |
| bch(1) | Open the debian/changelog in sensible editor, appending a line showing the current files that have been. |
| bchunk(1) | CD image format conversion from bin/cue to iso/cdr. |
| bcma(4freebsd) | Broadcom AMBA Backplane driver. |
| bcmp(3) | Compare byte sequences. |
| bcmxcp(8) | Driver for UPSes supporting the serial BCM/XCP protocol. |
| bcmxcp_usb(8) | Experimental driver for UPSes supporting the BCM/XCP protocol over USB. |
| bcomps(1) | Biconnected components filter for graphs. |
| bconsole(8) | Bacula's management Console. |
| bcopy(3) | Copy byte sequence. |
| bcopy(8) | Bacula's 'Copy from tape'. |
| bcp(1) | Extract subsets of Boost. |
| bcpp(1) | Make C++ beautifier. |
| bcrelay(8) | A broadcast relay daemon. |
| bcron-exec(8) | Execute jobs on behalf of bcron-sched. |
| bcron-sched(8) | Bcron system scheduler. |
| bcron-spool(8) | Manage user crontab submissions. |
| bcron-start(8) | Start the bcron scheduling system. |
| bcron-update(8) | Update system crontabs. |
| bcrontab(1) | Manage users crontab files. |
| bcrypt(1) | Blowfish file encryption. |
| bct_dump(1) | Tegra BCT disassembly tool. |
| bd(1) | Quickly go back to a specific parent directory in bash. |
| bd_info(1) | Show BD disc info. |
| bd_pgsql_purge(8) | Summarizer script for bandwidthd (postgresql mode). |
| bdb.DB0(5) | Contain the Backup Database and associated log. |
| bdb_recover(8) | Utility for recovering OpenSIPS db_berkeley files. |
| bdbvu(1) | Simple GUI tool to browse Berkeley DB databases. |
| bdd(1) | Mutli Reduced Ordered Binary Decision Diagrams. |
| bddToAblCct(3) | Converts a BDD into an ABL within a circuit. |
| bdeinfo(1) | Determines information about a BitLocker Drive Encrypted (BDE) volume. |
| bdemount(1) | Mounts a BitLocker Drive Encryption (BDE) encrypted volume. |
| bdf2psf(1) | Convert a BDF font to PSF format for the Linux console. |
| bdf_proxy(1) | Patch binaries during download ala MITM. |
| bdfimplode(1) | Convert a BDF font into GNU Unifont .hex format. |
| bdflush(2) | Start, flush, or tune buffer-dirty-flush daemon. |
| bdfresize(1) | Resize BDF Format Font. |
| bdftobogl(1) | Bogl/bterm font convertor. |
| bdftogd(1) ↣ libgd-tools(1) | Programs to convert between gd and other graphics formats. |
| bdftopcf(1) | Convert X font from Bitmap Distribution Format to Portable Compiled Format. |
| bdftruncate(1) | Generate truncated BDF font from ISO 10646-1-encoded BDF font. |
| bdii-update(1) | The bdii update process. |
| bdump(1) | Visualization of biniou data. |
| bdy(1gv) | Boundary curve finder. |
| bdy(3gv) | Boundary curve finder. |
| be(1) | Distributed bug tracking from the command line. |
| be16dec(3bsd) ↣ byteorder(3bsd) | … |
| be16dec(9freebsd) | … |
| be16enc(3bsd) ↣ byteorder(3bsd) | … |
| be16enc(9freebsd) | … |
| be16toh(3) ↣ endian(3) | … |
| be16toh(9freebsd) | … |
| be32dec(3bsd) ↣ byteorder(3bsd) | … |
| be32dec(9freebsd) | … |
| be32enc(3bsd) ↣ byteorder(3bsd) | … |
| be32enc(9freebsd) | … |
| be32toh(3) ↣ endian(3) | … |
| be32toh(9freebsd) | … |
| be64dec(3bsd) ↣ byteorder(3bsd) | … |
| be64dec(9freebsd) | … |
| be64enc(3bsd) ↣ byteorder(3bsd) | … |
| be64enc(9freebsd) | … |
| be64toh(3) ↣ endian(3) | … |
| be64toh(9freebsd) | … |
| beacon(8) | Transmit periodic messages on an AX.25 port. |
| beads(1) | 2D gel electrophoresis spot detection. |
| beagle(1) | Genotype calling, genotype phasing and imputation of ungenotyped markers. |
| beagle.h(3) | This file documents the API as well as header for the Broad-platform Evolutionary. |
| BeagleInstanceDetails(3) | Information about a specific instance. |
| BeagleOperation(3) | A list of integer indices which specify a partial likelihoods operation. |
| BeagleResource(3) | Description of a hardware resource. |
| BeagleResourceList(3) | List of hardware resources. |
| beam_lib(3erl) | An interface to the BEAM file format. |
| beancounter(1p) | Stock portfolio performance monitor tool. |
| beanstalkd(1) | Simple, fast work queue. |
| bear(1) | Build EAR. |
| bearerbox(8) ↣ kannel(8) | Parts of Kannel, the WAP and SMS gateway. |
| bearoffdump(6) | Dump a position from the GNU Backgammon bearoff database. |
| beast-mcmc(1) | Bayesian evolutionary analysis sampling trees. |
| beast2-mcmc(1) | Bayesian MCMC phylogenetic inference. |
| beauti(1) | Bayesian Evolutionary Analysis Utility. |
| beauti2(1) | Matches beast2-mcmc. |
| beav(1) | Binary file editor and viewer. |
| bed2gff3(1p) | Convert UCSC Genome Browser-format gene files into GFF files suitable for loading into. |
| bedextract(1) | Manual page for bedextract 2.4.26+dfsg. |
| bedmap(1) | Manual page for bedmap 2.4.26+dfsg. |
| bedops(1) | Manual page for bedops 2.4.26+dfsg. |
| bedops-starch(1) | Manual page for bedops-starch 2.4.26+dfsg. |
| bedup(8) | Deduplication program with additional knowledge of burp. |
| bee(3tcl) | BitTorrent Serialization Format Encoder/Decoder. |
| beef(1) | Flexible Brainfuck interpreter. |
| beep(1) | Beep the pc speaker any number of ways. |
| Beep(3) ↣ cdk_misc(3) | Curses Development Kit Miscellaneous Routines. |
| beep(3ncurses) | Curses bell and screen flash routines. |
| beep_sp(3ncurses) ↣ sp_funcs(3ncurses) | Curses screen-pointer extension. |
| beer(1) | Graphical frontend to SAFT. |
| beh(3) | Generic behavioural data structures. |
| beh_debug(3) | BEH structures displayer-debugger. |
| beh_depend(3) | Compute forward dependencies in a description. |
| beh_error(3) | … |
| beh_makbdd(3) | Create a BDD for each expression in a description. |
| beh_makgex(3) | Create a GEX for each expression in a description. |
| beh_message(3) | … |
| beilagen(6) ↣ spruch(6) | Print a random German adage. |
| bel(1) | Open a shell or execute a command on a remote computer through several machines. |
| belenios-tool(1) | Election management tool. |
| belkin(8) | Driver for Belkin serial UPS equipment. |
| belkinunv(8) | Driver for Belkin "Universal UPS" and compatible. |
| bell(3tk) | Ring a display's bell. |
| belvu(1) | View multiple alignments in good-looking colours. |
| ben(1) | Transition tracker manager. |
| bench(3tcl) | Bench - Processing benchmark suites. |
| bench_intro(3tcl) | Bench introduction. |
| bench_lang_intro(3tcl) | Bench language introduction. |
| bench_lang_spec(3tcl) | Bench language specification. |
| bench_read(3tcl) | Bench::in - Reading benchmark results. |
| bench_wcsv(3tcl) | Bench::out::csv - Formatting benchmark results as CSV. |
| bench_wtext(3tcl) | Bench::out::text - Formatting benchmark results as human readable text. |
| benchcmp(1) | Displays performance changes between benchmarks. |
| Benchmark(3perl) | Benchmark running times of Perl code. |
| Benchmark::Apps(3pm) | Simple interface to benchmark applications. |
| Benchmark::ProgressBar(3pm) | Display Progress Bar While You Wait For Your Benchmark. |
| Benchmark::Timer(3pm) | Benchmarking with statistical confidence. |
| benchmarks(3avr) | … |
| Bencode(3pm) | BitTorrent serialisation format. |
| BER(3pm) | Basic Encoding Rules (BER) of Abstract Syntax Notation One (ASN.1). |
| ber_alloc_t(3) | … |
| ber_bvarray_add(3) | … |
| ber_bvarray_free(3) | … |
| ber_bvdup(3) | … |
| ber_bvecadd(3) | … |
| ber_bvecfree(3) | … |
| ber_bvfree(3) | … |
| ber_bvstr(3) | … |
| ber_bvstrdup(3) | … |
| ber_dupbv(3) | … |
| ber_first_element(3) | … |
| ber_flush(3) | … |
| ber_free(3) | … |
| ber_get_bitstring(3) | … |
| ber_get_boolean(3) | … |
| ber_get_enum(3) | … |
| ber_get_int(3) | … |
| ber_get_next(3) | … |
| ber_get_null(3) | … |
| ber_get_stringa(3) | … |
| ber_get_stringb(3) | … |
| ber_int_t(3) ↣ lber-types(3) | … |
| ber_len_t(3) ↣ lber-types(3) | … |
| ber_memalloc(3) ↣ lber-memory(3) | OpenLDAP LBER memory allocators. |
| ber_memcalloc(3) ↣ lber-memory(3) | OpenLDAP LBER memory allocators. |
| ber_memfree(3) ↣ lber-memory(3) | OpenLDAP LBER memory allocators. |
| ber_memrealloc(3) ↣ lber-memory(3) | OpenLDAP LBER memory allocators. |
| ber_next_element(3) | … |
| ber_peek_tag(3) | … |
| ber_printf(3) | … |
| ber_put_bitstring(3) ↣ lber-encode(3) | … |
| ber_put_boolean(3) ↣ lber-encode(3) | … |
| ber_put_enum(3) | … |
| ber_put_int(3) | … |
| ber_put_null(3) | … |
| ber_put_ostring(3) | … |
| ber_put_seq(3) | … |
| ber_put_set(3) | … |
| ber_put_string(3) | … |
| ber_scanf(3) | … |
| ber_skip_tag(3) | … |
| ber_start_seq(3) ↣ lber-encode(3) | … |
| ber_start_set(3) | … |
| ber_str2bv(3) | … |
| ber_tag_t(3) ↣ lber-types(3) | … |
| berdecode(1) | Decode BER encoded data. |
| berkeley-abc(1) | A System for Sequential Synthesis and Verification. |
| berkeley-express(1) | Streaming quantification for high-throughput sequencing. |
| berkeley_db5.3_svc(1) | Berkeley DB RPC server. |
| berkeley_db_svc(1) ↣ berkeley_db5.3_svc(1) | Berkeley DB RPC server. |
| BerkeleyDB(3pm) | Perl extension for Berkeley DB version 2, 3, 4 or 5. |
| BermudanSwaption(1) | Example of using QuantLib. |
| berusky(6) | Logic game based on an ancient puzzle named Sokoban. |
| berusky2(6) | Logic game Bugs Escape 3D. |
| besinfo(1) | Display basic information about a BES. |
| bespp(1) | Pretty print a BES. |
| besside-ng(8) | Crack a WEP or WPA key without user intervention and collaborate with WPA cracking statistics. |
| besside-ng-crawler(1) | Filter EAPOL frames from a directory of capture files. |
| Best(3pm) | Load modules with fallback. |
| bestfcom(8) | Driver for Best Power Fortress/Ferrups. |
| bestfit_color(3alleg4) | Finds a palette color fitting the requested RGB values. Allegro game programming library. |
| bestfortress(8) | Driver for old Best Fortress UPS equipment. |
| bestuferrups(8) | Driver for Best Power Micro-Ferrups. |
| bestups(8) | Driver for Best Power / SOLA (Phoenixtec protocol) UPS equipment. |
| betaradio(1) | An easy way to listen to internet radio of Taiwan. |
| Between(6) | A game about consciousness and isolation. |
| between-two-genes(1) | Select a range of tab-delimited lines. |
| Bevel(1x) | Afterstep Bevel. |
| bextract(8) | Bacula's 'Extract from tape'. |
| bez2mesh(1gv) | Dices a BEZ file to a list of MESHes. |
| bf(1) | Yet another Brainfuck interpreter. |
| bf-animation-editor(1) | The animation editor for the Bear Engine. |
| bf-level-editor(1) | The level editor for the Bear Engine. |
| bf-model-editor(1) | The model editor for the Bear Engine. |
| BF_cbc_encrypt(3ssl) ↣ BF_encrypt(3ssl) | … |
| BF_cfb64_encrypt(3ssl) ↣ BF_encrypt(3ssl) | … |
| bf_compact(1) | Shell script to compact a bogofilter directory. |
| bf_compact-bdb(1) ↣ bf_compact(1) | Shell script to compact a bogofilter directory. |
| bf_compact-sqlite(1) ↣ bf_compact(1) | Shell script to compact a bogofilter directory. |
| bf_copy(1) | Shell script to copy a bogofilter working directory. |
| bf_copy-bdb(1) ↣ bf_copy(1) | Shell script to copy a bogofilter working directory. |
| bf_copy-sqlite(1) ↣ bf_copy(1) | Shell script to copy a bogofilter working directory. |
| BF_decrypt(3ssl) ↣ BF_encrypt(3ssl) | … |
| BF_ecb_encrypt(3ssl) ↣ BF_encrypt(3ssl) | … |
| BF_encrypt(3ssl) | … |
| BF_ofb64_encrypt(3ssl) ↣ BF_encrypt(3ssl) | … |
| BF_options(3ssl) ↣ BF_encrypt(3ssl) | … |
| BF_set_key(3ssl) ↣ BF_encrypt(3ssl) | … |
| bf_tar(1) | Shell script to write a tar file of a bogofilter directory to stdout. |
| bf_tar-bdb(1) ↣ bf_tar(1) | Shell script to write a tar file of a bogofilter directory to stdout. |
| bf_tar-sqlite(1) ↣ bf_tar(1) | Shell script to write a tar file of a bogofilter directory to stdout. |
| bfbtester(1) | Brute Force Binary Tester. |
| bfe(4freebsd) | Broadcom BCM4401 Ethernet Device Driver. |
| bfgminer(1) | Multi-threaded multi-pool ASIC, FPGA, GPU and CPU bitcoin miner. |
| bfs(1) | Breadth-first search for your files. |
| bg(1posix) | Run jobs in the background. |
| bg-installer(1) | Standardized installer program. |
| bg5+latex(1) ↣ cjklatex(1) | Use LaTeX directly on a Big5 encoded .tex file. |
| bg5+pdflatex(1) ↣ cjklatex(1) | Use LaTeX directly on a Big5 encoded .tex file. |
| bg5conv(1) | Convert a TeX document in Big 5 encoding into `preprocessed' form. |
| bg5latex(1) ↣ cjklatex(1) | Use LaTeX directly on a Big5 encoded .tex file. |
| bg5pdflatex(1) ↣ cjklatex(1) | Use LaTeX directly on a Big5 encoded .tex file. |
| bge(4freebsd) | Broadcom BCM57xx/BCM590x Gigabit/Fast Ethernet driver. |
| bgerror(3tcl) | Command invoked to process background errors. |
| bget(1) ↣ axgetput(1) | Upload or download files via AX.25 / axspawn Linux login session. |
| bgoffice-dict-download(1) | Download dictionaries for bgoffice. |
| bgpd(8) | A BGPv4, BGPv4+, BGPv4- routing engine for use with Quagga routing software. |
| bgpdump(1) | Translate MRT format files into readable output. |
| bgpq3(8) | Bgp filtering automation for cisco and juniper routers. |
| bgzip(1) ↣ tabix(1) | Block compression/decompression utility. |
| bhm(8) | Program to send SMTP mail to /dev/null. |
| bhnd(4freebsd) | Broadcom Home Networking Division interconnect bus. |
| bhndb(4freebsd) | Broadcom Home Networking Division interconnect bridge driver. |
| bhost(5) | LAM boot schema (host file) format. |
| bi2cf(6) | A map conversion tool for Crimson Fields. |
| biabam(1) | Biabam is a bash attachment mailer. |
| bib1-attr(7) | Bib-1 Attribute Set. |
| bib2bib(1) | Filter BibTeX data bases. |
| bib2pdf(1) | Script to convert BibTeX format files to PDF format files. |
| bib2xml(1) ↣ bibutils(1) | Bibliography conversion utilities. |
| bibclean(1) | Prettyprint and syntax check BibTeX and Scribe bibliography data base files. |
| bibcursed(1) | Manipulate BibTeX files. |
| bibdoiadd(1) | Add DOI numbers to papers in a given bib file. |
| biber(1p) | A bibtex replacement for users of biblatex. |
| Biber(3pm) | Main module for biber, a bibtex replacement for users of biblatex. |
| Biber::Annotation(3pm) | … |
| Biber::Config(3pm) | Configuration items which need to be saved across the. |
| Biber::Constants(3pm) | Global constants for biber. |
| Biber::DataList(3pm) | … |
| Biber::DataLists(3pm) | … |
| Biber::DataModel(3pm) | Biber::DataModel objects. |
| Biber::Date::Format(3pm) | … |
| Biber::Entries(3pm) | Biber::Entries objects. |
| Biber::Entry(3pm) | Biber::Entry objects. |
| Biber::Entry::Name(3pm) | Biber::Entry::Name objects. |
| Biber::Entry::Names(3pm) | Biber::Entry::Names objects. |
| Biber::Input::file::biblatexml(3pm) | Look in a BibLaTeXML file for an entry and create it if found. |
| Biber::Input::file::bibtex(3pm) | Look in a BibTeX file for an entry and create it if found. |
| Biber::Internals(3pm) | Internal methods for processing the bibliographic data. |
| Biber::LaTeX::Recode(3pm) | Encode/Decode chars to/from UTF-8/lacros in LaTeX. |
| Biber::Output::base(3pm) | Base class for Biber output modules. |
| Biber::Output::bbl(3pm) | Class for Biber output of .bbl. |
| Biber::Output::biblatexml(3pm) | Class for biblatexml output of tool mode. |
| Biber::Output::bibtex(3pm) | Class for bibtex output. |
| Biber::Output::dot(3pm) | Class for Biber output of GraphViz .dot files. |
| Biber::Output::test(3pm) | Output class for loopback testing Essentially, this outputs to a string so we can look. |
| Biber::Section(3pm) | Biber::Section objects. |
| Biber::Sections(3pm) | Biber::Sections objects. |
| Biber::UCollate(3pm) | … |
| Biber::Utils(3pm) | Various utility subs used in Biber. |
| bibhva(1) | A BibTeX wrapper for use with HeVeA. |
| biblatex2xml(1) ↣ bibutils(1) | Bibliography conversion utilities. |
| bible(1) | Lookup words and verses in the Bible (King James version). |
| bibledit(1) | Bibledit. |
| bibledit-bibletime(1) | Bibledit BibleTime helper. |
| bibledit-xiphos(1) | Bibledit Xiphos helper. |
| bibletime(1) | Bible study tool for KDE. |
| Biblio::Citation::Parser(3pm) | Citation parsing framework. |
| Biblio::Citation::Parser::Citebase(3pm) | Citebase's citation parsing module. |
| Biblio::Citation::Parser::Jiao(3pm) | Citation parsing using Zhuoan Jiao's parsing module. |
| Biblio::Citation::Parser::Jiao::Utility(3pm) | Perl module containing text processing subroutines. |
| Biblio::Citation::Parser::Standard(3pm) | Citation parsing functionality. |
| Biblio::Citation::Parser::Templates(3pm) | Citation templates collection. |
| Biblio::Citation::Parser::Utils(3pm) | OpenURL utility functions. |
| Biblio::EndnoteStyle(3pm) | Reference formatting using Endnote-like templates. |
| Biblio::Isis(3pm) | Read CDS/ISIS, WinISIS and IsisMarc database. |
| Biblio::Isis::Manual(3pm) | … |
| Biblio::Thesaurus(3pm) | Perl extension for managing ISO thesaurus. |
| bibmradd(1) | Add MR numbers to papers in a given bib file. |
| biboumi(1) | XMPP gateway to IRC. |
| bibtex(3tcl) | Parse bibtex files. |
| bibtex.original(1) | Make a bibliography for (La)TeX. |
| bibtex.pybtex(1) ↣ pybtex(1) | BibTeX-compatible bibliography processor in Python. |
| bibtex2html(1) | A translator of bibliography databases into HTML. |
| bibtex8(1) | 8-bit Big BibTeX version 0.99c. |
| bibtexconv(1) | BibTeX Converter. |
| bibtexconv-odt(1) | ODT Helper Script for BibTeX Converter. |
| bibtool(1) | BibTeX file manipulation tool. |
| biburl2doi(1) | Convert URLs pointing to doi.org to DOIs. |
| bibus(1) | Bibus is a bibliographic database. |
| bibutils(1) | Bibliography conversion utilities. |
| bibzbladd(1) | Add Zbl numbers to papers in a given bib file. |
| bidentd(8) | Bisqwit's TCP/IP Identification Protocol daemon. |
| bidiv(1) | Bidirectional text filter. |
| biff(1) | Be notified if mail arrives and who it is from. |
| Bigarray(3o) | Large, multi-dimensional, numerical arrays. |
| Bigarray.Array0(3o) | Zero-dimensional arrays. |
| Bigarray.Array1(3o) | One-dimensional arrays. |
| Bigarray.Array2(3o) | Two-dimensional arrays. |
| Bigarray.Array3(3o) | Three-dimensional arrays. |
| Bigarray.Genarray(3o) | No description. |
| bigfloat(3tcl) | Arbitrary precision floating-point numbers. |
| bigint(3bobcat) | Arithmetic on Integers of Unlimited Size. |
| bigint(3perl) | Transparent BigInteger support for Perl. |
| bignum(3perl) | Transparent BigNumber support for Perl. |
| bignum(3tcl) | Arbitrary precision integer numbers. |
| bigrat(3perl) | Transparent BigNumber/BigRational support for Perl. |
| bigvia(3) | Draws a non minimal via as a bunch of vias. |
| bihourly(8) | Track ethernet/ip address pairs. |
| bijiben(1) | An intuitive note editor integrated with GNOME 3. |
| bilibop(7) | Run Debian GNU/Linux from an external media. |
| bilibop.conf(5) | Configuration file of bilibop packages. |
| billard-gl(6) | OpenGL billiards game. |
| biloba(6) | Multiplayer strategy board game. |
| biloba-server(6) | Multiplayer strategy board game server tool. |
| bin(3trf) | Encoding "bin". |
| bin2c(1) | … |
| bin2h(1) | Converter to header file. |
| bin2obj-3.0.4(1) | The Free Pascal binary to pascal include file converter. |
| bin_dec_hex(1) | How to use binary, decimal, and hexadecimal notation. |
| binary(3erl) | Library for handling binary data. |
| binary(3tcl) | Insert and extract fields from binary strings. |
| binary2ascii(1) | Convert binary numbers to textual representation. |
| binaryring(6x) | A system of path tracing particles evolves continuously from an initial creation. |
| binarysearch(3bobcat) | Extensions to the STL binary_search function template. |
| bincat(1) | AME. |
| binclock(1) | Prints time in binary format. |
| bind(2) | Bind a name to a socket. |
| bind(2freebsd) | Assign a local protocol address to a socket. |
| bind(3posix) | Bind a name to a socket. |
| bind(3tk) | Arrange for X events to invoke Tcl scripts. |
| bind2csv2(1) | Convert zone files from BIND to MaraDNS compatible format. |
| bind9-config(1) | Get information about the installed version of ISC BIND. |
| BIND::Conf_Parser(3pm) | Parser class for BIND configuration files. |
| BIND::Config::Parser(3pm) | Parse BIND Config file. |
| bind_textdomain_codeset(3) | Set encoding of message translations. |
| bindat(2freebsd) | Assign a local protocol address to a socket. |
| bindCDKObject(3) ↣ cdk_binding(3) | Curses Development Kit Character Binding Capabilities. |
| bindechexascii(1) | Converts ASCII, binary, decimal, hexadecimal and prints results on the in screen. |
| bindfs(1) | … |
| bindresvport(3) | Bind a socket to a privileged IP port. |
| bindresvport(3t) | Bind a socket to a privileged IP port. |
| bindrules(7) | ShapeTools version bind rules. |
| bindtags(3tk) | Determine which bindings apply to a window, and order of evaluation. |
| bindtextdomain(3) | Set directory containing message catalogs. |
| binfmt.d(5) | Configure additional binary formats for executables at boot. |
| binfmtasm-interpreter(1) | Binfmt_misc Assembly handler. |
| binfmtc-interpreter(1) | Binfmt_misc C handler. |
| binfmtcxx-interpreter(1) | Binfmt_misc C++ handler. |
| binfmtf-interpreter(1) | Binfmt_misc fortran handler. |
| binfmtf95-interpreter(1) | Binfmt_misc fortran handler. |
| binfmtgcj-interpreter(1) | Binfmt_misc gcj handler. |
| bing(1sr) ↣ elvi(1sr) | Surfraw(1) search tools. |
| bing(8) | Compute point to point throughput using two sizes of ICMP ECHO_REQUEST packets to pairs of remote hosts. |
| binhex(1) | Hexifies a series of files. |
| biniax2(6) | Logic game with arcade and tactics modes. |
| binkd(8) | Transfer files between two Fidonet systems over TCP/IP. |
| binkdlogstat(8) | Binkd log analyser and statistic generator. |
| bino(1) | A 3D video player with multi-display support. |
| binops(3bobcat) | Template functions for class-type binary operators. |
| binopsbase(3bobcat) | Class template offering class-type binary operators. |
| binsrch(3WN) | General purpose functions for performing a binary search. |
| binstats(1) | Display statistics about programs and libraries. |
| bintime(9freebsd) | Get the current time. |
| binuptime(9freebsd) | Get. |
| binvox2bt(1) | Convert 3D mesh voxelizer meshes to a single bonsai tree file. |
| binwalk(1) | Tool for searching binary images for embedded files and executable code. |
| bio(7ssl) | Basic I/O abstraction. |
| bio-eagle(1) | Haplotype phasing within a genotyped cohort or using a phased reference panel. |
| bio-rainbow(1) | Manual page for rainbow 2.0.4 --. |
| Bio::Align::AlignI(3pm) | An interface for describing sequence alignments. |
| Bio::Align::DNAStatistics(3pm) | Calculate some statistics for a DNA alignment. |
| Bio::Align::Graphics(3pm) | Graphic Rendering of Bio::Align::AlignI Objects. |
| Bio::Align::PairwiseStatistics(3pm) | Base statistic object for Pairwise Alignments. |
| Bio::Align::ProteinStatistics(3pm) | Calculate Protein Alignment statistics (mostly distances). |
| Bio::Align::StatisticsI(3pm) | Calculate some statistics for an alignment. |
| Bio::Align::Utilities(3pm) | A collection of utilities regarding converting and manipulating alignment objects. |
| Bio::AlignIO(3pm) | Handler for AlignIO Formats. |
| Bio::AlignIO::arp(3pm) | ARP MSA Sequence input/output stream. |
| Bio::AlignIO::bl2seq(3pm) | Bl2seq sequence input/output stream. |
| Bio::AlignIO::clustalw(3pm) | Clustalw sequence input/output stream. |
| Bio::AlignIO::emboss(3pm) | Parse EMBOSS alignment output (from applications water and needle). |
| Bio::AlignIO::fasta(3pm) | Fasta MSA Sequence input/output stream. |
| Bio::AlignIO::Handler::GenericAlignHandler(3pm) | Bio::HandlerI-based generic data handler class for. |
| Bio::AlignIO::largemultifasta(3pm) | Largemultifasta MSA Sequence input/output stream. |
| Bio::AlignIO::maf(3pm) | Multiple Alignment Format sequence input stream. |
| Bio::AlignIO::mase(3pm) | Mase sequence input/output stream. |
| Bio::AlignIO::mega(3pm) | Parse and Create MEGA format data files. |
| Bio::AlignIO::meme(3pm) | Meme sequence input/output stream. |
| Bio::AlignIO::metafasta(3pm) | Metafasta MSA Sequence input/output stream. |
| Bio::AlignIO::msf(3pm) | Msf sequence input/output stream. |
| Bio::AlignIO::nexml(3pm) | NeXML format sequence alignment input/output stream driver. |
| Bio::AlignIO::nexus(3pm) | NEXUS format sequence input/output stream. |
| Bio::AlignIO::pfam(3pm) | Pfam sequence input/output stream. |
| Bio::AlignIO::phylip(3pm) | PHYLIP format sequence input/output stream. |
| Bio::AlignIO::po(3pm) | Po MSA Sequence input/output stream. |
| Bio::AlignIO::proda(3pm) | Proda sequence input/output stream. |
| Bio::AlignIO::prodom(3pm) | Prodom sequence input/output stream. |
| Bio::AlignIO::psi(3pm) | Read/Write PSI-BLAST profile alignment files. |
| Bio::AlignIO::selex(3pm) | Selex sequence input/output stream. |
| Bio::AlignIO::stockholm(3pm) | Stockholm sequence input/output stream. |
| Bio::AlignIO::xmfa(3pm) | XMFA MSA Sequence input/output stream. |
| Bio::AnalysisI(3pm) | An interface to any (local or remote) analysis tool. |
| Bio::AnalysisParserI(3pm) | Generic analysis output parser interface. |
| Bio::AnalysisResultI(3pm) | Interface for analysis result objects. |
| Bio::AnnotatableI(3pm) | The base interface an annotatable object must implement. |
| Bio::Annotation::AnnotationFactory(3pm) | Instantiates a new Bio::AnnotationI (or derived class) through a factory. |
| Bio::Annotation::Collection(3pm) | Default Perl implementation of AnnotationCollectionI. |
| Bio::Annotation::Comment(3pm) | A comment object, holding text. |
| Bio::Annotation::DBLink(3pm) | Untyped links between databases. |
| Bio::Annotation::OntologyTerm(3pm) | An ontology term adapted to AnnotationI. |
| Bio::Annotation::Reference(3pm) | Specialised DBLink object for Literature References. |
| Bio::Annotation::Relation(3pm) | Relationship (pairwise) with other objects SeqI and NodeI;. |
| Bio::Annotation::SimpleValue(3pm) | A simple scalar. |
| Bio::Annotation::StructuredValue(3pm) | A scalar with embedded structured information. |
| Bio::Annotation::TagTree(3pm) | AnnotationI with tree-like hierarchal key-value relationships ('structured tags'). |
| Bio::Annotation::Target(3pm) | Provides an object which represents a target (ie, a similarity hit) from one object. |
| Bio::Annotation::Tree(3pm) | Provide a tree as an annotation to a Bio::AnnotatableI object. |
| Bio::Annotation::TypeManager(3pm) | Manages types for annotation collections. |
| Bio::AnnotationCollectionI(3pm) | Interface for annotation collections. |
| Bio::AnnotationI(3pm) | Annotation interface. |
| Bio::ASN1::EntrezGene(3pm) | Regular expression-based Perl Parser for NCBI Entrez Gene. |
| Bio::ASN1::EntrezGene::Indexer(3pm) | Indexes NCBI Sequence files. |
| Bio::ASN1::Sequence(3pm) | Regular expression-based Perl Parser for ASN.1-formatted NCBI Sequences. |
| Bio::ASN1::Sequence::Indexer(3pm) | Indexes NCBI Sequence files. |
| Bio::Assembly::Contig(3pm) | Perl module to hold and manipulate. |
| Bio::Assembly::ContigAnalysis(3pm) | … |
| Bio::Assembly::IO(3pm) | Handler for Assembly::IO Formats. |
| Bio::Assembly::IO::ace(3pm) | Module to load ACE files from various assembly programs. |
| Bio::Assembly::IO::bowtie(3pm) | An IO module for assemblies in Bowtie format *BETA*. |
| Bio::Assembly::IO::maq(3pm) | Driver to read assembly files in maq format *BETA*. |
| Bio::Assembly::IO::phrap(3pm) | Driver to load phrap.out files. |
| Bio::Assembly::IO::sam(3pm) | An IO module for assemblies in Sam format *BETA*. |
| Bio::Assembly::IO::tigr(3pm) | Driver to read and write assembly files in the TIGR Assembler v2 default format. |
| Bio::Assembly::Scaffold(3pm) | Perl module to hold and manipulate sequence assembly data. |
| Bio::Assembly::ScaffoldI(3pm) | Abstract Interface of Sequence Assemblies. |
| Bio::Assembly::Singlet(3pm) | Perl module to hold and manipulate. |
| Bio::Assembly::Tools::ContigSpectrum(3pm) | Create and manipulate contig spectra. |
| Bio::Chado::NaturalDiversity::Reports(3pm) | Collection of functions for formatting Chado stock related data. |
| Bio::Chado::Schema(3pm) | A standard DBIx::Class layer for the Chado database schema. |
| Bio::Chado::Schema::Test(3pm) | Library to be used by Bio::Chado::Schema test scripts. |
| Bio::Chado::Schema::Util(3pm) | Utility functions shared by Bio::Chado::Schema objects. |
| Bio::Cluster::ClusterFactory(3pm) | Instantiates a new Bio::ClusterI (or derived class) through a factory. |
| Bio::Cluster::FamilyI(3pm) | Family Interface. |
| Bio::Cluster::SequenceFamily(3pm) | Sequence Family object. |
| Bio::Cluster::UniGene(3pm) | UniGene object. |
| Bio::Cluster::UniGeneI(3pm) | Abstract interface of UniGene object. |
| Bio::ClusterI(3pm) | Cluster Interface. |
| Bio::ClusterIO(3pm) | Handler for Cluster Formats. |
| Bio::ClusterIO::dbsnp(3pm) | DbSNP input stream. |
| Bio::ClusterIO::unigene(3pm) | UniGene input stream. |
| Bio::CodonUsage::IO(3pm) | For reading and writing codon usage tables to file. |
| Bio::CodonUsage::Table(3pm) | For access to the Codon usage Database at http://www.kazusa.or.jp/codon. |
| Bio::Coordinate(3pm) | Modules for working with biological coordinates. |
| Bio::Coordinate::Chain(3pm) | Mapping locations through a chain of coordinate mappers. |
| Bio::Coordinate::Collection(3pm) | Noncontinuous match between two coordinate sets. |
| Bio::Coordinate::ExtrapolatingPair(3pm) | Continuous match between two coordinate sets. |
| Bio::Coordinate::GeneMapper(3pm) | Transformations between gene related coordinate systems. |
| Bio::Coordinate::Graph(3pm) | Finds shortest path between nodes in a graph. |
| Bio::Coordinate::MapperI(3pm) | Interface describing coordinate mappers. |
| Bio::Coordinate::Pair(3pm) | Continuous match between two coordinate sets. |
| Bio::Coordinate::Result(3pm) | Results from coordinate transformation. |
| Bio::Coordinate::Result::Gap(3pm) | Another name for Bio::Location::Simple. |
| Bio::Coordinate::Result::Match(3pm) | Another name for Bio::Location::Simple. |
| Bio::Coordinate::ResultI(3pm) | Interface to identify coordinate mapper results. |
| Bio::Coordinate::Utils(3pm) | Additional methods to create Bio::Coordinate objects. |
| Bio::Das::FeatureTypeI(3pm) | Simple interface to Sequence Ontology feature types. |
| Bio::Das::Lite(3pm) | Perl extension for the DAS (HTTP+XML) Protocol (http://biodas.org/). |
| Bio::Das::SegmentI(3pm) | DAS-style access to a feature database. |
| Bio::DasI(3pm) | DAS-style access to a feature database. |
| Bio::DB::Ace(3pm) | Database object interface to ACeDB servers. |
| Bio::DB::Bam::Alignment(3pm) | … |
| Bio::DB::Bam::AlignWrapper(3pm) | … |
| Bio::DB::Bam::Pileup(3pm) | … |
| Bio::DB::Bam::PileupWrapper(3pm) | … |
| Bio::DB::Bam::Query(3pm) | … |
| Bio::DB::Bam::Target(3pm) | … |
| Bio::DB::BioFetch(3pm) | Database object interface to BioFetch retrieval. |
| Bio::DB::CUTG(3pm) | For access to the Codon usage Database at http://www.kazusa.or.jp/codon. |
| Bio::DB::DBFetch(3pm) | Database object for retrieving using the dbfetch script. |
| Bio::DB::EMBL(3pm) | Database object interface for EMBL entry retrieval. |
| Bio::DB::EntrezGene(3pm) | Database object interface to Entrez Gene. |
| Bio::DB::ESoap(3pm) | Client for the NCBI Entrez EUtilities SOAP server. |
| Bio::DB::ESoap::WSDL(3pm) | WSDL parsing for Entrez SOAP EUtilities. |
| Bio::DB::EUtilities(3pm) | Webagent which interacts with and retrieves data from NCBI's eUtils. |
| Bio::DB::Expression(3pm) | DESCRIPTION of Object. |
| Bio::DB::Expression::geo(3pm) | *** DESCRIPTION of Class. |
| Bio::DB::Failover(3pm) | A Bio::DB::RandomAccessI compliant class which wraps a prioritized list of DBs. |
| Bio::DB::Fasta(3pm) | Fast indexed access to fasta files. |
| Bio::DB::FileCache(3pm) | In file cache for BioSeq objects. |
| Bio::DB::Flat(3pm) | Interface for indexed flat files. |
| Bio::DB::Flat::BDB(3pm) | Interface for BioHackathon standard BDB-indexed flat file. |
| Bio::DB::Flat::BDB::embl(3pm) | Embl adaptor for Open-bio standard BDB-indexed flat file. |
| Bio::DB::Flat::BDB::fasta(3pm) | Fasta adaptor for Open-bio standard BDB-indexed flat file. |
| Bio::DB::Flat::BDB::genbank(3pm) | Genbank adaptor for Open-bio standard BDB-indexed flat file. |
| Bio::DB::Flat::BDB::swiss(3pm) | Swissprot adaptor for Open-bio standard BDB-indexed flat file. |
| Bio::DB::Flat::BinarySearch(3pm) | BinarySearch search indexing system for sequence files. |
| Bio::DB::GenBank(3pm) | Database object interface to GenBank. |
| Bio::DB::GenericWebAgent(3pm) | Helper base class for parameter-based remote server access and response retrieval. |
| Bio::DB::GenPept(3pm) | Database object interface to GenPept. |
| Bio::DB::GFF(3pm) | … |
| Bio::DB::GFF::Adaptor::ace(3pm) | … |
| Bio::DB::GFF::Adaptor::berkeleydb(3pm) | … |
| Bio::DB::GFF::Adaptor::berkeleydb::iterator(3pm) | Iterator for Bio::DB::GFF::Adaptor::berkeleydb. |
| Bio::DB::GFF::Adaptor::biofetch(3pm) | … |
| Bio::DB::GFF::Adaptor::biofetch_oracle(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::caching_handle(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::iterator(3pm) | Iterator for Bio::DB::GFF::Adaptor::dbi. |
| Bio::DB::GFF::Adaptor::dbi::mysql(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::mysqlace(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::mysqlcmap(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::mysqlopt(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::oracle(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::oracleace(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::pg(3pm) | … |
| Bio::DB::GFF::Adaptor::dbi::pg_fts(3pm) | … |
| Bio::DB::GFF::Adaptor::memory(3pm) | … |
| Bio::DB::GFF::Adaptor::memory::feature_serializer(3pm) | Utility methods for serializing and deserializing GFF. |
| Bio::DB::GFF::Adaptor::memory::iterator(3pm) | Iterator for Bio::DB::GFF::Adaptor::memory. |
| Bio::DB::GFF::Aggregator(3pm) | … |
| Bio::DB::GFF::Aggregator::alignment(3pm) | … |
| Bio::DB::GFF::Aggregator::clone(3pm) | … |
| Bio::DB::GFF::Aggregator::coding(3pm) | … |
| Bio::DB::GFF::Aggregator::gene(3pm) | … |
| Bio::DB::GFF::Aggregator::match(3pm) | … |
| Bio::DB::GFF::Aggregator::match_gap(3pm) | … |
| Bio::DB::GFF::Aggregator::none(3pm) | … |
| Bio::DB::GFF::Aggregator::orf(3pm) | … |
| Bio::DB::GFF::Aggregator::processed_transcript(3pm) | … |
| Bio::DB::GFF::Aggregator::reftranscript(3pm) | … |
| Bio::DB::GFF::Aggregator::so_transcript(3pm) | … |
| Bio::DB::GFF::Aggregator::transcript(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_acembly(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_ensgene(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_genscan(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_refgene(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_sanger22(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_sanger22pseudo(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_softberry(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_twinscan(3pm) | … |
| Bio::DB::GFF::Aggregator::ucsc_unigene(3pm) | … |
| Bio::DB::GFF::Aggregator::waba_alignment(3pm) | … |
| Bio::DB::GFF::Aggregator::wormbase_gene(3pm) | … |
| Bio::DB::GFF::Featname(3pm) | … |
| Bio::DB::GFF::Feature(3pm) | … |
| Bio::DB::GFF::Homol(3pm) | … |
| Bio::DB::GFF::RelSegment(3pm) | … |
| Bio::DB::GFF::Segment(3pm) | … |
| Bio::DB::GFF::Typename(3pm) | … |
| Bio::DB::GFF::Util::Binning(3pm) | Binning utility for Bio::DB::GFF index. |
| Bio::DB::GFF::Util::Rearrange(3pm) | Rearrange utility. |
| Bio::DB::HIV(3pm) | Database object interface to the Los Alamos HIV Sequence Database. |
| Bio::DB::HIV::HIVAnnotProcessor(3pm) | Adds HIV-specific annotations to Bio::SeqIO streams. |
| Bio::DB::HIV::HIVQueryHelper(3pm) | Routines and packages used by Bio::DB::HIV and Bio::DB::Query::HIVQuery. |
| Bio::DB::IndexedBase(3pm) | Base class for modules using indexed sequence files. |
| Bio::DB::InMemoryCache(3pm) | Abstract interface for a sequence database. |
| Bio::DB::LocationI(3pm) | A RandomAccessI-like abstract interface for retrieving location data from a sequence. |
| Bio::DB::MeSH(3pm) | Term retrieval from a Web MeSH database. |
| Bio::DB::NCBIHelper(3pm) | A collection of routines useful for queries to NCBI databases. |
| Bio::DB::Qual(3pm) | Fast indexed access to quality files. |
| Bio::DB::Query::GenBank(3pm) | Build a GenBank Entrez Query. |
| Bio::DB::Query::HIVQuery(3pm) | Query interface to the Los Alamos HIV Sequence Database. |
| Bio::DB::Query::WebQuery(3pm) | Helper class for web-based sequence queryies. |
| Bio::DB::QueryI(3pm) | Object Interface to queryable sequence databases. |
| Bio::DB::RandomAccessI(3pm) | Abstract interface for a sequence database. |
| Bio::DB::ReferenceI(3pm) | A RandomAccessI-like abstract interface for retrieving Reference data from a sequence. |
| Bio::DB::RefSeq(3pm) | Database object interface for RefSeq retrieval. |
| Bio::DB::Registry(3pm) | Access to the Open Bio Database Access registry scheme. |
| Bio::DB::Sam(3pm) | … |
| Bio::DB::Sam::Constants(3pm) | … |
| Bio::DB::SeqFeature(3pm) | … |
| Bio::DB::SeqFeature::NormalizedFeature(3pm) | … |
| Bio::DB::SeqFeature::NormalizedFeatureI(3pm) | … |
| Bio::DB::SeqFeature::NormalizedTableFeatureI(3pm) | … |
| Bio::DB::SeqFeature::Segment(3pm) | … |
| Bio::DB::SeqFeature::Store(3pm) | … |
| Bio::DB::SeqFeature::Store::Alias(3pm) | … |
| Bio::DB::SeqFeature::Store::bdb(3pm) | Fetch and store objects from a BerkeleyDB. |
| Bio::DB::SeqFeature::Store::berkeleydb(3pm) | … |
| Bio::DB::SeqFeature::Store::berkeleydb3(3pm) | … |
| Bio::DB::SeqFeature::Store::DBI::Iterator(3pm) | Utility methods for creating and iterating over SeqFeature records. |
| Bio::DB::SeqFeature::Store::DBI::mysql(3pm) | … |
| Bio::DB::SeqFeature::Store::DBI::Pg(3pm) | … |
| Bio::DB::SeqFeature::Store::DBI::SQLite(3pm) | … |
| Bio::DB::SeqFeature::Store::FeatureFileLoader(3pm) | … |
| Bio::DB::SeqFeature::Store::GFF2Loader(3pm) | … |
| Bio::DB::SeqFeature::Store::GFF3Loader(3pm) | … |
| Bio::DB::SeqFeature::Store::Loader(3pm) | … |
| Bio::DB::SeqFeature::Store::LoadHelper(3pm) | … |
| Bio::DB::SeqFeature::Store::memory(3pm) | … |
| Bio::DB::SeqI(3pm) | Abstract Interface for Sequence databases. |
| Bio::DB::SeqVersion(3pm) | Front end to querying databases for identifier versions. |
| Bio::DB::SeqVersion::gi(3pm) | Interface to NCBI Sequence Revision History page. |
| Bio::DB::SoapEUtilities(3pm) | Interface to the NCBI Entrez web service *BETA*. |
| Bio::DB::SoapEUtilities::DocSumAdaptor(3pm) | Handle for Entrez SOAP DocSums. |
| Bio::DB::SoapEUtilities::FetchAdaptor(3pm) | Conversion of Entrez SOAP messages to BioPerl objects. |
| Bio::DB::SoapEUtilities::FetchAdaptor::seq(3pm) | Fetch adaptor for 'seq' efetch SOAP messages. |
| Bio::DB::SoapEUtilities::FetchAdaptor::species(3pm) | Fetch adaptor for 'taxonomy' efetch SOAP messages. |
| Bio::DB::SoapEUtilities::GQueryAdaptor(3pm) | Handle for Entrez SOAP GlobalQuery items. |
| Bio::DB::SoapEUtilities::LinkAdaptor(3pm) | Handle for Entrez SOAP LinkSets. |
| Bio::DB::SoapEUtilities::Result(3pm) | Accessor object for SoapEUtilities results. |
| Bio::DB::SwissProt(3pm) | Database object interface to SwissProt retrieval. |
| Bio::DB::Tagger(3pm) | … |
| Bio::DB::Tagger::Tag(3pm) | … |
| Bio::DB::Taxonomy(3pm) | Access to a taxonomy database. |
| Bio::DB::Taxonomy::entrez(3pm) | Taxonomy Entrez driver. |
| Bio::DB::Taxonomy::flatfile(3pm) | Use the NCBI taxonomy from local indexed flat files. |
| Bio::DB::Taxonomy::greengenes(3pm) | Use the Greengenes taxonomy. |
| Bio::DB::Taxonomy::list(3pm) | An implementation of Bio::DB::Taxonomy that accepts lists of words to build a. |
| Bio::DB::Taxonomy::silva(3pm) | Use the Silva taxonomy. |
| Bio::DB::Taxonomy::sqlite(3pm) | SQLite-based implementation of Bio::DB::Taxonomy::flatfile. |
| Bio::DB::TFBS(3pm) | Access to a Transcription Factor Binding Site database. |
| Bio::DB::TFBS::transfac_pro(3pm) | An implementation of Bio::DB::TFBS which uses local flat files for transfac pro. |
| Bio::DB::Universal(3pm) | Artificial database that delegates to specific databases. |
| Bio::DB::UpdateableSeqI(3pm) | An interface for writing to a database of sequences. |
| Bio::DB::WebDBSeqI(3pm) | Object Interface to generalize Web Databases for retrieving sequences. |
| Bio::DBLinkContainerI(3pm) | Abstract interface for any object wanting to use. |
| Bio::DescribableI(3pm) | Interface for objects with human readable names and descriptions. |
| Bio::Draw::Pictogram(3pm) | Generate SVG output of Pictogram display for consensus motifs. |
| Bio::Event::EventGeneratorI(3pm) | This interface describes the basic event generator class. |
| Bio::Event::EventHandlerI(3pm) | An Event Handler Interface. |
| Bio::Factory::AnalysisI(3pm) | An interface to analysis tool factory. |
| Bio::Factory::ApplicationFactoryI(3pm) | Interface class for Application Factories. |
| Bio::Factory::DriverFactory(3pm) | Base class for factory classes loading drivers. |
| Bio::Factory::EMBOSS(3pm) | EMBOSS application factory class. |
| Bio::Factory::FTLocationFactory(3pm) | A FeatureTable Location Parser. |
| Bio::Factory::LocationFactoryI(3pm) | A factory interface for generating locations from a string. |
| Bio::Factory::MapFactoryI(3pm) | A Factory for getting markers. |
| Bio::Factory::ObjectBuilderI(3pm) | Interface for an object builder. |
| Bio::Factory::ObjectFactory(3pm) | Instantiates a new Bio::Root::RootI (or derived class) through a factory. |
| Bio::Factory::ObjectFactoryI(3pm) | A General object creator factory. |
| Bio::Factory::SeqAnalysisParserFactory(3pm) | Class capable of creating SeqAnalysisParserI compliant parsers. |
| Bio::Factory::SeqAnalysisParserFactoryI(3pm) | Interface describing objects capable. |
| Bio::Factory::SequenceFactoryI(3pm) | This interface allows for generic building of sequences in factories which. |
| Bio::Factory::SequenceProcessorI(3pm) | Interface for chained sequence. |
| Bio::Factory::SequenceStreamI(3pm) | Interface describing the basics of a Sequence Stream. |
| Bio::Factory::TreeFactoryI(3pm) | Factory Interface for getting and writing trees. |
| Bio::FeatureHolderI(3pm) | The base interface an object with features must implement. |
| Bio::Graphics(3pm) | Generate GD images of Bio::Seq objects. |
| Bio::Graphics::Browser2::AuthorizedFeatureFile(3pm) | … |
| Bio::Graphics::Browser2::CAlign(3pm) | Compiled helper for Bio::Graphics::Browser::Realign. |
| Bio::Graphics::Browser2::DataBase(3pm) | … |
| Bio::Graphics::Browser2::DataLoader::archive(3pm) | Data loader for archives of BigWig files. |
| Bio::Graphics::Browser2::DataLoader::useq(3pm) | Data loader for the USeq archive. |
| Bio::Graphics::Browser2::DataSource(3pm) | … |
| Bio::Graphics::Browser2::GFFhelper(3pm) | … |
| Bio::Graphics::Browser2::Markup(3pm) | Markup routines for sequences in text form. |
| Bio::Graphics::Browser2::OptionPick(3pm) | … |
| Bio::Graphics::Browser2::PadAlignment(3pm) | Insert pads into a multiple alignment. |
| Bio::Graphics::Browser2::Plugin(3pm) | … |
| Bio::Graphics::Browser2::Plugin::AuthPlugin(3pm) | … |
| Bio::Graphics::Browser2::PluginSet(3pm) | … |
| Bio::Graphics::Browser2::Realign(3pm) | Perl extension for Smith-Waterman alignments. |
| Bio::Graphics::Browser2::Region(3pm) | … |
| Bio::Graphics::Browser2::RegionSearch(3pm) | … |
| Bio::Graphics::Browser2::RemoteSet(3pm) | … |
| Bio::Graphics::Browser2::Render(3pm) | … |
| Bio::Graphics::Browser2::Render::Slave::AWS_Balancer(3pm) | … |
| Bio::Graphics::Browser2::Render::Slave::Status(3pm) | … |
| Bio::Graphics::Browser2::RenderPanels(3pm) | … |
| Bio::Graphics::Browser2::Util(3pm) | … |
| Bio::Graphics::ConfiguratorI(3pm) | A sectioned map of configuration options (a map of maps), with a default. |
| Bio::Graphics::DrawTransmembrane(3pm) | Draw a cartoon of an Alpha-helical transmembrane protein. |
| Bio::Graphics::Feature(3pm) | A simple feature object for use with Bio::Graphics::Panel. |
| Bio::Graphics::FeatureBase(3pm) | Compatibility module. |
| Bio::Graphics::FeatureDir(3pm) | … |
| Bio::Graphics::FeatureFile(3pm) | … |
| Bio::Graphics::FeatureFile::Iterator(3pm) | … |
| Bio::Graphics::Glyph(3pm) | Base class for Bio::Graphics::Glyph objects. |
| Bio::Graphics::Glyph::alignment(3pm) | The "alignment" glyph. |
| Bio::Graphics::Glyph::allele_tower(3pm) | The "allele_tower" glyph. |
| Bio::Graphics::Glyph::anchored_arrow(3pm) | The "anchored_arrow" glyph. |
| Bio::Graphics::Glyph::arrow(3pm) | The "arrow" glyph. |
| Bio::Graphics::Glyph::box(3pm) | The "box" glyph. |
| Bio::Graphics::Glyph::broken_line(3pm) | The "broken line" glyph. |
| Bio::Graphics::Glyph::cds(3pm) | The "cds" glyph. |
| Bio::Graphics::Glyph::christmas_arrow(3pm) | The "christmas arrow" glyph. |
| Bio::Graphics::Glyph::crossbox(3pm) | The "crossbox" glyph. |
| Bio::Graphics::Glyph::dashed_line(3pm) | The "dashed line" glyph. |
| Bio::Graphics::Glyph::decorated_gene(3pm) | A GFF3-compatible gene glyph with protein decorations. |
| Bio::Graphics::Glyph::decorated_transcript(3pm) | Draws processed transcript with protein decorations. |
| Bio::Graphics::Glyph::diamond(3pm) | The "diamond" glyph. |
| Bio::Graphics::Glyph::dna(3pm) | The "dna" glyph. |
| Bio::Graphics::Glyph::dot(3pm) | The "dot" glyph. |
| Bio::Graphics::Glyph::dumbbell(3pm) | A glyph that draws a "dumbbell" with the same shapes on both ends. |
| Bio::Graphics::Glyph::ellipse(3pm) | The "ellipse" glyph. |
| Bio::Graphics::Glyph::ex(3pm) | The "ex", or "crossed box" glyph. |
| Bio::Graphics::Glyph::extending_arrow(3pm) | … |
| Bio::Graphics::Glyph::Factory(3pm) | Factory for Bio::Graphics::Glyph objects. |
| Bio::Graphics::Glyph::fb_shmiggle(3pm) | … |
| Bio::Graphics::Glyph::fixedwidth(3pm) | A base class fixed width glyphs. |
| Bio::Graphics::Glyph::flag(3pm) | The "flag" glyph. |
| Bio::Graphics::Glyph::gene(3pm) | A GFF3-compatible gene glyph. |
| Bio::Graphics::Glyph::generic(3pm) | The "generic" glyph. |
| Bio::Graphics::Glyph::graded_segments(3pm) | The "graded_segments" glyph. |
| Bio::Graphics::Glyph::group(3pm) | The "group" glyph. |
| Bio::Graphics::Glyph::hat(3pm) | The "hat" glyph. |
| Bio::Graphics::Glyph::heat_map(3pm) | The "heat_map" glyph. |
| Bio::Graphics::Glyph::heat_map_ideogram(3pm) | The "heat_map_ideogram" glyph. |
| Bio::Graphics::Glyph::heterogeneous_segments(3pm) | The "heterogeneous_segments" glyph. |
| Bio::Graphics::Glyph::hidden(3pm) | The "hidden" glyph. |
| Bio::Graphics::Glyph::hybrid_plot(3pm) | An xyplot plot drawing dual graph using data from two or more wiggle files. |
| Bio::Graphics::Glyph::ideogram(3pm) | The "ideogram" glyph. |
| Bio::Graphics::Glyph::image(3pm) | A glyph that draws photographs & other images. |
| Bio::Graphics::Glyph::lightning(3pm) | The "lightning" glyph. |
| Bio::Graphics::Glyph::line(3pm) | The "line" glyph. |
| Bio::Graphics::Glyph::merge_parts(3pm) | A base class which suppors semantic zooming of scored alignment features. |
| Bio::Graphics::Glyph::merged_alignment(3pm) | The "merged_alignment" glyph. |
| Bio::Graphics::Glyph::minmax(3pm) | The minmax glyph. |
| Bio::Graphics::Glyph::operon(3pm) | The "polycistronic operon" glyph. |
| Bio::Graphics::Glyph::oval(3pm) | The "oval" glyph. |
| Bio::Graphics::Glyph::pairplot(3pm) | The "pairwise plot" glyph. |
| Bio::Graphics::Glyph::pentagram(3pm) | The "pentagram" glyph. |
| Bio::Graphics::Glyph::phylo_align(3pm) | The "phylogenetic alignment" glyph. |
| Bio::Graphics::Glyph::pinsertion(3pm) | The "Drosophila P-element Insertion" glyph. |
| Bio::Graphics::Glyph::primers(3pm) | The "STS primers" glyph. |
| Bio::Graphics::Glyph::processed_transcript(3pm) | The sequence ontology transcript glyph. |
| Bio::Graphics::Glyph::protein(3pm) | The "protein" glyph. |
| Bio::Graphics::Glyph::ragged_ends(3pm) | The "ragged ends" glyph. |
| Bio::Graphics::Glyph::rainbow_gene(3pm) | A GFF3-compatible gene glyph. |
| Bio::Graphics::Glyph::redgreen_box(3pm) | The "redgreen_box" glyph. |
| Bio::Graphics::Glyph::redgreen_segment(3pm) | The "redgreen_segments" glyph. |
| Bio::Graphics::Glyph::repeating_shape(3pm) | A glyph that draws the same shape repeatedly. |
| Bio::Graphics::Glyph::rndrect(3pm) | The "round rect" glyph. |
| Bio::Graphics::Glyph::ruler_arrow(3pm) | Glyph for drawing an arrow as ruler (5' and 3' are marked as label). |
| Bio::Graphics::Glyph::saw_teeth(3pm) | The "saw teeth" glyph. |
| Bio::Graphics::Glyph::scale(3pm) | The "scale" glyph. |
| Bio::Graphics::Glyph::segmented_keyglyph(3pm) | The "segmented_keyglyph" glyph. |
| Bio::Graphics::Glyph::segments(3pm) | The "segments" glyph. |
| Bio::Graphics::Glyph::so_transcript(3pm) | The sequence ontology transcript glyph. |
| Bio::Graphics::Glyph::span(3pm) | The "span" glyph. |
| Bio::Graphics::Glyph::spectrogram(3pm) | The "spectrogram" glyph. |
| Bio::Graphics::Glyph::splice_site(3pm) | The "splice_site" glyph. |
| Bio::Graphics::Glyph::stackedplot(3pm) | The stackedplot glyph. |
| Bio::Graphics::Glyph::ternary_plot(3pm) | Draw ternary plot data. |
| Bio::Graphics::Glyph::text_in_box(3pm) | The "text in box" glyph. |
| Bio::Graphics::Glyph::three_letters(3pm) | DAS-compatible package to use for drawing a line of groups of three. |
| Bio::Graphics::Glyph::tic_tac_toe(3pm) | The "tic-tac-toe" glyph. |
| Bio::Graphics::Glyph::toomany(3pm) | The "too many to show" glyph. |
| Bio::Graphics::Glyph::trace(3pm) | A glyph that visualizes a trace file. |
| Bio::Graphics::Glyph::track(3pm) | The "track" glyph. |
| Bio::Graphics::Glyph::transcript(3pm) | The "transcript" glyph. |
| Bio::Graphics::Glyph::transcript2(3pm) | The "transcript2" glyph. |
| Bio::Graphics::Glyph::translation(3pm) | The "6-frame translation" glyph. |
| Bio::Graphics::Glyph::triangle(3pm) | The "triangle" glyph. |
| Bio::Graphics::Glyph::two_bolts(3pm) | The "two bolts" glyph. |
| Bio::Graphics::Glyph::vista_plot(3pm) | The "vista_plot" glyph. |
| Bio::Graphics::Glyph::wave(3pm) | The "wave" glyph. |
| Bio::Graphics::Glyph::weighted_arrow(3pm) | The "weighted arrow" glyph. |
| Bio::Graphics::Glyph::whiskerplot(3pm) | The whiskerplot glyph. |
| Bio::Graphics::Glyph::wiggle_box(3pm) | A generic box glyph compatible with dense "wig"data. |
| Bio::Graphics::Glyph::wiggle_density(3pm) | A density plot compatible with dense "wig"data. |
| Bio::Graphics::Glyph::wiggle_xyplot(3pm) | An xyplot plot compatible with dense "wig"data. |
| Bio::Graphics::Glyph::xyplot(3pm) | The xyplot glyph. |
| Bio::Graphics::Panel(3pm) | Generate GD images of Bio::Seq objects. |
| Bio::Graphics::Pictogram(3pm) | Generate SVG output of Pictogram display for consensus motifs. |
| Bio::Graphics::RendererI(3pm) | A renderer for the Bio::Graphics class that renders Bio::SeqFeature::CollectionI. |
| Bio::Graphics::Util(3pm) | Non-object-oriented utilities used in Bio::Graphics modules. |
| Bio::Graphics::Wiggle(3pm) | … |
| Bio::Graphics::Wiggle::Loader(3pm) | … |
| Bio::HandlerBaseI(3pm) | Interface class for handler methods which interact with any event-driven parsers. |
| Bio::IdCollectionI(3pm) | Interface for objects with multiple identifiers. |
| Bio::IdentifiableI(3pm) | Interface for objects with identifiers. |
| Bio::Index::Abstract(3pm) | Abstract interface for indexing a flat file. |
| Bio::Index::AbstractSeq(3pm) | Base class for AbstractSeq. |
| Bio::Index::Blast(3pm) | Indexes Blast reports and supports retrieval based on query accession(s). |
| Bio::Index::BlastTable(3pm) | Indexes tabular Blast reports (-m 8 or -m 9 format) and supports retrieval based on. |
| Bio::Index::EMBL(3pm) | Interface for indexing (multiple) EMBL/Swissprot .dat files (i.e. flat file EMBL/Swissprot. |
| Bio::Index::Fasta(3pm) | Interface for indexing (multiple) fasta files. |
| Bio::Index::Fastq(3pm) | Interface for indexing (multiple) fastq files. |
| Bio::Index::GenBank(3pm) | Interface for indexing one or more GenBank files (i.e. flat file GenBank format). |
| Bio::Index::Hmmer(3pm) | Indexes HMMER reports and supports retreival based on query. |
| Bio::Index::Qual(3pm) | Interface for indexing (multiple) fasta qual files. |
| Bio::Index::Stockholm(3pm) | Interface for indexing Stockholm files. |
| Bio::Index::SwissPfam(3pm) | Interface for indexing swisspfam files. |
| Bio::Index::Swissprot(3pm) | Interface for indexing one or more Swissprot files. |
| Bio::Installer::Clustalw(3pm) | DESCRIPTION of Object. |
| Bio::Installer::EMBOSS(3pm) | DESCRIPTION of Object. |
| Bio::Installer::Generic(3pm) | DESCRIPTION of Object. |
| Bio::Installer::Hyphy(3pm) | DESCRIPTION of Object. |
| Bio::Installer::Muscle(3pm) | DESCRIPTION of Object. |
| Bio::Installer::PAML(3pm) | DESCRIPTION of Object. |
| Bio::Installer::Probcons(3pm) | DESCRIPTION of Object. |
| Bio::Installer::SLR(3pm) | DESCRIPTION of Object. |
| Bio::Installer::TCoffee(3pm) | DESCRIPTION of Object. |
| Bio::LiveSeq::AARange(3pm) | AARange abstract class for LiveSeq. |
| Bio::LiveSeq::Chain(3pm) | DoubleChain DataStructure for Perl. |
| Bio::LiveSeq::ChainI(3pm) | Double linked chain data structure. |
| Bio::LiveSeq::DNA(3pm) | DNA object for LiveSeq. |
| Bio::LiveSeq::Exon(3pm) | Range abstract class for LiveSeq. |
| Bio::LiveSeq::Gene(3pm) | Range abstract class for LiveSeq. |
| Bio::LiveSeq::Intron(3pm) | Range abstract class for LiveSeq. |
| Bio::LiveSeq::IO::BioPerl(3pm) | Loader for LiveSeq from EMBL entries with BioPerl. |
| Bio::LiveSeq::IO::Loader(3pm) | Parent Loader for LiveSeq. |
| Bio::LiveSeq::Mutation(3pm) | Mutation event descriptor class. |
| Bio::LiveSeq::Mutator(3pm) | Package mutating LiveSequences. |
| Bio::LiveSeq::Prim_Transcript(3pm) | Prim_Transcript class for LiveSeq. |
| Bio::LiveSeq::Range(3pm) | Range abstract class for LiveSeq. |
| Bio::LiveSeq::Repeat_Region(3pm) | Repeat_Region class for LiveSeq. |
| Bio::LiveSeq::Repeat_Unit(3pm) | Repeat_Unit class for LiveSeq. |
| Bio::LiveSeq::SeqI(3pm) | Abstract sequence interface class for LiveSeq. |
| Bio::LiveSeq::Transcript(3pm) | Transcript class for LiveSeq. |
| Bio::LiveSeq::Translation(3pm) | Translation class for LiveSeq. |
| Bio::LocatableSeq(3pm) | A Bio::PrimarySeq object with start/end points on it that can be projected into a MSA or. |
| Bio::Location::Atomic(3pm) | Implementation of a Atomic Location on a Sequence. |
| Bio::Location::AvWithinCoordPolicy(3pm) | Class implementing Bio::Location::CoordinatePolicy as the average for. |
| Bio::Location::CoordinatePolicyI(3pm) | Abstract interface for objects implementing a certain policy of computing. |
| Bio::Location::Fuzzy(3pm) | Implementation of a Location on a Sequence which has unclear start and/or end locations. |
| Bio::Location::FuzzyLocationI(3pm) | Abstract interface of a Location on a Sequence which has unclear start/end. |
| Bio::Location::NarrowestCoordPolicy(3pm) | Class implementing Bio::Location::CoordinatePolicy as the narrowest. |
| Bio::Location::Simple(3pm) | Implementation of a Simple Location on a Sequence. |
| Bio::Location::Split(3pm) | Implementation of a Location on a Sequence which has multiple locations (start/end. |
| Bio::Location::SplitLocationI(3pm) | Abstract interface of a Location on a Sequence which has multiple locations. |
| Bio::Location::WidestCoordPolicy(3pm) | Class implementing Bio::Location::CoordinatePolicy as the widest possible. |
| Bio::LocationI(3pm) | Abstract interface of a Location on a Sequence. |
| Bio::MAGE(3pm) | Container module for classes in the MAGE package: MAGE. |
| Bio::MAGE::Array(3pm) | Container module for classes in the MAGE package: Array. |
| Bio::MAGE::Array::Array(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::ArrayGroup(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::ArrayManufacture(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::ArrayManufactureDeviation(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::FeatureDefect(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::Fiducial(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::ManufactureLIMS(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::ManufactureLIMSBiomaterial(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::PositionDelta(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Array::ZoneDefect(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign(3pm) | Container module for classes in the MAGE package: ArrayDesign. |
| Bio::MAGE::ArrayDesign::ArrayDesign(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::CompositeGroup(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::DesignElementGroup(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::FeatureGroup(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::PhysicalArrayDesign(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::ReporterGroup(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::Zone(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::ZoneGroup(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::ArrayDesign::ZoneLayout(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Association(3pm) | … |
| Bio::MAGE::AuditAndSecurity(3pm) | Container module for classes in the MAGE package: AuditAndSecurity. |
| Bio::MAGE::AuditAndSecurity::Audit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::AuditAndSecurity::Contact(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::AuditAndSecurity::Organization(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::AuditAndSecurity::Person(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::AuditAndSecurity::Security(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::AuditAndSecurity::SecurityGroup(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Base(3pm) | Generic base class. |
| Bio::MAGE::BioAssay(3pm) | Container module for classes in the MAGE package: BioAssay. |
| Bio::MAGE::BioAssay::BioAssay(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::BioAssayCreation(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::BioAssayTreatment(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::Channel(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::DerivedBioAssay(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::FeatureExtraction(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::Hybridization(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::Image(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::ImageAcquisition(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::MeasuredBioAssay(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssay::PhysicalBioAssay(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData(3pm) | Container module for classes in the MAGE package: BioAssayData. |
| Bio::MAGE::BioAssayData::BioAssayData(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::BioAssayDatum(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::BioAssayDimension(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::BioAssayMap(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::BioAssayMapping(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::BioDataCube(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::BioDataTuples(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::BioDataValues(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::CompositeSequenceDimension(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::DerivedBioAssayData(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::DesignElementDimension(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::DesignElementMap(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::DesignElementMapping(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::FeatureDimension(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::MeasuredBioAssayData(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::QuantitationTypeDimension(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::QuantitationTypeMap(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::QuantitationTypeMapping(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::ReporterDimension(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioAssayData::Transformation(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioEvent(3pm) | Container module for classes in the MAGE package: BioEvent. |
| Bio::MAGE::BioEvent::BioEvent(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioEvent::Map(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial(3pm) | Container module for classes in the MAGE package: BioMaterial. |
| Bio::MAGE::BioMaterial::BioMaterial(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial::BioMaterialMeasurement(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial::BioSample(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial::BioSource(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial::Compound(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial::CompoundMeasurement(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial::LabeledExtract(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioMaterial::Treatment(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioSequence(3pm) | Container module for classes in the MAGE package: BioSequence. |
| Bio::MAGE::BioSequence::BioSequence(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioSequence::SeqFeature(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioSequence::SeqFeatureLocation(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BioSequence::SequencePosition(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::BQS(3pm) | Container module for classes in the MAGE package: BQS. |
| Bio::MAGE::BQS::BibliographicReference(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Describable(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Description(3pm) | Container module for classes in the MAGE package: Description. |
| Bio::MAGE::Description::Database(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Description::DatabaseEntry(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Description::Description(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Description::ExternalReference(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Description::OntologyEntry(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement(3pm) | Container module for classes in the MAGE package: DesignElement. |
| Bio::MAGE::DesignElement::CompositeCompositeMap(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::CompositePosition(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::CompositeSequence(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::DesignElement(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::Feature(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::FeatureInformation(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::FeatureLocation(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::FeatureReporterMap(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::MismatchInformation(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::Position(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::Reporter(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::ReporterCompositeMap(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::DesignElement::ReporterPosition(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Experiment(3pm) | Container module for classes in the MAGE package: Experiment. |
| Bio::MAGE::Experiment::Experiment(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Experiment::ExperimentalFactor(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Experiment::ExperimentDesign(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Experiment::FactorValue(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Extendable(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::HigherLevelAnalysis(3pm) | Container module for classes in the MAGE package: HigherLevelAnalysis. |
| Bio::MAGE::HigherLevelAnalysis::BioAssayDataCluster(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::HigherLevelAnalysis::Node(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::HigherLevelAnalysis::NodeContents(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::HigherLevelAnalysis::NodeValue(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Identifiable(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement(3pm) | Container module for classes in the MAGE package: Measurement. |
| Bio::MAGE::Measurement::ConcentrationUnit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::DistanceUnit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::MassUnit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::Measurement(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::QuantityUnit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::TemperatureUnit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::TimeUnit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::Unit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Measurement::VolumeUnit(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::NameValueType(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol(3pm) | Container module for classes in the MAGE package: Protocol. |
| Bio::MAGE::Protocol::Hardware(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::HardwareApplication(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::Parameter(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::Parameterizable(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::ParameterizableApplication(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::ParameterValue(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::Protocol(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::ProtocolApplication(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::Software(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::Protocol::SoftwareApplication(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType(3pm) | Container module for classes in the MAGE package: QuantitationType. |
| Bio::MAGE::QuantitationType::ConfidenceIndicator(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::DerivedSignal(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::Error(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::ExpectedValue(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::Failed(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::MeasuredSignal(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::PresentAbsent(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::PValue(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::QuantitationType(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::Ratio(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::SpecializedQuantitationType(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::QuantitationType::StandardQuantitationType(3pm) | Class for the MAGE-OM API. |
| Bio::MAGE::SQLUtils(3pm) | A module for exporting MAGE-OM objects to a database. |
| Bio::MAGE::Tools::MGEDOntologyClassEntry(3pm) | … |
| Bio::MAGE::Tools::MGEDOntologyEntry(3pm) | … |
| Bio::MAGE::Tools::MGEDOntologyHelper(3pm) | … |
| Bio::MAGE::Tools::MGEDOntologyPropertyEntry(3pm) | … |
| Bio::MAGE::XML::Handler(3pm) | … |
| Bio::MAGE::XML::Handler::ObjectHandler::SQL(3pm) | DESCRIPTION of Object. |
| Bio::MAGE::XML::Handler::ObjectHandlerI(3pm) | Abstract class for processing Bio::MAGE objects. |
| Bio::MAGE::XML::Reader(3pm) | A module for exporting MAGE-ML. |
| Bio::MAGE::XML::Writer(3pm) | A module for exporting MAGE-ML. |
| Bio::Map::Clone(3pm) | An central map object representing a clone. |
| Bio::Map::Contig(3pm) | A MapI implementation handling the contigs of a Physical Map (such as FPC). |
| Bio::Map::CytoMap(3pm) | A Bio::MapI compliant map implementation handling cytogenic bands. |
| Bio::Map::CytoMarker(3pm) | An object representing a marker. |
| Bio::Map::CytoPosition(3pm) | Marker class with cytogenetic band storing attributes. |
| Bio::Map::EntityI(3pm) | An Entity Interface. |
| Bio::Map::FPCMarker(3pm) | An central map object representing a marker. |
| Bio::Map::Gene(3pm) | An gene modelled as a mappable element. |
| Bio::Map::GeneMap(3pm) | A MapI implementation to represent the area around a gene. |
| Bio::Map::GenePosition(3pm) | A typed position, suitable for modelling the various. |
| Bio::Map::GeneRelative(3pm) | Represents being relative to named sub-regions of a. |
| Bio::Map::LinkageMap(3pm) | A representation of a genetic linkage map. |
| Bio::Map::LinkagePosition(3pm) | Create a Position for a Marker that will be placed on. |
| Bio::Map::MapI(3pm) | Interface for describing Map objects in bioperl. |
| Bio::Map::Mappable(3pm) | An object representing a generic map element that can have multiple locations in several. |
| Bio::Map::MappableI(3pm) | An object that can be placed in a map. |
| Bio::Map::Marker(3pm) | An central map object representing a generic marker that can have multiple location in. |
| Bio::Map::MarkerI(3pm) | Interface for basic marker functionality. |
| Bio::Map::Microsatellite(3pm) | An object representing a Microsatellite marker. |
| Bio::Map::OrderedPosition(3pm) | Abstracts the notion of a member of an ordered list of markers. Each marker. |
| Bio::Map::OrderedPositionWithDistance(3pm) | Abstracts the notion of a member of an ordered list of markers. |
| Bio::Map::Physical(3pm) | A class for handling a Physical Map (such as FPC). |
| Bio::Map::Position(3pm) | A single position of a Marker, or the range over which. |
| Bio::Map::PositionHandler(3pm) | A Position Handler Implementation. |
| Bio::Map::PositionHandlerI(3pm) | A Position Handler Interface. |
| Bio::Map::PositionI(3pm) | Abstracts the notion of a position having a value in the context of a marker and a Map. |
| Bio::Map::PositionWithSequence(3pm) | A position with a sequence. |
| Bio::Map::Prediction(3pm) | An object representing the predictions of something that can have multiple locations in. |
| Bio::Map::Relative(3pm) | Represents what a Position's coordiantes are relative to. |
| Bio::Map::RelativeI(3pm) | Interface for describing what a Position's coordiantes are. |
| Bio::Map::SimpleMap(3pm) | A MapI implementation handling the basics of a Map. |
| Bio::Map::TranscriptionFactor(3pm) | A transcription factor modelled as a mappable element. |
| Bio::MapIO(3pm) | A Map Factory object. |
| Bio::MapIO::fpc(3pm) | A FPC Map reader. |
| Bio::MapIO::mapmaker(3pm) | A Mapmaker Map reader. |
| Bio::Matrix::Generic(3pm) | A generic matrix implementation. |
| Bio::Matrix::IO(3pm) | A factory for Matrix parsing. |
| Bio::Matrix::IO::mlagan(3pm) | A parser for the mlagan substitution matrix. |
| Bio::Matrix::IO::phylip(3pm) | A parser for PHYLIP distance matricies. |
| Bio::Matrix::IO::scoring(3pm) | A parser for PAM/BLOSUM matricies. |
| Bio::Matrix::MatrixI(3pm) | An interface for describing a Matrix. |
| Bio::Matrix::Mlagan(3pm) | A generic matrix with mlagan fields. |
| Bio::Matrix::PhylipDist(3pm) | A Phylip Distance Matrix object. |
| Bio::Matrix::PSM::InstanceSite(3pm) | A PSM site occurrence. |
| Bio::Matrix::PSM::InstanceSiteI(3pm) | InstanceSite interface, holds an instance of a PSM. |
| Bio::Matrix::PSM::IO(3pm) | PSM parser. |
| Bio::Matrix::PSM::IO::mast(3pm) | PSM mast parser implementation. |
| Bio::Matrix::PSM::IO::masta(3pm) | Motif fasta format parser. |
| Bio::Matrix::PSM::IO::meme(3pm) | PSM meme parser implementation. |
| Bio::Matrix::PSM::IO::psiblast(3pm) | PSM psiblast parser. |
| Bio::Matrix::PSM::IO::transfac(3pm) | PSM transfac parser. |
| Bio::Matrix::PSM::ProtMatrix(3pm) | SiteMatrixI implementation, holds a position scoring matrix (or position weight. |
| Bio::Matrix::PSM::ProtPsm(3pm) | Handle combination of site matricies. |
| Bio::Matrix::PSM::Psm(3pm) | Handle combination of site matricies. |
| Bio::Matrix::PSM::PsmHeader(3pm) | PSM mast parser implementation. |
| Bio::Matrix::PSM::PsmHeaderI(3pm) | Handles the header data from a PSM file. |
| Bio::Matrix::PSM::PsmI(3pm) | Abstract interface to handler of site matricies. |
| Bio::Matrix::PSM::SiteMatrix(3pm) | SiteMatrixI implementation, holds a position scoring matrix (or position weight. |
| Bio::Matrix::PSM::SiteMatrixI(3pm) | SiteMatrixI implementation, holds a position scoring matrix (or position. |
| Bio::Matrix::Scoring(3pm) | Object which can hold scoring matrix information. |
| Bio::MolEvol::CodonModel(3pm) | Codon Evolution Models. |
| Bio::Nexml::Factory(3pm) | A factory module for creating BioPerl and Bio::Phylo objects from/to nexml documents. |
| Bio::NexmlIO(3pm) | Stream handler for NeXML documents. |
| Bio::Ontology::DocumentRegistry(3pm) | Keep track of where to find ontologies. Allows lookups by name. |
| Bio::Ontology::GOterm(3pm) | Representation of GO terms. |
| Bio::Ontology::InterProTerm(3pm) | Implementation of InterProI term interface. |
| Bio::Ontology::OBOEngine(3pm) | An Ontology Engine for OBO style flat file format from the Gene Ontology Consortium. |
| Bio::Ontology::OBOterm(3pm) | Representation of OBO terms. |
| Bio::Ontology::Ontology(3pm) | Standard implementation of an Ontology. |
| Bio::Ontology::OntologyEngineI(3pm) | Interface a minimal Ontology implementation should satisfy. |
| Bio::Ontology::OntologyI(3pm) | Interface for an ontology implementation. |
| Bio::Ontology::OntologyStore(3pm) | A repository of ontologies. |
| Bio::Ontology::Path(3pm) | A path for an ontology term graph. |
| Bio::Ontology::PathI(3pm) | Interface for a path between ontology terms. |
| Bio::Ontology::Relationship(3pm) | A relationship for an ontology. |
| Bio::Ontology::RelationshipFactory(3pm) | Instantiates a new Bio::Ontology::RelationshipI (or derived class). |
| Bio::Ontology::RelationshipI(3pm) | Interface for a relationship between ontology terms. |
| Bio::Ontology::RelationshipType(3pm) | A relationship type for an ontology. |
| Bio::Ontology::SimpleGOEngine::GraphAdaptor(3pm) | Graph adaptor for Bio::Ontology::SimpleGOEngine. |
| Bio::Ontology::SimpleOntologyEngine(3pm) | Implementation of OntologyEngineI interface. |
| Bio::Ontology::Term(3pm) | Implementation of the interface for ontology terms. |
| Bio::Ontology::TermFactory(3pm) | Instantiates a new Bio::Ontology::TermI (or derived class) through a factory. |
| Bio::Ontology::TermI(3pm) | Interface for ontology terms. |
| Bio::OntologyIO(3pm) | Parser factory for Ontology formats. |
| Bio::OntologyIO::dagflat(3pm) | A base class parser for GO flat-file type formats. |
| Bio::OntologyIO::goflat(3pm) | A parser for the Gene Ontology flat-file format. |
| Bio::OntologyIO::Handlers::BaseSAXHandler(3pm) | Base class for SAX Handlers. |
| Bio::OntologyIO::Handlers::InterPro_BioSQL_Handler(3pm) | Parse an InterPro XML file and persist the resulting. |
| Bio::OntologyIO::Handlers::InterProHandler(3pm) | XML handler class for InterProParser. |
| Bio::OntologyIO::InterProParser(3pm) | Parser for InterPro xml files. |
| Bio::OntologyIO::obo(3pm) | Parser for OBO flat-file format. |
| Bio::OntologyIO::simplehierarchy(3pm) | A base class parser for simple hierarchy-by-indentation. |
| Bio::OntologyIO::soflat(3pm) | A parser for the Sequence Ontology flat-file format. |
| Bio::ParameterBaseI(3pm) | Simple interface class for any parameter-related data such as IDs, database name,. |
| Bio::Perl(3pm) | Functional access to BioPerl for people who don't know objects. |
| Bio::Phenotype::Correlate(3pm) | Representation of a correlating phenotype in a given species. |
| Bio::Phenotype::Measure(3pm) | Representation of context/value(-range)/unit triplets. |
| Bio::Phenotype::MeSH::Term(3pm) | A MeSH term. |
| Bio::Phenotype::MeSH::Twig(3pm) | Context for a MeSH term. |
| Bio::Phenotype::OMIM::MiniMIMentry(3pm) | Representation of a Mini MIM entry. |
| Bio::Phenotype::OMIM::OMIMentry(3pm) | Represents OMIM (Online Mendelian Inheritance in Man) database entries. |
| Bio::Phenotype::OMIM::OMIMentryAllelicVariant(3pm) | Representation of a allelic variant of the OMIM database. |
| Bio::Phenotype::OMIM::OMIMparser(3pm) | Parser for the OMIM database. |
| Bio::Phenotype::Phenotype(3pm) | A class for modeling phenotypes. |
| Bio::Phenotype::PhenotypeI(3pm) | An interface for classes modeling phenotypes. |
| Bio::PhyloNetwork(3pm) | Module to compute with Phylogenetic Networks. |
| Bio::PhyloNetwork::Factory(3pm) | Module to sequentially generate Phylogenetic Networks. |
| Bio::PhyloNetwork::FactoryX(3pm) | Module to sequentially generate Phylogenetic Networks. |
| Bio::PhyloNetwork::GraphViz(3pm) | Interface between PhyloNetwork and GraphViz. |
| Bio::PhyloNetwork::muVector(3pm) | Module to compute with vectors of arbitrary dimension. |
| Bio::PhyloNetwork::RandomFactory(3pm) | Module to generate random Phylogenetic Networks. |
| Bio::PhyloNetwork::TreeFactory(3pm) | Module to sequentially generate Phylogenetic Trees. |
| Bio::PhyloNetwork::TreeFactoryMulti(3pm) | Module to sequentially generate Phylogenetic Trees. |
| Bio::PhyloNetwork::TreeFactoryX(3pm) | Module to sequentially generate Phylogenetic Trees. |
| Bio::PopGen::Genotype(3pm) | An implementation of GenotypeI which is just an allele container. |
| Bio::PopGen::GenotypeI(3pm) | A marker and alleles for a specific individual. |
| Bio::PopGen::HtSNP(3pm) | … |
| Bio::PopGen::Individual(3pm) | An implementation of an Individual who has Genotype or Sequence Results. |
| Bio::PopGen::IndividualI(3pm) | An individual who has Genotype or Sequence Results. |
| Bio::PopGen::IO(3pm) | Input individual,marker,allele information. |
| Bio::PopGen::IO::csv(3pm) | … |
| Bio::PopGen::IO::hapmap(3pm) | A parser for HapMap output data. |
| Bio::PopGen::IO::phase(3pm) | A parser for Phase format data. |
| Bio::PopGen::IO::prettybase(3pm) | Extract individual allele data from PrettyBase format. |
| Bio::PopGen::Marker(3pm) | A genetic marker which one uses to generate genotypes. |
| Bio::PopGen::MarkerI(3pm) | A Population Genetic conceptual marker. |
| Bio::PopGen::PopStats(3pm) | A collection of methods for calculating statistics about a population or sets of. |
| Bio::PopGen::Population(3pm) | A population of individuals. |
| Bio::PopGen::PopulationI(3pm) | Interface for Populations. |
| Bio::PopGen::Simulation::Coalescent(3pm) | A Coalescent simulation factory. |
| Bio::PopGen::Simulation::GeneticDrift(3pm) | A simple genetic drift simulation. |
| Bio::PopGen::Statistics(3pm) | Population Genetics statistical tests. |
| Bio::PopGen::TagHaplotype(3pm) | Haplotype tag object. |
| Bio::PopGen::Utilities(3pm) | Utilities for working with PopGen data and objects. |
| Bio::PrimarySeq(3pm) | Bioperl lightweight sequence object. |
| Bio::PrimarySeqI(3pm) | Interface definition for a Bio::PrimarySeq. |
| Bio::PrimerDesigner(3pm) | Design PCR Primers using primer3 and epcr. |
| Bio::PrimerDesigner::epcr(3pm) | A class for accessing the epcr binary. |
| Bio::PrimerDesigner::ispcr(3pm) | A class for accessing the isPcr (in-silico PCR) binary. |
| Bio::PrimerDesigner::primer3(3pm) | An class for accessing primer3. |
| Bio::PrimerDesigner::Remote(3pm) | A class for remote access to Bio::PrimerDesigner. |
| Bio::PrimerDesigner::Result(3pm) | A class for handling primer design or validation results. |
| Bio::PrimerDesigner::Tables(3pm) | … |
| Bio::PullParserI(3pm) | A base module for fast 'pull' parsing. |
| Bio::Range(3pm) | Pure perl RangeI implementation. |
| Bio::RangeI(3pm) | Range interface. |
| Bio::Restriction::Analysis(3pm) | Cutting sequences with restriction enzymes. |
| Bio::Restriction::Enzyme(3pm) | A single restriction endonuclease (cuts DNA at specific locations). |
| Bio::Restriction::Enzyme::MultiCut(3pm) | A single restriction endonuclease. |
| Bio::Restriction::Enzyme::MultiSite(3pm) | A single restriction endonuclease. |
| Bio::Restriction::EnzymeCollection(3pm) | Set of restriction endonucleases. |
| Bio::Restriction::EnzymeI(3pm) | Interface class for restriction endonuclease. |
| Bio::Restriction::IO(3pm) | Handler for sequence variation IO Formats. |
| Bio::Restriction::IO::bairoch(3pm) | Bairoch enzyme set. |
| Bio::Restriction::IO::base(3pm) | Base enzyme set. |
| Bio::Restriction::IO::itype2(3pm) | Itype2 enzyme set. |
| Bio::Restriction::IO::prototype(3pm) | Prototype enzyme set. |
| Bio::Restriction::IO::withrefm(3pm) | Withrefm enzyme set. |
| Bio::Roary(3pm) | Create a pan genome. |
| Bio::Roary::AccessoryBinaryFasta(3pm) | Output a FASTA file which represents the binary presence and absence of. |
| Bio::Roary::AccessoryClustering(3pm) | Take an a clusters file from CD-hit and the fasta file and output a fasta. |
| Bio::Roary::AnalyseGroups(3pm) | Take in a groups file and the original FASTA files and create plots and stats. |
| Bio::Roary::AnnotateGroups(3pm) | Take in a group file and associated GFF files for the isolates and update the. |
| Bio::Roary::AssemblyStatistics(3pm) | Given a spreadsheet of gene presence and absence calculate some statistics. |
| Bio::Roary::BedFromGFFRole(3pm) | A role to create a bed file from a gff. |
| Bio::Roary::ChunkFastaFile(3pm) | Take in a FASTA file and chunk it up into smaller pieces. |
| Bio::Roary::ClustersRole(3pm) | A role to read a clusters file from CD hit. |
| Bio::Roary::CombinedProteome(3pm) | Take in multiple FASTA sequences containing proteomes and concat them together. |
| Bio::Roary::CommandLine::AssemblyStatistics(3pm) | Given a spreadsheet of gene presence and absence calculate some. |
| Bio::Roary::CommandLine::Common(3pm) | Common command line settings. |
| Bio::Roary::CommandLine::CreatePanGenome(3pm) | Take in FASTA files of proteins and cluster them. |
| Bio::Roary::CommandLine::ExtractProteomeFromGff(3pm) | Take in GFF files and output the proteome. |
| Bio::Roary::CommandLine::GeneAlignmentFromNucleotides(3pm) | Take in a multifasta file of nucleotides, convert to. |
| Bio::Roary::CommandLine::IterativeCdhit(3pm) | Iteratively run cdhit. |
| Bio::Roary::CommandLine::ParallelAllAgainstAllBlastp(3pm) | Take in a FASTA file of proteins and blast against. |
| Bio::Roary::CommandLine::QueryRoary(3pm) | Take in a groups file and the protein fasta files and output selected. |
| Bio::Roary::CommandLine::Roary(3pm) | Take in FASTA files of proteins and cluster them. |
| Bio::Roary::CommandLine::RoaryCoreAlignment(3pm) | Take in the group statistics spreadsheet and the location of the. |
| Bio::Roary::CommandLine::RoaryPostAnalysis(3pm) | Perform the post analysis on the pan genome. |
| Bio::Roary::CommandLine::RoaryReorderSpreadsheet(3pm) | Take in a tree and a spreadsheet and output a reordered. |
| Bio::Roary::CommandLine::TransferAnnotationToGroups(3pm) | Take in a groups file and a set of GFF files and. |
| Bio::Roary::CommandLine::UniqueGenesPerSample(3pm) | Take in the clustered file and produce a sorted file with the. |
| Bio::Roary::ContigsToGeneIDsFromGFF(3pm) | Parse a GFF and efficiently and extract ordered gene ids on each contig. |
| Bio::Roary::Exceptions(3pm) | Exceptions for input data. |
| Bio::Roary::External::Blastp(3pm) | Wrapper around NCBIs blastp command. |
| Bio::Roary::External::Cdhit(3pm) | Wrapper to run cd-hit. |
| Bio::Roary::External::CheckTools(3pm) | Check external executables are available and are the correct version. |
| Bio::Roary::External::Fasttree(3pm) | Wrapper to run Fasttree. |
| Bio::Roary::External::GeneAlignmentFromNucleotides(3pm) | Take in multi-FASTA files of nucleotides and align each. |
| Bio::Roary::External::IterativeCdhit(3pm) | Iteratively run CDhit. |
| Bio::Roary::External::Mafft(3pm) | Wrapper to run mafft. |
| Bio::Roary::External::Makeblastdb(3pm) | Wrapper around NCBIs makeblastdb command. |
| Bio::Roary::External::Mcl(3pm) | Wrapper around MCL which takes in blast results and outputs clustered results. |
| Bio::Roary::External::PostAnalysis(3pm) | Perform the post analysis. |
| Bio::Roary::External::Prank(3pm) | Wrapper to run prank. |
| Bio::Roary::ExtractCoreGenesFromSpreadsheet(3pm) | Take in a spreadsheet produced by the pipeline and identify the. |
| Bio::Roary::ExtractProteomeFromGFF(3pm) | Take in a GFF file and create protein sequences in FASTA format. |
| Bio::Roary::ExtractProteomeFromGFFs(3pm) | Take in GFF files and create protein sequences in FASTA format. |
| Bio::Roary::FilterFullClusters(3pm) | Take an a clusters file from CD-hit and the fasta file and output a fasta. |
| Bio::Roary::FilterUnknownsFromFasta(3pm) | Take in fasta files, remove sequences with too many unknowns and return. |
| Bio::Roary::GeneNamesFromGFF(3pm) | Parse a GFF and efficiently extract ID -> Gene Name. |
| Bio::Roary::GroupLabels(3pm) | Add labels to the groups. |
| Bio::Roary::GroupStatistics(3pm) | Add labels to the groups. |
| Bio::Roary::InflateClusters(3pm) | Take the clusters file from cd-hit and use it to inflate the output of MCL. |
| Bio::Roary::IterativeCdhit(3pm) | Run CDhit iteratively with reducing thresholds, removing full clusters each time. |
| Bio::Roary::JobRunner::Local(3pm) | Execute a set of commands locally. |
| Bio::Roary::JobRunner::Parallel(3pm) | Use GNU Parallel. |
| Bio::Roary::JobRunner::Role(3pm) | A role to add job runner functionality. |
| Bio::Roary::LookupGeneFiles(3pm) | Take in an ordering of genes and a directory and return an ordered list of file. |
| Bio::Roary::MergeMultifastaAlignments(3pm) | Merge multifasta alignment files with equal numbers of sequences. |
| Bio::Roary::OrderGenes(3pm) | Take in GFF files and create a matrix of what genes are beside what other genes. |
| Bio::Roary::Output::BlastIdentityFrequency(3pm) | Take in blast results and find the percentage identity graph. |
| Bio::Roary::Output::CoreGeneAlignmentCoordinatesEMBL(3pm) | Create an embl file for the header with locations of. |
| Bio::Roary::Output::DifferenceBetweenSets(3pm) | Given two sets of isolates and a group file, output whats unique. |
| Bio::Roary::Output::EmblGroups(3pm) | Create a tab/embl file with the features for drawing pretty pictures. |
| Bio::Roary::Output::EMBLHeaderCommon(3pm) | A role containing some common methods for embl header files. |
| Bio::Roary::Output::GroupMultifasta(3pm) | Take in a group and create a multifasta file. |
| Bio::Roary::Output::GroupsMultifastaNucleotide(3pm) | Take in a GFF files and a groups file and output one. |
| Bio::Roary::Output::GroupsMultifastaProtein(3pm) | Take a multifasta nucleotide file and output it as proteins. |
| Bio::Roary::Output::GroupsMultifastas(3pm) | Take in a list of groups and create multifastas files for each group. |
| Bio::Roary::Output::GroupsMultifastasNucleotide(3pm) | Take in a set of GFF files and a groups file and output one. |
| Bio::Roary::Output::NumberOfGroups(3pm) | Create raw output files of group counts for turning into plots. |
| Bio::Roary::Output::QueryGroups(3pm) | Output the groups of the union of a set of input isolates. |
| Bio::Roary::ParallelAllAgainstAllBlast(3pm) | Run all against all blast in parallel. |
| Bio::Roary::ParseGFFAnnotationRole(3pm) | A role for parsing a gff file efficiently. |
| Bio::Roary::PostAnalysis(3pm) | Post analysis of pan genomes. |
| Bio::Roary::PrepareInputFiles(3pm) | Take in a mixture of FASTA and GFF input files and output FASTA proteomes only. |
| Bio::Roary::PresenceAbsenceMatrix(3pm) | Create a matrix with presence and absence. |
| Bio::Roary::QC::Report(3pm) | Generate a report based on kraken output. |
| Bio::Roary::ReformatInputGFFs(3pm) | Take in gff files and add suffix where a gene id is seen twice. |
| Bio::Roary::ReorderSpreadsheet(3pm) | Take in a tree file and a spreadsheet and output a spreadsheet with reordered. |
| Bio::Roary::SampleOrder(3pm) | Take in a tree file and return an ordering of the samples. |
| Bio::Roary::SequenceLengths(3pm) | Take in a fasta file and create a hash with the length of each sequence. |
| Bio::Roary::SortFasta(3pm) | Sort a fasta file by name. |
| Bio::Roary::SplitGroups(3pm) | Split groups. |
| Bio::Roary::SpreadsheetRole(3pm) | Read and write a spreadsheet. |
| Bio::Roary::UniqueGenesPerSample(3pm) | Take in the clustered file and produce a sorted file with the frequency of. |
| Bio::Root::Build(3pm) | … |
| Bio::Root::Exception(3pm) | … |
| Bio::Root::HTTPget(3pm) | Module for fallback HTTP get operations when LWP:: is unavailable. |
| Bio::Root::IO(3pm) | … |
| Bio::Root::Root(3pm) | … |
| Bio::Root::RootI(3pm) | … |
| Bio::Root::Storable(3pm) | … |
| Bio::Root::Test(3pm) | … |
| Bio::Root::TestObject(3pm) | An implementation of TestInterface. |
| Bio::Root::Utilities(3pm) | … |
| Bio::Root::Version(3pm) | … |
| Bio::SCF(3pm) | Perl extension for reading and writing SCF sequence files. |
| Bio::Search::BlastStatistics(3pm) | An object for Blast statistics. |
| Bio::Search::BlastUtils(3pm) | Utility functions for Bio::Search:: BLAST objects. |
| Bio::Search::DatabaseI(3pm) | Interface for a database used in a sequence search. |
| Bio::Search::GenericDatabase(3pm) | Generic implementation of Bio::Search::DatabaseI. |
| Bio::Search::GenericStatistics(3pm) | An object for statistics. |
| Bio::Search::Hit::BlastHit(3pm) | Blast-specific subclass of Bio::Search::Hit::GenericHit. |
| Bio::Search::Hit::BlastPullHit(3pm) | A parser and hit object for BLASTN hits. |
| Bio::Search::Hit::Fasta(3pm) | Hit object specific for Fasta-generated hits. |
| Bio::Search::Hit::GenericHit(3pm) | A generic implementation of the Bio::Search::Hit::HitI interface. |
| Bio::Search::Hit::HitFactory(3pm) | A factory to create Bio::Search::Hit::HitI objects. |
| Bio::Search::Hit::HitI(3pm) | Interface for a hit in a similarity search result. |
| Bio::Search::Hit::hmmer3Hit(3pm) | DESCRIPTION of Object. |
| Bio::Search::Hit::HMMERHit(3pm) | A Hit module for HMMER hits. |
| Bio::Search::Hit::HmmpfamHit(3pm) | A parser and hit object for hmmpfam hits. |
| Bio::Search::Hit::ModelHit(3pm) | A model-based implementation of the Bio::Search::Hit::HitI interface. |
| Bio::Search::Hit::PsiBlastHit(3pm) | Bioperl BLAST Hit object. |
| Bio::Search::Hit::PullHitI(3pm) | Bio::Search::Hit::HitI interface for pull parsers. |
| Bio::Search::HSP::BlastHSP(3pm) | Bioperl BLAST High-Scoring Pair object. |
| Bio::Search::HSP::BlastPullHSP(3pm) | A parser and HSP object for BlastN hsps. |
| Bio::Search::HSP::FastaHSP(3pm) | HSP object for FASTA specific data. |
| Bio::Search::HSP::GenericHSP(3pm) | A "Generic" implementation of a High Scoring Pair. |
| Bio::Search::HSP::HMMERHSP(3pm) | A HSP object for HMMER results. |
| Bio::Search::HSP::HmmpfamHSP(3pm) | A parser and HSP object for hmmpfam hsps. |
| Bio::Search::HSP::HSPFactory(3pm) | A factory to create Bio::Search::HSP::HSPI objects. |
| Bio::Search::HSP::HSPI(3pm) | Interface for a High Scoring Pair in a similarity search result. |
| Bio::Search::HSP::ModelHSP(3pm) | A HSP object for model-based searches. |
| Bio::Search::HSP::PsiBlastHSP(3pm) | Bioperl BLAST High-Scoring Pair object. |
| Bio::Search::HSP::PSLHSP(3pm) | A HSP for PSL output. |
| Bio::Search::HSP::PullHSPI(3pm) | Bio::Search::HSP::HSPI interface for pull parsers. |
| Bio::Search::HSP::WABAHSP(3pm) | HSP object suitable for describing WABA alignments. |
| Bio::Search::Iteration::GenericIteration(3pm) | A generic implementation of the Bio::Search::Iteration::IterationI. |
| Bio::Search::Iteration::IterationI(3pm) | Abstract interface to an iteration from an iterated search result, such. |
| Bio::Search::Processor(3pm) | DESCRIPTION of Object. |
| Bio::Search::Result::BlastPullResult(3pm) | A parser and result object for BLASTN. |
| Bio::Search::Result::BlastResult(3pm) | Blast-specific subclass of Bio::Search::Result::GenericResult. |
| Bio::Search::Result::CrossMatchResult(3pm) | CrossMatch-specific subclass of Bio::Search::Result::GenericResult. |
| Bio::Search::Result::GenericResult(3pm) | Generic Implementation of Bio::Search::Result::ResultI interface. |
| Bio::Search::Result::hmmer3Result(3pm) | DESCRIPTION of Object. |
| Bio::Search::Result::HMMERResult(3pm) | A Result object for HMMER results. |
| Bio::Search::Result::HmmpfamResult(3pm) | A parser and result object for hmmpfam. |
| Bio::Search::Result::INFERNALResult(3pm) | A Result object for INFERNAL results. |
| Bio::Search::Result::PullResultI(3pm) | Bio::Search::Result::ResultI interface for. |
| Bio::Search::Result::ResultFactory(3pm) | A factory to create Bio::Search::Result::ResultI objects. |
| Bio::Search::Result::ResultI(3pm) | Abstract interface to Search Result objects. |
| Bio::Search::Result::WABAResult(3pm) | Result object for WABA alignment output. |
| Bio::Search::SearchUtils(3pm) | Utility functions for Bio::Search:: objects. |
| Bio::Search::StatisticsI(3pm) | A Base object for statistics. |
| Bio::Search::Tiling::MapTileUtils(3pm) | Utilities for manipulating closed intervals for an HSP tiling algorithm. |
| Bio::Search::Tiling::MapTiling(3pm) | An implementation of an HSP tiling algorithm, with methods to obtain. |
| Bio::Search::Tiling::TilingI(3pm) | Abstract interface for an HSP tiling module. |
| Bio::SearchDist(3pm) | A perl wrapper around Sean Eddy's histogram object. |
| Bio::SearchIO(3pm) | Driver for parsing Sequence Database Searches (BLAST, FASTA, ...). |
| Bio::SearchIO::axt(3pm) | A parser for axt format reports. |
| Bio::SearchIO::blast(3pm) | Event generator for event based parsing of blast reports. |
| Bio::SearchIO::blast_pull(3pm) | A parser for BLAST output. |
| Bio::SearchIO::blasttable(3pm) | Driver module for SearchIO for parsing NCBI -m 8/9 format. |
| Bio::SearchIO::cross_match(3pm) | CrossMatch-specific subclass of Bio::SearchIO. |
| Bio::SearchIO::erpin(3pm) | SearchIO-based ERPIN parser. |
| Bio::SearchIO::EventHandlerI(3pm) | An abstract Event Handler for Search Result parsing. |
| Bio::SearchIO::exonerate(3pm) | Parser for Exonerate. |
| Bio::SearchIO::fasta(3pm) | A SearchIO parser for FASTA results. |
| Bio::SearchIO::FastHitEventBuilder(3pm) | Event Handler for SearchIO events. |
| Bio::SearchIO::gmap_f9(3pm) | Event generator for parsing gmap reports (Z format). |
| Bio::SearchIO::hmmer(3pm) | A parser for HMMER2 and HMMER3 output (hmmscan, hmmsearch, hmmpfam). |
| Bio::SearchIO::hmmer2(3pm) | A parser for HMMER output (hmmpfam, hmmsearch). |
| Bio::SearchIO::hmmer3(3pm) | … |
| Bio::SearchIO::hmmer_pull(3pm) | A parser for HMMER output. |
| Bio::SearchIO::infernal(3pm) | SearchIO-based Infernal parser. |
| Bio::SearchIO::IteratedSearchResultEventBuilder(3pm) | Event Handler for SearchIO events. |
| Bio::SearchIO::megablast(3pm) | A driver module for Bio::SearchIO to parse megablast reports (format 0). |
| Bio::SearchIO::psl(3pm) | A parser for PSL output (UCSC). |
| Bio::SearchIO::rnamotif(3pm) | SearchIO-based RNAMotif parser. |
| Bio::SearchIO::SearchResultEventBuilder(3pm) | Event Handler for SearchIO events. |
| Bio::SearchIO::SearchWriterI(3pm) | Interface for outputting parsed Search results. |
| Bio::SearchIO::sim4(3pm) | Parser for Sim4 alignments. |
| Bio::SearchIO::waba(3pm) | SearchIO parser for Jim Kent WABA program alignment output. |
| Bio::SearchIO::wise(3pm) | Parsing of wise output as alignments. |
| Bio::SearchIO::Writer::GbrowseGFF(3pm) | Interface for outputting parsed search results in Gbrowse GFF format. |
| Bio::SearchIO::Writer::HitTableWriter(3pm) | Tab-delimited data for Bio::Search::Hit::HitI objects. |
| Bio::SearchIO::Writer::HSPTableWriter(3pm) | Tab-delimited data for Bio::Search::HSP::HSPI objects. |
| Bio::SearchIO::Writer::HTMLResultWriter(3pm) | Write a Bio::Search::ResultI in HTML. |
| Bio::SearchIO::Writer::ResultTableWriter(3pm) | Outputs tab-delimited data for each Bio::Search::Result::ResultI. |
| Bio::SearchIO::Writer::TextResultWriter(3pm) | Object to implement writing a Bio::Search::ResultI in Text. |
| Bio::Seq(3pm) | Sequence object, with features. |
| Bio::Seq::BaseSeqProcessor(3pm) | Base implementation for a SequenceProcessor. |
| Bio::Seq::EncodedSeq(3pm) | Subtype of Bio::LocatableSeq to store DNA that encodes a protein. |
| Bio::Seq::LargeLocatableSeq(3pm) | LocatableSeq object that stores sequence as files in the tempdir. |
| Bio::Seq::LargePrimarySeq(3pm) | PrimarySeq object that stores sequence as files in the tempdir (as found by. |
| Bio::Seq::LargeSeq(3pm) | SeqI compliant object that stores sequence as files in /tmp. |
| Bio::Seq::LargeSeqI(3pm) | Interface class for sequences that cache their residues in a temporary file. |
| Bio::Seq::Meta(3pm) | Generic superclass for sequence objects with residue-based meta information. |
| Bio::Seq::Meta::Array(3pm) | Array-based generic implementation of a sequence class with residue-based meta. |
| Bio::Seq::MetaI(3pm) | Interface for sequence objects with residue-based meta information. |
| Bio::Seq::PrimaryQual(3pm) | Bioperl lightweight Quality Object. |
| Bio::Seq::PrimedSeq(3pm) | A sequence and a pair of primers matching on it. |
| Bio::Seq::QualI(3pm) | Interface definition for a Bio::Seq::Qual. |
| Bio::Seq::Quality(3pm) | Implementation of sequence with residue quality. |
| Bio::Seq::RichSeq(3pm) | Module implementing a sequence created from a rich sequence database entry. |
| Bio::Seq::RichSeqI(3pm) | Interface for sequences from rich data sources, mostly databases. |
| Bio::Seq::SeqBuilder(3pm) | Configurable object builder for sequence stream parsers. |
| Bio::Seq::SeqFactory(3pm) | Instantiation of generic Bio::PrimarySeqI (or derived) objects through a factory. |
| Bio::Seq::SeqFastaSpeedFactory(3pm) | Rapid creation of Bio::Seq objects through a factory. |
| Bio::Seq::SequenceTrace(3pm) | Bioperl object packaging a sequence with its trace. |
| Bio::Seq::SeqWithQuality(3pm) | Bioperl object packaging a sequence with its quality. Deprecated class, use. |
| Bio::Seq::SimulatedRead(3pm) | Read with sequencing errors taken from a reference sequence. |
| Bio::Seq::TraceI(3pm) | Interface definition for a Bio::Seq::Trace. |
| Bio::SeqAnalysisParserI(3pm) | Sequence analysis output parser interface. |
| Bio::SeqEvolution::DNAPoint(3pm) | Evolve a sequence by point mutations. |
| Bio::SeqEvolution::EvolutionI(3pm) | The interface for evolving sequences. |
| Bio::SeqEvolution::Factory(3pm) | Factory object to instantiate sequence evolving classes. |
| Bio::SeqFeature::Amplicon(3pm) | Amplicon feature. |
| Bio::SeqFeature::AnnotationAdaptor(3pm) | Integrates SeqFeatureIs annotation. |
| Bio::SeqFeature::Collection(3pm) | A container class for SeqFeatures suitable for performing operations such as. |
| Bio::SeqFeature::CollectionI(3pm) | An interface for a collection of SeqFeatureI objects. |
| Bio::SeqFeature::Computation(3pm) | Computation SeqFeature. |
| Bio::SeqFeature::FeaturePair(3pm) | Hold pair feature information e.g. blast hits. |
| Bio::SeqFeature::Gene::Exon(3pm) | A feature representing an exon. |
| Bio::SeqFeature::Gene::ExonI(3pm) | Interface for a feature representing an exon. |
| Bio::SeqFeature::Gene::GeneStructure(3pm) | A feature representing an arbitrarily complex structure of a gene. |
| Bio::SeqFeature::Gene::GeneStructureI(3pm) | A feature representing an arbitrarily. |
| Bio::SeqFeature::Gene::Intron(3pm) | An intron feature. |
| Bio::SeqFeature::Gene::NC_Feature(3pm) | Superclass for non-coding features. |
| Bio::SeqFeature::Gene::Poly_A_site(3pm) | Poly A feature. |
| Bio::SeqFeature::Gene::Promoter(3pm) | Describes a promoter. |
| Bio::SeqFeature::Gene::Transcript(3pm) | A feature representing a transcript. |
| Bio::SeqFeature::Gene::TranscriptI(3pm) | Interface for a feature representing a. |
| Bio::SeqFeature::Gene::UTR(3pm) | A feature representing an untranslated region. |
| Bio::SeqFeature::Generic(3pm) | Generic SeqFeature. |
| Bio::SeqFeature::Lite(3pm) | Lightweight Bio::SeqFeatureI class. |
| Bio::SeqFeature::PositionProxy(3pm) | Handle features when truncation/revcom sequences span a feature. |
| Bio::SeqFeature::Primer(3pm) | Primer Generic SeqFeature. |
| Bio::SeqFeature::Similarity(3pm) | A sequence feature based on similarity. |
| Bio::SeqFeature::SimilarityPair(3pm) | Sequence feature based on the similarity. |
| Bio::SeqFeature::SiRNA::Oligo(3pm) | Perl object for small inhibitory RNAs. |
| Bio::SeqFeature::SiRNA::Pair(3pm) | Perl object for small inhibitory RNA (SiRNA) oligo pairs. |
| Bio::SeqFeature::SubSeq(3pm) | Feature representing a subsequence. |
| Bio::SeqFeature::Tools::FeatureNamer(3pm) | Generates unique persistent names for features. |
| Bio::SeqFeature::Tools::IDHandler(3pm) | Maps $seq_feature->primary_tag. |
| Bio::SeqFeature::Tools::TypeMapper(3pm) | Maps $seq_feature->primary_tag. |
| Bio::SeqFeature::Tools::Unflattener(3pm) | Turns flat list of genbank-sourced features into a nested SeqFeatureI. |
| Bio::SeqFeature::TypedSeqFeatureI(3pm) | A strongly typed SeqFeature. |
| Bio::SeqFeatureI(3pm) | Abstract interface of a Sequence Feature. |
| Bio::SeqI(3pm) | [Developers] Abstract Interface of Sequence (with features). |
| Bio::SeqIO(3pm) | Handler for SeqIO Formats. |
| Bio::SeqIO::abi(3pm) | Abi trace sequence input/output stream. |
| Bio::SeqIO::ace(3pm) | Ace sequence input/output stream. |
| Bio::SeqIO::agave(3pm) | AGAVE sequence output stream. |
| Bio::SeqIO::alf(3pm) | Alf trace sequence input/output stream. |
| Bio::SeqIO::asciitree(3pm) | Asciitree sequence input/output stream. |
| Bio::SeqIO::bsml(3pm) | BSML sequence input/output stream. |
| Bio::SeqIO::bsml_sax(3pm) | BSML sequence input/output stream using SAX. |
| Bio::SeqIO::chadoxml(3pm) | Chadoxml sequence output stream. |
| Bio::SeqIO::chaos(3pm) | Chaos sequence input/output stream. |
| Bio::SeqIO::chaosxml(3pm) | Chaosxml sequence input/output stream. |
| Bio::SeqIO::ctf(3pm) | Ctf trace sequence input/output stream. |
| Bio::SeqIO::embl(3pm) | EMBL sequence input/output stream. |
| Bio::SeqIO::embldriver(3pm) | EMBL sequence input/output stream. |
| Bio::SeqIO::entrezgene(3pm) | Entrez Gene ASN1 parser. |
| Bio::SeqIO::excel(3pm) | Sequence input/output stream from a. |
| Bio::SeqIO::exp(3pm) | Exp trace sequence input/output stream. |
| Bio::SeqIO::fasta(3pm) | Fasta sequence input/output stream. |
| Bio::SeqIO::fastq(3pm) | Fastq sequence input/output stream. |
| Bio::SeqIO::flybase_chadoxml(3pm) | FlyBase variant of chadoxml with sequence output stream. |
| Bio::SeqIO::FTHelper(3pm) | Helper class for EMBL/Genbank feature tables. |
| Bio::SeqIO::game(3pm) | … |
| Bio::SeqIO::game::featHandler(3pm) | … |
| Bio::SeqIO::game::gameHandler(3pm) | … |
| Bio::SeqIO::game::gameSubs(3pm) | … |
| Bio::SeqIO::game::gameWriter(3pm) | … |
| Bio::SeqIO::game::seqHandler(3pm) | … |
| Bio::SeqIO::gbdriver(3pm) | GenBank handler-based push parser. |
| Bio::SeqIO::gbxml(3pm) | GenBank sequence input/output stream using SAX. |
| Bio::SeqIO::gcg(3pm) | GCG sequence input/output stream. |
| Bio::SeqIO::genbank(3pm) | GenBank sequence input/output stream. |
| Bio::SeqIO::Handler::GenericRichSeqHandler(3pm) | Bio::HandlerI-based data handler for GenBank/EMBL/UniProt (and. |
| Bio::SeqIO::interpro(3pm) | InterProScan XML input/output stream. |
| Bio::SeqIO::kegg(3pm) | KEGG sequence input/output stream. |
| Bio::SeqIO::largefasta(3pm) | Method i/o on very large fasta sequence files. |
| Bio::SeqIO::lasergene(3pm) | Lasergene sequence file input/output stream. |
| Bio::SeqIO::locuslink(3pm) | LocusLink input/output stream. |
| Bio::SeqIO::mbsout(3pm) | Input stream for output by Teshima et al.'s mbs. |
| Bio::SeqIO::metafasta(3pm) | Metafasta sequence input/output stream. |
| Bio::SeqIO::msout(3pm) | Input stream for output by Hudson's ms. |
| Bio::SeqIO::MultiFile(3pm) | Treating a set of files as a single input stream. |
| Bio::SeqIO::nexml(3pm) | NeXML sequence input/output stream. |
| Bio::SeqIO::phd(3pm) | Phd file input/output stream. |
| Bio::SeqIO::pir(3pm) | PIR sequence input/output stream. |
| Bio::SeqIO::pln(3pm) | Pln trace sequence input/output stream. |
| Bio::SeqIO::qual(3pm) | .qual file input/output stream. |
| Bio::SeqIO::raw(3pm) | Raw sequence file input/output stream. |
| Bio::SeqIO::scf(3pm) | .scf file input/output stream. |
| Bio::SeqIO::seqxml(3pm) | SeqXML sequence input/output stream. |
| Bio::SeqIO::strider(3pm) | DNA strider sequence input/output stream. |
| Bio::SeqIO::swiss(3pm) | Swissprot sequence input/output stream. |
| Bio::SeqIO::swissdriver(3pm) | SwissProt/UniProt handler-based push parser. |
| Bio::SeqIO::tab(3pm) | Nearly raw sequence file input/output stream. Reads/writes id"\t"sequence"\n". |
| Bio::SeqIO::table(3pm) | Sequence input/output stream from a delimited table. |
| Bio::SeqIO::tigr(3pm) | TIGR XML sequence input/output stream. |
| Bio::SeqIO::tigrxml(3pm) | Parse TIGR (new) XML. |
| Bio::SeqIO::tinyseq(3pm) | Reading/writing sequences in NCBI TinySeq format. |
| Bio::SeqIO::tinyseq::tinyseqHandler(3pm) | XML event handlers to support NCBI TinySeq XML parsing. |
| Bio::SeqIO::ztr(3pm) | Ztr trace sequence input/output stream. |
| Bio::SeqUtils(3pm) | Additional methods for PrimarySeq objects. |
| Bio::SimpleAlign(3pm) | Multiple alignments held as a set of sequences. |
| Bio::SimpleAnalysisI(3pm) | A simple interface to any (local or remote) analysis tool. |
| Bio::Species(3pm) | Generic species object. |
| Bio::Structure::Atom(3pm) | Bioperl structure Object, describes an Atom. |
| Bio::Structure::Chain(3pm) | Bioperl structure Object, describes a chain. |
| Bio::Structure::Entry(3pm) | Bioperl structure Object, describes the whole entry. |
| Bio::Structure::IO(3pm) | Handler for Structure Formats. |
| Bio::Structure::IO::pdb(3pm) | PDB input/output stream. |
| Bio::Structure::Model(3pm) | Bioperl structure Object, describes a Model. |
| Bio::Structure::Residue(3pm) | Bioperl structure Object, describes a Residue. |
| Bio::Structure::SecStr::DSSP::Res(3pm) | Module for parsing/accessing dssp output. |
| Bio::Structure::SecStr::STRIDE::Res(3pm) | Module for parsing/accessing stride output. |
| Bio::Structure::StructureI(3pm) | Abstract Interface for a Structure objects. |
| Bio::Symbol::Alphabet(3pm) | BSANE/BioCORBA compliant symbol list alphabet. |
| Bio::Symbol::AlphabetI(3pm) | A Symbol Alphabet. |
| Bio::Symbol::DNAAlphabet(3pm) | A ready made DNA alphabet. |
| Bio::Symbol::ProteinAlphabet(3pm) | A ready made Protein alphabet. |
| Bio::Symbol::Symbol(3pm) | A biological symbol. |
| Bio::Symbol::SymbolI(3pm) | Interface for a Symbol. |
| Bio::Taxon(3pm) | A node in a represented taxonomy. |
| Bio::Taxonomy(3pm) | Representing Taxonomy. |
| Bio::Taxonomy::FactoryI(3pm) | Interface to define how to access NCBI Taxonoy. |
| Bio::Taxonomy::Node(3pm) | A node in a represented taxonomy. |
| Bio::Taxonomy::Taxon(3pm) | Generic Taxonomic Entity object. |
| Bio::Taxonomy::Tree(3pm) | An Organism Level Implementation of TreeI interface. |
| Bio::Tools::AlignFactory(3pm) | Base object for alignment factories. |
| Bio::Tools::Alignment::Consed(3pm) | A module to work with objects from consed .ace files. |
| Bio::Tools::Alignment::Trim(3pm) | A kludge to do specialized trimming of sequence based on quality. |
| Bio::Tools::AmpliconSearch(3pm) | Find amplicons in a template using degenerate PCR primers. |
| Bio::Tools::Analysis::DNA::ESEfinder(3pm) | A wrapper around ESEfinder server. |
| Bio::Tools::Analysis::Protein::Domcut(3pm) | A wrapper around Domcut server. |
| Bio::Tools::Analysis::Protein::ELM(3pm) | A wrapper around the ELM server which predicts short functional motifs on. |
| Bio::Tools::Analysis::Protein::GOR4(3pm) | A wrapper around GOR4 protein secondary structure prediction server. |
| Bio::Tools::Analysis::Protein::HNN(3pm) | A wrapper around the HNN protein secondary structure prediction server. |
| Bio::Tools::Analysis::Protein::NetPhos(3pm) | A wrapper around NetPhos server. |
| Bio::Tools::Analysis::Protein::Scansite(3pm) | A wrapper around the Scansite server. |
| Bio::Tools::Analysis::Protein::Sopma(3pm) | A wrapper around the Sopma protein secondary structure prediction. |
| Bio::Tools::Analysis::SimpleAnalysisBase(3pm) | Abstract superclass for SimpleAnalysis implementations. |
| Bio::Tools::AnalysisResult(3pm) | Base class for analysis result objects and parsers. |
| Bio::Tools::Blat(3pm) | Parser for Blat program. |
| Bio::Tools::CodonTable(3pm) | Codon table object. |
| Bio::Tools::Coil(3pm) | Parser for Coil output. |
| Bio::Tools::dpAlign(3pm) | Perl extension to do pairwise dynamic programming sequence alignment. |
| Bio::Tools::ECnumber(3pm) | Representation of EC numbers (Enzyme Classification). |
| Bio::Tools::EMBOSS::Palindrome(3pm) | Parse EMBOSS palindrome output. |
| Bio::Tools::EPCR(3pm) | Parse ePCR output and make features. |
| Bio::Tools::Eponine(3pm) | Results of one Eponine run. |
| Bio::Tools::Est2Genome(3pm) | Parse est2genome output, makes simple Bio::SeqFeature::Generic objects. |
| Bio::Tools::ESTScan(3pm) | Results of one ESTScan run. |
| Bio::Tools::EUtilities(3pm) | NCBI eutil XML parsers. |
| Bio::Tools::EUtilities::EUtilDataI(3pm) | EUtil data object interface. |
| Bio::Tools::EUtilities::EUtilParameters(3pm) | Manipulation of NCBI eutil-based parameters for remote database. |
| Bio::Tools::EUtilities::History(3pm) | Lightweight implementation of HistoryI interface (not bound to filehandles,. |
| Bio::Tools::EUtilities::HistoryI(3pm) | Simple extension of EUtilDataI interface class for classes which hold NCBI. |
| Bio::Tools::EUtilities::Info(3pm) | Interface class for storing einfo data. |
| Bio::Tools::EUtilities::Info::FieldInfo(3pm) | Class for storing einfo field data. |
| Bio::Tools::EUtilities::Info::LinkInfo(3pm) | Class for storing einfo link data. |
| Bio::Tools::EUtilities::Link(3pm) | General API for accessing data retrieved from elink queries. |
| Bio::Tools::EUtilities::Link::LinkSet(3pm) | Class for EUtils LinkSets. |
| Bio::Tools::EUtilities::Link::UrlLink(3pm) | Class for EUtils UrlLinks. |
| Bio::Tools::EUtilities::Query(3pm) | Parse and collect esearch, epost, espell, egquery information. |
| Bio::Tools::EUtilities::Query::GlobalQuery(3pm) | Container class for egquery data. |
| Bio::Tools::EUtilities::Summary(3pm) | Class for handling data output (XML) from esummary. |
| Bio::Tools::EUtilities::Summary::DocSum(3pm) | Data object for document summary data from esummary. |
| Bio::Tools::EUtilities::Summary::Item(3pm) | Simple layered object for DocSum item data. |
| Bio::Tools::EUtilities::Summary::ItemContainerI(3pm) | Abtract interface methods for accessing Item information. |
| Bio::Tools::Fgenesh(3pm) | Parse results of one Fgenesh run. |
| Bio::Tools::FootPrinter(3pm) | Write sequence features in FootPrinter format. |
| Bio::Tools::Gel(3pm) | Calculates relative electrophoretic migration distances. |
| Bio::Tools::Geneid(3pm) | Results of one geneid run. |
| Bio::Tools::Genemark(3pm) | Results of one Genemark run. |
| Bio::Tools::Genewise(3pm) | Results of one Genewise run. |
| Bio::Tools::Genomewise(3pm) | Results of one Genomewise run. |
| Bio::Tools::Genscan(3pm) | Results of one Genscan run. |
| Bio::Tools::GFF(3pm) | A Bio::SeqAnalysisParserI compliant GFF format parser. |
| Bio::Tools::Glimmer(3pm) | Parser for Glimmer 2.X/3.X prokaryotic and GlimmerM/GlimmerHMM eukaryotic gene. |
| Bio::Tools::Grail(3pm) | Results of one Grail run. |
| Bio::Tools::GuessSeqFormat(3pm) | Module for determining the sequence format of the contents of a file, a string,. |
| Bio::Tools::HMMER::Domain(3pm) | One particular domain hit from HMMER. |
| Bio::Tools::HMMER::Results(3pm) | Object representing HMMER output results. |
| Bio::Tools::HMMER::Set(3pm) | Set of identical domains from HMMER matches. |
| Bio::Tools::Hmmpfam(3pm) | Parser for Hmmpfam program. |
| Bio::Tools::ipcress(3pm) | Parse ipcress output and make features. |
| Bio::Tools::isPcr(3pm) | Parse isPcr output and make features. |
| Bio::Tools::IUPAC(3pm) | Generates unique sequence objects or regular expressions from an ambiguous IUPAC sequence. |
| Bio::Tools::Lucy(3pm) | Object for analyzing the output from Lucy,. |
| Bio::Tools::Match(3pm) | Parses output from Transfac's match(TM). |
| Bio::Tools::MZEF(3pm) | Results of one MZEF run. |
| Bio::Tools::OddCodes(3pm) | Object holding alternative alphabet coding for one protein sequence. |
| Bio::Tools::Phylo::Gerp(3pm) | Parses output from GERP. |
| Bio::Tools::Phylo::Gumby(3pm) | Parses output from gumby. |
| Bio::Tools::Phylo::Molphy(3pm) | Parser for Molphy output. |
| Bio::Tools::Phylo::Molphy::Result(3pm) | Container for data parsed from a ProtML run. |
| Bio::Tools::Phylo::Phylip::ProtDist(3pm) | Parser for ProtDist output. |
| Bio::Tools::pICalculator(3pm) | Calculate the isoelectric point of a protein. |
| Bio::Tools::Prediction::Exon(3pm) | A predicted exon feature. |
| Bio::Tools::Prediction::Gene(3pm) | A predicted gene structure feature. |
| Bio::Tools::Primer3(3pm) | Create input for and work with the output from the program primer3. |
| Bio::Tools::Primer::Assessor::Base(3pm) | Base class for common assessor things. |
| Bio::Tools::Primer::AssessorI(3pm) | Interface for assessing primer pairs. |
| Bio::Tools::Primer::Feature(3pm) | Position of a single primer. |
| Bio::Tools::Primer::Pair(3pm) | Two primers on left and right side. |
| Bio::Tools::Prints(3pm) | Parser for FingerPRINTScanII program. |
| Bio::Tools::Profile(3pm) | Parse Profile output. |
| Bio::Tools::Promoterwise(3pm) | Parser for Promoterwise tab format output. |
| Bio::Tools::PrositeScan(3pm) | Parser for ps_scan result. |
| Bio::Tools::Protparam(3pm) | Submit to and parse output from protparam ;. |
| Bio::Tools::Pseudowise(3pm) | Results of one Pseudowise run. |
| Bio::Tools::pSW(3pm) | Pairwise Smith Waterman object. |
| Bio::Tools::QRNA(3pm) | A Parser for qrna output. |
| Bio::Tools::RandomDistFunctions(3pm) | A set of routines useful for generating random data in different. |
| Bio::Tools::RepeatMasker(3pm) | A parser for RepeatMasker output. |
| Bio::Tools::Run::Alignment::Amap(3pm) | Object for the calculation of an iterative multiple sequence alignment from. |
| Bio::Tools::Run::Alignment::Blat(3pm) | … |
| Bio::Tools::Run::Alignment::Clustalw(3pm) | Object for the calculation of a multiple sequence alignment from a set. |
| Bio::Tools::Run::Alignment::DBA(3pm) | Object for the alignment of two sequences using the DNA Block Aligner. |
| Bio::Tools::Run::Alignment::Exonerate(3pm) | … |
| Bio::Tools::Run::Alignment::Gmap(3pm) | Wrapper for running gmap. |
| Bio::Tools::Run::Alignment::Kalign(3pm) | Object for the calculation of an iterative multiple sequence alignment. |
| Bio::Tools::Run::Alignment::Lagan(3pm) | Object for the local execution of the LAGAN suite of tools (including. |
| Bio::Tools::Run::Alignment::MAFFT(3pm) | Run the MAFFT alignment tools. |
| Bio::Tools::Run::Alignment::MSAProbs(3pm) | Object for the calculation of a multiple sequence alignment (MSA) from. |
| Bio::Tools::Run::Alignment::Muscle(3pm) | Object for the calculation of an iterative multiple sequence alignment. |
| Bio::Tools::Run::Alignment::Pal2Nal(3pm) | Wrapper for Pal2Nal. |
| Bio::Tools::Run::Alignment::Probalign(3pm) | Object for the calculation of a multiple sequence alignment from a set. |
| Bio::Tools::Run::Alignment::Probcons(3pm) | Object for the calculation of an iterative multiple sequence alignment. |
| Bio::Tools::Run::Alignment::Proda(3pm) | Object for the calculation of sets of multiple sequence alignments from a. |
| Bio::Tools::Run::Alignment::Sim4(3pm) | Wrapper for Sim4 program that allows for alignment of cdna to genomic. |
| Bio::Tools::Run::Alignment::StandAloneFasta(3pm) | Object for the local execution of the Fasta3 programs. |
| Bio::Tools::Run::Alignment::TCoffee(3pm) | Object for the calculation of a multiple sequence alignment from a set. |
| Bio::Tools::Run::Analysis(3pm) | Module representing any (remote or local) analysis tool. |
| Bio::Tools::Run::Analysis::soap(3pm) | A SOAP-based access to the analysis tools. |
| Bio::Tools::Run::AnalysisFactory(3pm) | A directory of analysis tools. |
| Bio::Tools::Run::AnalysisFactory::soap(3pm) | A SOAP-based access to the list of analysis tools. |
| Bio::Tools::Run::AssemblerBase(3pm) | Base class for wrapping external assemblers. |
| Bio::Tools::Run::BEDTools(3pm) | Run wrapper for the BEDTools suite of programs *BETA*. |
| Bio::Tools::Run::BEDTools::Config(3pm) | Configuration data for bowtie commands. |
| Bio::Tools::Run::BlastPlus(3pm) | A wrapper for NCBI's blast+ suite. |
| Bio::Tools::Run::Bowtie(3pm) | Run wrapper for the Bowtie short-read assembler *BETA*. |
| Bio::Tools::Run::Bowtie::Config(3pm) | Configuration data for bowtie commands. |
| Bio::Tools::Run::BWA(3pm) | Run wrapper for the BWA short-read assembler *BETA*. |
| Bio::Tools::Run::BWA::Config(3pm) | Configuration data for BWA commands. |
| Bio::Tools::Run::Cap3(3pm) | Wrapper for CAP3. |
| Bio::Tools::Run::Coil(3pm) | Wrapper for ncoils program. |
| Bio::Tools::Run::EMBOSSacd(3pm) | Class for EMBOSS Application qualifiers. |
| Bio::Tools::Run::EMBOSSApplication(3pm) | Class for EMBOSS Applications. |
| Bio::Tools::Run::Ensembl(3pm) | A simplified front-end for setting up the registry. |
| Bio::Tools::Run::Eponine(3pm) | Object for execution of the Eponine which is a mammalian TSS predictor. |
| Bio::Tools::Run::ERPIN(3pm) | Wrapper for local execution of the ERPIN suite of programs. |
| Bio::Tools::Run::FootPrinter(3pm) | Wrapper for the FootPrinter program. |
| Bio::Tools::Run::Genemark(3pm) | Wrapper for local execution of the GeneMark family of programs. |
| Bio::Tools::Run::GenericParameters(3pm) | An object for the parameters used to run programs. |
| Bio::Tools::Run::Genewise(3pm) | Object for predicting genes in a given sequence given a protein. |
| Bio::Tools::Run::Genscan(3pm) | Object for identifying genes in a given sequence given a matrix(for appropriate. |
| Bio::Tools::Run::Glimmer(3pm) | Wrapper for local execution of Glimmer, GlimmerM and GlimmerHMM. |
| Bio::Tools::Run::Hmmer(3pm) | Wrapper for local execution of hmmalign, hmmbuild, hmmcalibrate, hmmemit, hmmpfam,. |
| Bio::Tools::Run::Infernal(3pm) | Wrapper for local execution of cmalign, cmbuild, cmsearch, cmscore. |
| Bio::Tools::Run::Maq(3pm) | Run wrapper for the Maq short-read assembler *BETA*. |
| Bio::Tools::Run::Maq::Config(3pm) | Configuration data for maq commands. |
| Bio::Tools::Run::Match(3pm) | Wrapper for Transfac's match(TM). |
| Bio::Tools::Run::MCS(3pm) | Wrapper for MCS. |
| Bio::Tools::Run::Mdust(3pm) | Perl extension for Mdust nucleotide filtering. |
| Bio::Tools::Run::Meme(3pm) | Wrapper for Meme Program. |
| Bio::Tools::Run::Minimo(3pm) | Wrapper for local execution of the Minimo assembler. |
| Bio::Tools::Run::Newbler(3pm) | Wrapper for local execution of Newbler. |
| Bio::Tools::Run::ParametersI(3pm) | A Base object for the parameters used to run programs. |
| Bio::Tools::Run::Phrap(3pm) | A wrapper for running Phrap. |
| Bio::Tools::Run::Phylo::FastTree(3pm) | … |
| Bio::Tools::Run::Phylo::Gerp(3pm) | Wrapper for GERP. |
| Bio::Tools::Run::Phylo::Gumby(3pm) | Wrapper for gumby. |
| Bio::Tools::Run::Phylo::Hyphy::Base(3pm) | Hyphy wrapping base methods. |
| Bio::Tools::Run::Phylo::Hyphy::BatchFile(3pm) | Wrapper for custom execution of Hyphy batch files. |
| Bio::Tools::Run::Phylo::Hyphy::FEL(3pm) | Wrapper around the Hyphy FEL analysis. |
| Bio::Tools::Run::Phylo::Hyphy::Modeltest(3pm) | Wrapper around the Hyphy Modeltest analysis. |
| Bio::Tools::Run::Phylo::Hyphy::REL(3pm) | Wrapper around the Hyphy REL analysis. |
| Bio::Tools::Run::Phylo::Hyphy::SLAC(3pm) | Wrapper around the Hyphy SLAC analysis. |
| Bio::Tools::Run::Phylo::LVB(3pm) | Object for using the LVB program to create an array of Bio::Tree objects from a. |
| Bio::Tools::Run::Phylo::Molphy::ProtML(3pm) | A wrapper for the Molphy pkg app ProtML. |
| Bio::Tools::Run::Phylo::Njtree::Best(3pm) | Wrapper around the Njtree (Njtree/phyml) best program. |
| Bio::Tools::Run::Phylo::PAML::Baseml(3pm) | Wrapper aroud the PAML program baseml. |
| Bio::Tools::Run::Phylo::PAML::Codeml(3pm) | Wrapper aroud the PAML program codeml. |
| Bio::Tools::Run::Phylo::PAML::Evolver(3pm) | Wrapper aroud the PAML program evolver. |
| Bio::Tools::Run::Phylo::PAML::Yn00(3pm) | Wrapper aroud the PAML program yn00. |
| Bio::Tools::Run::Phylo::Phast::PhastCons(3pm) | Wrapper for footprinting using. |
| Bio::Tools::Run::Phylo::Phast::PhyloFit(3pm) | Wrapper for phyloFit. |
| Bio::Tools::Run::Phylo::Phylip::Base(3pm) | Base object for Phylip modules. |
| Bio::Tools::Run::Phylo::Phylip::Consense(3pm) | Wrapper for the phylip program Consense. |
| Bio::Tools::Run::Phylo::Phylip::DrawGram(3pm) | Use Phylip DrawTree program to draw phylograms or phenograms. |
| Bio::Tools::Run::Phylo::Phylip::DrawTree(3pm) | Use Phylip DrawTree program to draw trees. |
| Bio::Tools::Run::Phylo::Phylip::Neighbor(3pm) | Wrapper for the phylip program neighbor by Joseph Felsenstein for. |
| Bio::Tools::Run::Phylo::Phylip::PhylipConf(3pm) | … |
| Bio::Tools::Run::Phylo::Phylip::ProtDist(3pm) | Wrapper for the phylip program protdist. |
| Bio::Tools::Run::Phylo::Phylip::ProtPars(3pm) | Object for creating a Bio::Tree object from a multiple alignment. |
| Bio::Tools::Run::Phylo::Phylip::SeqBoot(3pm) | Wrapper for the phylip program SeqBoot. |
| Bio::Tools::Run::Phylo::PhyloBase(3pm) | … |
| Bio::Tools::Run::Phylo::Phyml(3pm) | Wrapper for rapid reconstruction of phylogenies using Phyml. |
| Bio::Tools::Run::Phylo::QuickTree(3pm) | Wrapper for rapid reconstruction of. |
| Bio::Tools::Run::Phylo::Raxml(3pm) | … |
| Bio::Tools::Run::Phylo::Semphy(3pm) | Wrapper for Semphy. |
| Bio::Tools::Run::Phylo::SLR(3pm) | Wrapper around the SLR program. |
| Bio::Tools::Run::Primate(3pm) | … |
| Bio::Tools::Run::Primer3(3pm) | Create input for and work with the output from the program primer3. |
| Bio::Tools::Run::Prints(3pm) | … |
| Bio::Tools::Run::Profile(3pm) | … |
| Bio::Tools::Run::Promoterwise(3pm) | Wrapper for aligning two sequences using promoterwise. |
| Bio::Tools::Run::Pseudowise(3pm) | Object for prediting pseudogenes in a given sequence given a protein and a cdna. |
| Bio::Tools::Run::RemoteBlast(3pm) | Object for remote execution of the NCBI Blast via HTTP. |
| Bio::Tools::Run::RepeatMasker(3pm) | Wrapper for RepeatMasker Program. |
| Bio::Tools::Run::RNAMotif(3pm) | Wrapper for local execution of rnamotif, rm2ct, rmfmt, rmprune. |
| Bio::Tools::Run::Samtools(3pm) | A run wrapper for the samtools suite *BETA*. |
| Bio::Tools::Run::Samtools::Config(3pm) | Configurator for Bio::Tools::Run::Samtools. |
| Bio::Tools::Run::Seg(3pm) | Object for identifying low complexity. |
| Bio::Tools::Run::Signalp(3pm) | … |
| Bio::Tools::Run::Simprot(3pm) | Wrapper around the Simprot program. Wrapper for the calculation of a multiple. |
| Bio::Tools::Run::StandAloneBlast(3pm) | Object for the local execution of the NCBI BLAST program suite (blastall,. |
| Bio::Tools::Run::StandAloneBlastPlus(3pm) | Compute with NCBI's blast+ suite *ALPHA*. |
| Bio::Tools::Run::StandAloneBlastPlus::BlastMethods(3pm) | Provides BLAST methods to StandAloneBlastPlus. |
| Bio::Tools::Run::StandAloneNCBIBlast(3pm) | Object for the local execution of the NCBI BLAST program suite. |
| Bio::Tools::Run::StandAloneWUBlast(3pm) | Object for the local execution of WU-Blast. |
| Bio::Tools::Run::TigrAssembler(3pm) | Wrapper for local execution of TIGR Assembler. |
| Bio::Tools::Run::Tmhmm(3pm) | Object for identifying transmembrane helixes. |
| Bio::Tools::Run::TribeMCL(3pm) | … |
| Bio::Tools::Run::tRNAscanSE(3pm) | Wrapper for local execution of tRNAscan-SE. |
| Bio::Tools::Run::Vista(3pm) | … |
| Bio::Tools::Run::WrapperBase(3pm) | A Base object for wrappers around executables. |
| Bio::Tools::Run::WrapperBase::CommandExts(3pm) | Extensions to WrapperBase for handling programs with commands. |
| Bio::Tools::Seg(3pm) | Parse "seg" output. |
| Bio::Tools::SeqPattern(3pm) | Represent a sequence pattern or motif. |
| Bio::Tools::SeqPattern::Backtranslate(3pm) | … |
| Bio::Tools::SeqStats(3pm) | Object holding statistics for one particular sequence. |
| Bio::Tools::SeqWords(3pm) | Object holding n-mer statistics for a sequence. |
| Bio::Tools::Sigcleave(3pm) | Bioperl object for sigcleave analysis. |
| Bio::Tools::Signalp(3pm) | Parser for Signalp output. |
| Bio::Tools::Signalp::ExtendedSignalp(3pm) | Enhanced parser for Signalp output. |
| Bio::Tools::Sim4::Exon(3pm) | A single exon determined by an alignment. |
| Bio::Tools::Sim4::Results(3pm) | Results of one Sim4 run. |
| Bio::Tools::SiRNA(3pm) | Perl object for designing small inhibitory RNAs. |
| Bio::Tools::SiRNA::Ruleset::saigo(3pm) | Perl object implementing the Saigo group's rules for designing small. |
| Bio::Tools::SiRNA::Ruleset::tuschl(3pm) | Perl object implementing the tuschl group's rules for designing small. |
| Bio::Tools::Spidey::Exon(3pm) | A single exon determined by an alignment. |
| Bio::Tools::Spidey::Results(3pm) | Results of a Spidey run. |
| Bio::Tools::TandemRepeatsFinder(3pm) | A parser for Tandem Repeats Finder output. |
| Bio::Tools::TargetP(3pm) | Results of one TargetP run. |
| Bio::Tools::Tmhmm(3pm) | Parse TMHMM output (TransMembrane HMM). |
| Bio::Tools::tRNAscanSE(3pm) | A parser for tRNAscan-SE output. |
| Bio::Tree::AlleleNode(3pm) | A Node with Alleles attached. |
| Bio::Tree::AnnotatableNode(3pm) | A Tree Node with support for annotation. |
| Bio::Tree::Compatible(3pm) | Testing compatibility of phylogenetic trees with nested taxa. |
| Bio::Tree::DistanceFactory(3pm) | Construct a tree using distance based methods. |
| Bio::Tree::Draw::Cladogram(3pm) | Drawing phylogenetic trees in Encapsulated PostScript (EPS) format. |
| Bio::Tree::Node(3pm) | A Simple Tree Node. |
| Bio::Tree::NodeI(3pm) | Interface describing a Tree Node. |
| Bio::Tree::NodeNHX(3pm) | A Simple Tree Node with support for NHX tags. |
| Bio::Tree::RandomFactory(3pm) | TreeFactory for generating Random Trees. |
| Bio::Tree::Statistics(3pm) | Calculate certain statistics for a Tree. |
| Bio::Tree::Tree(3pm) | An implementation of the TreeI interface. |
| Bio::Tree::TreeFunctionsI(3pm) | Decorated Interface implementing basic Tree exploration methods. |
| Bio::Tree::TreeI(3pm) | A Tree object suitable for lots of things, designed. |
| Bio::TreeIO(3pm) | Parser for Tree files. |
| Bio::TreeIO::cluster(3pm) | A TreeIO driver module for parsing Algorithm::Cluster::treecluster() output. |
| Bio::TreeIO::lintree(3pm) | Parser for lintree output trees. |
| Bio::TreeIO::newick(3pm) | … |
| Bio::TreeIO::NewickParser(3pm) | … |
| Bio::TreeIO::nexml(3pm) | A TreeIO driver module for parsing NeXML tree files. |
| Bio::TreeIO::nexus(3pm) | A TreeIO driver module for parsing Nexus tree output from PAUP. |
| Bio::TreeIO::nhx(3pm) | TreeIO implementation for parsing. |
| Bio::TreeIO::pag(3pm) | Bio::TreeIO driver for Pagel format. |
| Bio::TreeIO::phyloxml(3pm) | TreeIO implementation for parsing PhyloXML format. |
| Bio::TreeIO::svggraph(3pm) | A simple output format that converts a Tree object to an SVG output. |
| Bio::TreeIO::tabtree(3pm) | A simple output format which displays a tree as an ASCII drawing. |
| Bio::TreeIO::TreeEventBuilder(3pm) | Build Bio::Tree::Tree's and. |
| Bio::UpdateableSeqI(3pm) | Descendant of Bio::SeqI that allows updates. |
| Bio::Variation::AAChange(3pm) | Sequence change class for polypeptides. |
| Bio::Variation::AAReverseMutate(3pm) | Point mutation and codon. |
| Bio::Variation::Allele(3pm) | Sequence object with allele-specific attributes. |
| Bio::Variation::DNAMutation(3pm) | DNA level mutation class. |
| Bio::Variation::IO(3pm) | Handler for sequence variation IO Formats. |
| Bio::Variation::IO::flat(3pm) | Flat file sequence variation input/output stream. |
| Bio::Variation::IO::xml(3pm) | XML sequence variation input/output stream. |
| Bio::Variation::RNAChange(3pm) | Sequence change class for RNA level. |
| Bio::Variation::SeqDiff(3pm) | Container class for mutation/variant descriptions. |
| Bio::Variation::SNP(3pm) | Submitted SNP. |
| Bio::Variation::VariantI(3pm) | Sequence Change SeqFeature abstract class. |
| Bio::WebAgent(3pm) | A base class for Web (any protocol) access. |
| BIO_accept_ex(3ssl) ↣ BIO_connect(3ssl) | BIO socket communication setup. |
| BIO_ADDR(3ssl) | … |
| BIO_ADDR_clear(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_family(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_free(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_hostname_string(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_new(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_path_string(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_rawaddress(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_rawmake(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_rawport(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDR_service_string(3ssl) ↣ BIO_ADDR(3ssl) | … |
| BIO_ADDRINFO(3ssl) | … |
| BIO_ADDRINFO_address(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_ADDRINFO_family(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_ADDRINFO_free(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_ADDRINFO_next(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_ADDRINFO_protocol(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_ADDRINFO_socktype(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_append_filename(3ssl) ↣ BIO_s_file(3ssl) | … |
| BIO_bind(3ssl) ↣ BIO_connect(3ssl) | BIO socket communication setup. |
| BIO_callback_ctrl(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_callback_fn(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_callback_fn_ex(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_closesocket(3ssl) ↣ BIO_connect(3ssl) | BIO socket communication setup. |
| BIO_connect(3ssl) | BIO socket communication setup. |
| BIO_ctrl(3ssl) | … |
| BIO_ctrl_get_read_request(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_ctrl_get_write_guarantee(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_ctrl_pending(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_ctrl_reset_read_request(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_ctrl_wpending(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_debug_callback(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_destroy_bio_pair(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_do_accept(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_do_connect(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_do_handshake(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_eof(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_f_base64(3ssl) | Base64 BIO filter. |
| BIO_f_buffer(3ssl) | … |
| BIO_f_cipher(3ssl) | Cipher BIO filter. |
| BIO_f_md(3ssl) | Message digest BIO filter. |
| BIO_f_null(3ssl) | Null filter. |
| BIO_f_ssl(3ssl) | … |
| BIO_find_type(3ssl) | BIO chain traversal. |
| BIO_flush(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_free(3ssl) ↣ BIO_new(3ssl) | BIO allocation and freeing functions. |
| BIO_free_all(3ssl) ↣ BIO_new(3ssl) | BIO allocation and freeing functions. |
| BIO_get_accept_ip_family(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_get_accept_name(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_get_accept_port(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_get_bind_mode(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_get_buffer_num_lines(3ssl) ↣ BIO_f_buffer(3ssl) | … |
| BIO_get_callback(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_get_callback_arg(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_get_callback_ex(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_get_cipher_ctx(3ssl) ↣ BIO_f_cipher(3ssl) | Cipher BIO filter. |
| BIO_get_cipher_status(3ssl) ↣ BIO_f_cipher(3ssl) | Cipher BIO filter. |
| BIO_get_close(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_get_conn_address(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_get_conn_hostname(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_get_conn_ip_family(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_get_conn_port(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_get_data(3ssl) | Functions for. |
| BIO_get_ex_data(3ssl) ↣ BIO_get_ex_new_index(3ssl) | … |
| BIO_get_ex_new_index(3ssl) | … |
| BIO_get_fd(3ssl) ↣ BIO_s_fd(3ssl) | File descriptor BIO. |
| BIO_get_fp(3ssl) ↣ BIO_s_file(3ssl) | … |
| BIO_get_info_callback(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_get_init(3ssl) ↣ BIO_get_data(3ssl) | Functions for. |
| BIO_get_md(3ssl) ↣ BIO_f_md(3ssl) | Message digest BIO filter. |
| BIO_get_md_ctx(3ssl) ↣ BIO_f_md(3ssl) | Message digest BIO filter. |
| BIO_get_mem_data(3ssl) ↣ BIO_s_mem(3ssl) | … |
| BIO_get_mem_ptr(3ssl) ↣ BIO_s_mem(3ssl) | … |
| BIO_get_new_index(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_get_num_renegotiates(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_get_peer_name(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_get_peer_port(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_get_read_request(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_get_retry_BIO(3ssl) ↣ BIO_should_retry(3ssl) | … |
| BIO_get_retry_reason(3ssl) ↣ BIO_should_retry(3ssl) | … |
| BIO_get_shutdown(3ssl) ↣ BIO_get_data(3ssl) | Functions for. |
| BIO_get_ssl(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_get_write_buf_size(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_get_write_guarantee(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_gets(3ssl) ↣ BIO_read(3ssl) | BIO I/O functions. |
| BIO_hostserv_priorities(3ssl) ↣ BIO_parse_hostserv(3ssl) | Utility routines to parse a standard host and service string. |
| BIO_info_cb(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_int_ctrl(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_listen(3ssl) ↣ BIO_connect(3ssl) | BIO socket communication setup. |
| BIO_lookup(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_lookup_ex(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_lookup_type(3ssl) ↣ BIO_ADDRINFO(3ssl) | … |
| BIO_make_bio_pair(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_meth_free(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_callback_ctrl(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_create(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_ctrl(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_destroy(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_gets(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_puts(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_read(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_read_ex(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_write(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_get_write_ex(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_new(3ssl) | … |
| BIO_meth_set_callback_ctrl(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_create(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_ctrl(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_destroy(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_gets(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_puts(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_read(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_read_ex(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_write(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_meth_set_write_ex(3ssl) ↣ BIO_meth_new(3ssl) | … |
| BIO_method_type(3ssl) ↣ BIO_find_type(3ssl) | BIO chain traversal. |
| BIO_new(3ssl) | BIO allocation and freeing functions. |
| BIO_new_accept(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_new_bio_pair(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_new_buffer_ssl_connect(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_new_CMS(3ssl) | CMS streaming filter BIO. |
| BIO_new_connect(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_new_fd(3ssl) ↣ BIO_s_fd(3ssl) | File descriptor BIO. |
| BIO_new_file(3ssl) ↣ BIO_s_file(3ssl) | … |
| BIO_new_fp(3ssl) ↣ BIO_s_file(3ssl) | … |
| BIO_new_mem_buf(3ssl) ↣ BIO_s_mem(3ssl) | … |
| BIO_new_socket(3ssl) ↣ BIO_s_socket(3ssl) | Socket BIO. |
| BIO_new_ssl(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_new_ssl_connect(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_next(3ssl) ↣ BIO_find_type(3ssl) | BIO chain traversal. |
| BIO_parse_hostserv(3ssl) | Utility routines to parse a standard host and service string. |
| BIO_pending(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_pop(3ssl) ↣ BIO_push(3ssl) | Add and remove BIOs from a chain. |
| BIO_printf(3ssl) | Formatted output to a BIO. |
| BIO_ptr_ctrl(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_push(3ssl) | Add and remove BIOs from a chain. |
| BIO_puts(3ssl) ↣ BIO_read(3ssl) | BIO I/O functions. |
| BIO_read(3ssl) | BIO I/O functions. |
| BIO_read_ex(3ssl) ↣ BIO_read(3ssl) | BIO I/O functions. |
| BIO_read_filename(3ssl) ↣ BIO_s_file(3ssl) | … |
| BIO_reset(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_retry_type(3ssl) ↣ BIO_should_retry(3ssl) | … |
| BIO_rw_filename(3ssl) ↣ BIO_s_file(3ssl) | … |
| BIO_s_accept(3ssl) | … |
| BIO_s_bio(3ssl) | … |
| BIO_s_connect(3ssl) | … |
| BIO_s_fd(3ssl) | File descriptor BIO. |
| BIO_s_file(3ssl) | … |
| BIO_s_mem(3ssl) | … |
| BIO_s_null(3ssl) | Null data sink. |
| BIO_s_secmem(3ssl) ↣ BIO_s_mem(3ssl) | … |
| BIO_s_socket(3ssl) | Socket BIO. |
| BIO_seek(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_set_accept_bios(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_set_accept_ip_family(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_set_accept_name(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_set_accept_port(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_set_bind_mode(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_set_buffer_read_data(3ssl) ↣ BIO_f_buffer(3ssl) | … |
| BIO_set_buffer_size(3ssl) ↣ BIO_f_buffer(3ssl) | … |
| BIO_set_callback(3ssl) | … |
| BIO_set_callback_arg(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_set_callback_ex(3ssl) ↣ BIO_set_callback(3ssl) | … |
| BIO_set_cipher(3ssl) ↣ BIO_f_cipher(3ssl) | Cipher BIO filter. |
| BIO_set_close(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_set_conn_address(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_set_conn_hostname(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_set_conn_ip_family(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_set_conn_port(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_set_data(3ssl) ↣ BIO_get_data(3ssl) | Functions for. |
| BIO_set_ex_data(3ssl) ↣ BIO_get_ex_new_index(3ssl) | … |
| BIO_set_fd(3ssl) ↣ BIO_s_fd(3ssl) | File descriptor BIO. |
| BIO_set_fp(3ssl) ↣ BIO_s_file(3ssl) | … |
| BIO_set_info_callback(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_set_init(3ssl) ↣ BIO_get_data(3ssl) | Functions for. |
| BIO_set_md(3ssl) ↣ BIO_f_md(3ssl) | Message digest BIO filter. |
| BIO_set_mem_buf(3ssl) ↣ BIO_s_mem(3ssl) | … |
| BIO_set_mem_eof_return(3ssl) ↣ BIO_s_mem(3ssl) | … |
| BIO_set_nbio(3ssl) ↣ BIO_s_connect(3ssl) | … |
| BIO_set_nbio_accept(3ssl) ↣ BIO_s_accept(3ssl) | … |
| BIO_set_next(3ssl) ↣ BIO_push(3ssl) | Add and remove BIOs from a chain. |
| BIO_set_read_buffer_size(3ssl) ↣ BIO_f_buffer(3ssl) | … |
| BIO_set_retry_reason(3ssl) ↣ BIO_should_retry(3ssl) | … |
| BIO_set_shutdown(3ssl) ↣ BIO_get_data(3ssl) | Functions for. |
| BIO_set_ssl(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_set_ssl_mode(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_set_ssl_renegotiate_bytes(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_set_ssl_renegotiate_timeout(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_set_write_buf_size(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_set_write_buffer_size(3ssl) ↣ BIO_f_buffer(3ssl) | … |
| BIO_should_io_special(3ssl) ↣ BIO_should_retry(3ssl) | … |
| BIO_should_read(3ssl) ↣ BIO_should_retry(3ssl) | … |
| BIO_should_retry(3ssl) | … |
| BIO_should_write(3ssl) ↣ BIO_should_retry(3ssl) | … |
| BIO_shutdown_wr(3ssl) ↣ BIO_s_bio(3ssl) | … |
| BIO_snprintf(3ssl) ↣ BIO_printf(3ssl) | Formatted output to a BIO. |
| BIO_socket(3ssl) ↣ BIO_connect(3ssl) | BIO socket communication setup. |
| BIO_ssl_copy_session_id(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_ssl_shutdown(3ssl) ↣ BIO_f_ssl(3ssl) | … |
| BIO_tell(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_up_ref(3ssl) ↣ BIO_new(3ssl) | BIO allocation and freeing functions. |
| BIO_vfree(3ssl) ↣ BIO_new(3ssl) | BIO allocation and freeing functions. |
| BIO_vprintf(3ssl) ↣ BIO_printf(3ssl) | Formatted output to a BIO. |
| BIO_vsnprintf(3ssl) ↣ BIO_printf(3ssl) | Formatted output to a BIO. |
| BIO_wpending(3ssl) ↣ BIO_ctrl(3ssl) | … |
| BIO_write(3ssl) ↣ BIO_read(3ssl) | BIO I/O functions. |
| BIO_write_ex(3ssl) ↣ BIO_read(3ssl) | BIO I/O functions. |
| BIO_write_filename(3ssl) ↣ BIO_s_file(3ssl) | … |
| bioblend(1) | BioBlend Documentation. |
| BioCocoa(3) | Bioinformatics framework for GNUstep and Cocoa. |
| biof(1) | Rotating stack of quads. |
| biogenesis(1) | Biogenesis, an artificial life program focused on evolution. |
| biolatency-bpfcc(8) | Summarize block device I/O latency as a histogram. |
| bioradtopgm(1) | Convert a Biorad confocal file into a portable graymap. |
| bios(9freebsd) | Interact with PC BIOS. |
| biosdecode(8) | BIOS information decoder. |
| biosdevname(1) | Give BIOS-given name of a device. |
| biosed(1e) | Replace or delete sequence sections. |
| biosinfo(8) | Shows type, revision and vendor of the mainboard as well as vendor version and release date of the. |
| biosnoop-bpfcc(8) | Trace block device I/O and print details incl. issuing PID. |
| biotop-bpfcc(8) | Block device (disk) I/O by process top. |
| bip(1) | BIP IRC Proxy. |
| bip.conf(5) | Configuration file for BIP IRC Proxy. |
| bip32gen(1) | Create hierarchical deterministic wallet addresses. |
| bipgenconfig(1) | BIP IRC Proxy configuration program. |
| bipmkpw(1) | Password hasher for BIP. |
| bird(8) | BIRD Internet Routing Daemon. |
| bird6(8) ↣ bird(8) | BIRD Internet Routing Daemon. |
| birdc(8) ↣ bird(8) | BIRD Internet Routing Daemon. |
| birdc6(8) ↣ bird(8) | BIRD Internet Routing Daemon. |
| birdfont(1) | Font editor. |
| birdfont-autotrace(1) | Convert raster image to vector graphics. |
| birdfont-export(1) | Generate TTF, EOT and SVG files from FFI-files. |
| birdfont-import(1) | Create a font from SVG files. |
| birthday(1) | Warn about upcoming birthdays and other events. |
| bison(1) | GNU Project parser generator (yacc replacement). |
| bison++(1) | Generate a parser in c or c++. |
| bison++.yacc(1) | GNU Project parser generator (yacc replacement). |
| bison.yacc(1) | GNU Project parser generator. |
| bisonc++(1) | Generate a C++ parser class and parsing function. |
| bisonc++api(3) | Application programmer’s interface of bisonc++ generated classes. |
| bisonc++input(7) | Organization of bisonc++’s grammar file(s). |
| bisque(3pm) ↣ Tk::palette(3pm) | Modify the Tk color palette. |
| bist(1) | A chemical drawing tool. |
| bit2fp(1) | Bitstream to floorplan. |
| Bit::Vector(3pm) | Efficient bit vector, set of integers and "big int" math library. |
| Bit::Vector::Minimal(3pm) | Object-oriented wrapper around vec(). |
| Bit::Vector::Overload(3pm) | Overloaded operators add-on for Bit::Vector. |
| Bit::Vector::String(3pm) | Generic string import/export for Bit::Vector. |
| bit_alloc(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| BIT_AND(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_AND_ATOMIC(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bit_clear(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| BIT_CLR(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_CLR_ATOMIC(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_CMP(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_COPY(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_COPY_STORE_REL(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_COUNT(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bit_decl(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| BIT_EMPTY(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bit_ffc(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| bit_ffs(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| BIT_FFS(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_FILL(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bit_is_clear(3avr) ↣ avr_sfr(3avr) | … |
| bit_is_set(3avr) ↣ avr_sfr(3avr) | … |
| BIT_ISFULLSET(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_ISSET(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_NAND(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bit_nclear(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| bit_nset(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| BIT_OR(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_OR_ATOMIC(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_OVERLAP(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bit_set(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| BIT_SET(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_SET_ATOMIC(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_SET_ATOMIC_ACQ(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_SETOF(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BIT_SUBSET(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bit_test(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| BIT_ZERO(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bitarr(3pub) | … |
| bitCount(3G) | Counts the number of 1 bits in an integer. |
| bitesize(1) | Add bitesize tag to bugs and add a comment. |
| bitesize-bpfcc(8) | Summarize block device I/O size as a histogram - Linux eBPF/bcc. |
| bitesize-perf(8) | Show disk I/O size as a histogram. Uses Linux perf_events. |
| bitfieldExtract(3G) | Extract a range of bits from an integer. |
| bitfieldInsert(3G) | Insert a range of bits into an integer. |
| bitfieldReverse(3G) | Reverse the order of bits in an integer. |
| bitlbee(8) | IRC gateway to IM chat networks. |
| bitlbee.conf(5) | Configuration file for bitlbee(8). |
| bitmap(1) | Bitmap editor and converter utilities for the X Window System. |
| BITMAP(3alleg4) | Stores the contents of a bitmap. Allegro game programming library. |
| bitmap(3tk) | Images that display two colors. |
| bitmap-editor(1) | Editor for XBM images. |
| bitmap2component(1) | Converts a bitmap graphic into a footprint or component. |
| bitmap_color_depth(3alleg4) | Returns the color depth of the specified bitmap. Allegro game programming library. |
| bitmap_mask_color(3alleg4) | Returns the mask color of the specified bitmap. Allegro game programming library. |
| BitmapBitOrder(3) ↣ ImageByteOrder(3) | … |
| BitmapPad(3) ↣ ImageByteOrder(3) | … |
| BitmapUnit(3) ↣ ImageByteOrder(3) | … |
| bitselect(3clc) | Each bit of result is corresponding bit of a if corresponding bit of c is 0. |
| bitset(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BITSET_DEFINE(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BITSET_FSET(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| BITSET_T_INITIALIZER(9freebsd) | BITSET_DEFINE, BITSET_T_INITIALIZER, BITSET_FSET, BIT_CLR, BIT_COPY, BIT_ISSET, BIT_SET, BIT_ZERO,. |
| bitstormlite(1) | BitTorrent Client based on C++/Gtk+2.0. |
| bitstr_size(3bsd) ↣ bitstring(3bsd) | Bit-string. |
| bitstring(3bsd) | Bit-string. |
| bitten-slave(1) | Performs a build and sends result to the Bitten master. |
| bittorrent-downloader.bittornado(1) | Download files using a scatter-gather network. |
| bittorrent-downloader.bittorrent(1) | Download files using a scatter-gather network. |
| bittorrent-multi-downloader.bittornado(1) | Download multiple files using a scatter-gather network. |
| bittorrent-multi-downloader.bittorrent(1) | Multiple file clients for bittorrent. |
| bittwist(1) | … |
| bittwiste(1) | … |
| bitz-server(1) | An ICAP server. |
| bitz-server.conf(5) | Bitz-server configuration file. |
| bivar(3NCARG) | Provides bivariate interpolation and smooth surface fitting for values given at irregularly. |
| bivar_params(3NCARG) | This document briefly describes all Bivar parameters. |
| bjam(1) | Software build tool. |
| bkchem(1) | A free chemical drawing program. |
| bkgd(3ncurses) | Curses window background manipulation routines. |
| bkgdset(3ncurses) ↣ bkgd(3ncurses) | Curses window background manipulation routines. |
| bkgrnd(3ncurses) | Curses window complex background manipulation. |
| bkgrndset(3ncurses) ↣ bkgrnd(3ncurses) | Curses window complex background manipulation. |
| bktr(4freebsd) | Brooktree Bt848/849/878/879 and Pinnacle PCTV video capture driver. |
| black-box(6) | Find the crystals. |
| black_palette(3alleg4) | A palette containing solid black colors. Allegro game programming library. |
| blackbox(1) | A window manager for X11. |
| blackhole(4freebsd) | A sysctl(8) MIB for manipulating behaviour in respect of refused SCTP, TCP, or UDP connection. |
| blackhole(6) | Draws funny things on an XDisplay. |
| blackhole6(1) | A tool to find IPv6 blackholes. |
| BlackPixel(3) ↣ AllPlanes(3) | … |
| BlackPixelOfScreen(3) | … |
| bladeRF-cli(1) | Command line interface and test utility. |
| bladeRF-install-firmware(1) | BladeRF Firmware Utility. |
| blahtexml(1) | Converts TeX equations into MathML. |
| blake2(3) | … |
| blame(1) | Annotate RCS files. |
| blas(3) | … |
| blast_top_hits(1) | Reduces a blast or blat output file to the top hit for each query sequence only. |
| blaster(6x) | Simulation of space combat. |
| blastesting(3) | … |
| blat2gff(1) | Converts BLAT output files to GFF formatted files. |
| blaze(1) | Allows you to run BlazeBlogger utilities with a single command. |
| blaze-add(1) | Adds a blog post or a page to the BlazeBlogger repository. |
| blaze-config(1) | Displays or sets BlazeBlogger configuration options. |
| blaze-edit(1) | Edits a blog post or a page in the BlazeBlogger repository. |
| blaze-init(1) | Creates or recovers a BlazeBlogger repository. |
| blaze-list(1) | Lists blog posts or pages in the BlazeBlogger repository. |
| blaze-log(1) | Displays the BlazeBlogger repository log. |
| blaze-make(1) | Generates a blog from the BlazeBlogger repository. |
| blaze-remove(1) | Removes a post or page from the BlazeBlogger repository. |
| blazer_ser(8) | Driver for Megatec/Q1 protocol serial based UPS equipment. |
| blazer_usb(8) | Driver for Megatec/Q1 protocol USB based UPS equipment. |
| bld(8) | A black list daemon. |
| bld-mrtg(8) | Return MRTG-friendly statistics about local BLD status. |
| bld-pf_log(8) | Feed BLD with Postifx log files. |
| bld-pf_policy(8) | BLD policy server for Postfix. |
| bld.conf(5) | Configuration file for BLD. |
| bld_acl.conf(5) | Access lists for BLD. |
| bld_whitelist.conf(5) | White lists for BLD. |
| blddecr(8) | Decrement the counter of an IP address on a bld host. |
| bldinsert(8) | Submit an IP address to a bld host. |
| bldquery(8) | Query a bld host. |
| bldread(8) | Read bld dumps. |
| bldsubmit(8) | Submit an IP address to a bld host. |
| bleachbit(1) | Delete unnecessary files from the system. |
| blend-role(8) | Add/remove roles in registered Debian Pure Blend. |
| blend-update-menus(8) | Add menu of meta package to all Debian Pure Blend users. |
| blend-update-usermenus(8) | Update user menus of all Debian Pure Blend users. |
| blend-user(8) | Add/remove user to Role of a registered Debian Pure Blend. |
| blender(1) | A 3D modelling and rendering package. |
| blender(3x) | Functionality for blending of image data using diofferent algorithms libAfterImage/blender.h. |
| blenderplayer(1) | The blender game engine runner. |
| bless(1) | Graphical hexadecimal Gtk# editor. |
| bley(1) | Intelligent greylisting daemon for Postfix. |
| bleygraph(1) | Stats plotter for bley. |
| blhc(1) | Build log hardening check, checks build logs for missing hardening flags. |
| blib(3perl) | Use MakeMaker's uninstalled version of a package. |
| blinkbox(6x) | Shows a ball inside a box. |
| blinken(6) | A memory enhancement game. |
| bliss(1) | Compute automorphism groups and canonical labelings of graphs. |
| blit(3alleg4) | Copies a rectangular area from one bitmap to another. Allegro game programming library. |
| blitspin(6x) | Rotate a bitmap in an interesting way. |
| blitztest(1) | Program to test blitz imaging filter library. |
| blixem(1) | Display multiple alignments against a reference sequence. |
| blixemh(1) | Display multiple alignments against a reference sequence. |
| blkcalc(1) | Converts between unallocated disk unit numbers and regular disk unit numbers. |
| blkcat(1) | Display the contents of file system data unit in a disk image. |
| blkdeactivate(8) | Utility to deactivate block devices. |
| blkdiscard(8) | Discard sectors on a device. |
| blkid(8) | Locate/print block device attributes. |
| blkiomon(8) | Monitor block device I/O based o blktrace data. |
| blkls(1) | List or output file system data units. |
| blkmapd(8) | PNFS block layout mapping daemon. |
| blkparse(1) | Produce formatted output of event streams of block devices. |
| blkrawverify(1) | Verifies an output file produced by blkparse. |
| blkreplay(1) | Block device testing and benchmarking tool. |
| blkstat(1) | Display details of a file system data unit (i.e. block or sector). |
| blktool(8) | Display or change block device settings. |
| blktrace(8) | Generate traces of the i/o traffic on block devices. |
| blobAndConquer(6) | 3D platform shooting game. |
| blobby(6) | A volleyball game with blobs. |
| blobby-server(6) | A volleyball game with blobs. |
| bloboats(6) | A boat racing game. |
| blobwars(6) | Platform shooting game. |
| blockattack(6) | A puzzle game inspired by Tetris Attack. |
| blockdev(8) | Call block device ioctls from the command line. |
| blockdiag(1) | Generate block-diagram image file from spec-text file. |
| blockdiag3(1) | Generate block-diagram image file from spec-text file. |
| blockfinder(1) | Enumerates network information for countries. |
| blockmean(1gmt) | Block average (x, y, z) data tables by L2 norm. |
| blockmedian(1gmt) | Block average (x, y, z) data tables by L1 norm. |
| blockMesh(1) | Is the part of OpenFOAM - a free, open source CFD software. |
| blockmode(1gmt) | Block average (x, y, z) data tables by mode estimation. |
| blockout2(6) | The tetris like game (3D tetris). |
| blocks-of-the-undead(6) ↣ BlocksOfTheUndead(6) | Tetris Attack clone with spooky undertones. |
| BlocksOfTheUndead(6) | Tetris Attack clone with spooky undertones. |
| blocktube(6x) | Draws a swirling, falling tunnel of reflective slabs. |
| blogin(1) ↣ clogin(1) | Cisco login script. |
| BlogLiterately(1) | Post articles to blogs from command line. |
| blogofile(1) | Static website compiler and blog engine. |
| bloom(1) | Utility to work with Bloom filters. |
| Bloom::Filter(3pm) | Sample Perl Bloom filter implementation. |
| blosxom(7) | A lightweight yet feature-packed weblog. |
| blowfish(3tcl) | Implementation of the Blowfish block cipher. |
| bls(8) | Bacula's 'Tape LS'. |
| bls-standalone(1) | Build log scanner, standalone version. |
| blt::barchart(3tcl) | Bar chart for plotting X-Y coordinate data. |
| blt::beep(3tcl) | Ring the bell. |
| blt::bgexec(3tcl) | Run programs in the background while handling Tk events. kill - Terminate program or send signal. |
| blt::bitmap(3tcl) | Define a new bitmap from a Tcl script. |
| blt::bltdebug(3tcl) | Print Tcl commands before execution. |
| blt::busy(3tcl) | Make Tk widgets busy, temporarily blocking user interactions. |
| blt::container(3tcl) | Widget to contain a foreign window. |
| blt::cutbuffer(3tcl) | Manipulate X cut buffer properties. |
| blt::dragdrop(3tcl) | Facilities for handling drag&drop data transfers. |
| blt::eps(3tcl) | Encapsulated PostScript canvas item. |
| blt::graph(3tcl) | 2D graph for plotting X-Y coordinate data. |
| blt::hierbox(3tcl) | Create and manipulate hierarchical table widgets. |
| blt::hiertable(3tcl) | Create and manipulate hierarchical table widgets. |
| blt::htext(3tcl) | Create and manipulate hypertext widgets. |
| blt::intro(3tcl) | Introduction to the BLT library. |
| blt::spline(3tcl) | Fit curves with spline interpolation. |
| blt::stripchart(3tcl) | 2D strip chart for plotting x and y coordinate data. |
| blt::table(3tcl) | Arranges widgets in a table. |
| blt::tabset(3tcl) | Create and manipulate tabset widgets. |
| blt::tile(3tcl) | Tiling versions of Tk widgets. |
| blt::tree(3tcl) | Create and manage tree data objects. |
| blt::treeview(3tcl) | Create and manipulate hierarchical table widgets. |
| blt::vector(3tcl) | Vector data type for Tcl. |
| blt::watch(3tcl) | Call Tcl procedures before and after each command. |
| blt::winop(3tcl) | Perform assorted window and image operations. |
| Blt_Tree(3) | Tree data object. |
| Blt_TreeCreate(3) | Create tree data object. |
| Blt_TreeCreateNode(3) | Creates a node in a tree data object. |
| Blt_TreeDeleteNode(3) | Deletes a node and its descendants. |
| Blt_TreeExists(3) | Indicates if a tree exists. |
| Blt_TreeGetNode(3) | Finds the node from the ID. |
| Blt_TreeGetToken(3) | Grabs a token associated with existing tree data object. |
| Blt_TreeName(3) | Returns the name of the tree data object. |
| Blt_TreeNodeId(3) | Returns the node serial number. |
| Blt_TreeReleaseToken(3) | Releases token associated with tree object. |
| bluefeather(1) | Bluefeather. |
| bluefish(1) | Editor for experienced web designers and programmers. |
| blueman-adapters(1) | An utility to set adapter properties. |
| blueman-applet(1) | A tray applet for managing bluetooth. |
| blueman-assistant(1) | Application for configuring and pairing bluetooth devices. |
| blueman-browse(1) | Helper application for launching an obex browser. |
| blueman-manager(1) | Bluetooth device manager. |
| blueman-report(1) | A tool to create a commented log and upload it to GitHub for support or bug reports. |
| blueman-sendto(1) | Application for sending files to bluetooth devices. |
| blueman-services(1) | Configure local bluetooth services. |
| bluemon(1) | Activate or deactivate programs based on bluetooth link quality. |
| bluemon-client(1) | Activate or deactivate programs based on bluetooth link quality. |
| bluemon-dbus(7) | DBUS interface to bluemon(1). |
| bluemon-query(1) | Query the state of and send commands to bluemon(1). |
| bluemoon(1) | Bluemoon configuration utility. |
| blueproximity(1) | Locks/unlocks your desktop tracking a bluetooth device. |
| bluetooth(1) | Enable/disable internal bluetooth device. |
| bluetooth-sendto(1) | GTK application for transferring files over Bluetooth. |
| bluetooth-wizard(1) | GTK wizard for setting up devices with the Linux Bluetooth stack. |
| bluetoothctl(1) | Bluetooth control tool. |
| bluetoothd(8) | Bluetooth daemon. |
| bluewho(1) | Information and notification of new discovered bluetooth devices. |
| bmake(1) | Maintain program dependencies. |
| bmaptool(1) | Create block map (bmap) for a file or copy a file using bmap. |
| bmc-config(8) ↣ ipmi-config(8) | Configure IPMI values. |
| bmc-device(8) | Perform advanced BMC commands. |
| bmc-info(8) | Display BMC information. |
| bmc-watchdog(8) | BMC watchdog timer daemon and control utility. |
| bmf(1) | Efficient Bayesian mail filter. |
| bmfconv(1) | Database converter for bmf. |
| bmon(8) | Bandwidth monitor and rate estimator. |
| bmore(1) | Browse through a binary file. |
| bmp(1) | Babel universal macro processor. |
| bmp_read_line(3alleg4) | Direct access bank switching line selection for reading. Allegro game programming library. |
| bmp_unwrite_line(3alleg4) | Direct access bank switching line release. Allegro game programming library. |
| bmp_write_line(3alleg4) | Direct access bank switching line selection for writing. Allegro game programming library. |
| bmptopnm(1) | Convert a BMP file into a portable anymap. |
| bmptoppm(1) ↣ bmptopnm(1) | Convert a BMP file into a portable anymap. |
| bmtoa(1) ↣ bitmap(1) | Bitmap editor and converter utilities for the X Window System. |
| BN_add(3ssl) | … |
| BN_add_word(3ssl) | Arithmetic functions on BIGNUMs with. |
| BN_bin2bn(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_BLINDING_convert(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_convert_ex(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_create_param(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_free(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_get_flags(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_invert(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_invert_ex(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_is_current_thread(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_lock(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_set_current_thread(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_set_flags(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_unlock(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_BLINDING_update(3ssl) ↣ BN_BLINDING_new(3ssl) | … |
| BN_bn2bin(3ssl) | … |
| BN_bn2binpad(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_bn2dec(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_bn2hex(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_bn2lebinpad(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_bn2mpi(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_clear(3ssl) ↣ BN_new(3ssl) | Allocate and free BIGNUMs. |
| BN_clear_bit(3ssl) ↣ BN_set_bit(3ssl) | Bit. |
| BN_clear_free(3ssl) ↣ BN_new(3ssl) | Allocate and free BIGNUMs. |
| BN_cmp(3ssl) | BIGNUM comparison and test functions. |
| BN_copy(3ssl) | Copy BIGNUMs. |
| BN_CTX_end(3ssl) ↣ BN_CTX_start(3ssl) | Use temporary BIGNUM variables. |
| BN_CTX_free(3ssl) ↣ BN_CTX_new(3ssl) | Allocate and free BN_CTX structures. |
| BN_CTX_get(3ssl) ↣ BN_CTX_start(3ssl) | Use temporary BIGNUM variables. |
| BN_CTX_new(3ssl) | Allocate and free BN_CTX structures. |
| BN_CTX_secure_new(3ssl) ↣ BN_CTX_new(3ssl) | Allocate and free BN_CTX structures. |
| BN_CTX_start(3ssl) | Use temporary BIGNUM variables. |
| BN_dec2bn(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_div(3ssl) ↣ BN_add(3ssl) | … |
| BN_div_recp(3ssl) ↣ BN_mod_mul_reciprocal(3ssl) | Modular. |
| BN_div_word(3ssl) ↣ BN_add_word(3ssl) | Arithmetic functions on BIGNUMs with. |
| BN_dup(3ssl) ↣ BN_copy(3ssl) | Copy BIGNUMs. |
| BN_exp(3ssl) ↣ BN_add(3ssl) | … |
| BN_free(3ssl) ↣ BN_new(3ssl) | Allocate and free BIGNUMs. |
| BN_from_montgomery(3ssl) ↣ BN_mod_mul_montgomery(3ssl) | … |
| BN_gcd(3ssl) ↣ BN_add(3ssl) | … |
| BN_GENCB_call(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_GENCB_free(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_GENCB_get_arg(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_GENCB_new(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_GENCB_set(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_GENCB_set_old(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_generate_prime(3ssl) | … |
| BN_generate_prime_ex(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_get0_nist_prime_192(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get0_nist_prime_224(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get0_nist_prime_256(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get0_nist_prime_384(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get0_nist_prime_521(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc2409_prime_1024(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc2409_prime_768(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc3526_prime_1536(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc3526_prime_2048(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc3526_prime_3072(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc3526_prime_4096(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc3526_prime_6144(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_rfc3526_prime_8192(3ssl) ↣ DH_get_1024_160(3ssl) | … |
| BN_get_word(3ssl) ↣ BN_zero(3ssl) | BIGNUM assignment operations. |
| BN_hex2bn(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_is_bit_set(3ssl) ↣ BN_set_bit(3ssl) | Bit. |
| BN_is_odd(3ssl) ↣ BN_cmp(3ssl) | BIGNUM comparison and test functions. |
| BN_is_one(3ssl) ↣ BN_cmp(3ssl) | BIGNUM comparison and test functions. |
| BN_is_prime(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_is_prime_ex(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_is_prime_fasttest(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_is_prime_fasttest_ex(3ssl) ↣ BN_generate_prime(3ssl) | … |
| BN_is_word(3ssl) ↣ BN_cmp(3ssl) | BIGNUM comparison and test functions. |
| BN_is_zero(3ssl) ↣ BN_cmp(3ssl) | BIGNUM comparison and test functions. |
| BN_lebin2bn(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_lshift(3ssl) ↣ BN_set_bit(3ssl) | Bit. |
| BN_lshift1(3ssl) ↣ BN_set_bit(3ssl) | Bit. |
| BN_mask_bits(3ssl) ↣ BN_set_bit(3ssl) | Bit. |
| BN_mod(3ssl) ↣ BN_add(3ssl) | … |
| BN_mod_add(3ssl) ↣ BN_add(3ssl) | … |
| BN_mod_exp(3ssl) ↣ BN_add(3ssl) | … |
| BN_mod_inverse(3ssl) | Compute inverse modulo n. |
| BN_mod_mul(3ssl) ↣ BN_add(3ssl) | … |
| BN_mod_mul_montgomery(3ssl) | … |
| BN_mod_mul_reciprocal(3ssl) | Modular. |
| BN_mod_sqr(3ssl) ↣ BN_add(3ssl) | … |
| BN_mod_sub(3ssl) ↣ BN_add(3ssl) | … |
| BN_mod_word(3ssl) ↣ BN_add_word(3ssl) | Arithmetic functions on BIGNUMs with. |
| BN_MONT_CTX_copy(3ssl) ↣ BN_mod_mul_montgomery(3ssl) | … |
| BN_MONT_CTX_free(3ssl) ↣ BN_mod_mul_montgomery(3ssl) | … |
| BN_MONT_CTX_new(3ssl) ↣ BN_mod_mul_montgomery(3ssl) | … |
| BN_MONT_CTX_set(3ssl) ↣ BN_mod_mul_montgomery(3ssl) | … |
| BN_mpi2bn(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_mul(3ssl) ↣ BN_add(3ssl) | … |
| BN_mul_word(3ssl) ↣ BN_add_word(3ssl) | Arithmetic functions on BIGNUMs with. |
| BN_new(3ssl) | Allocate and free BIGNUMs. |
| BN_nnmod(3ssl) ↣ BN_add(3ssl) | … |
| BN_num_bits(3ssl) ↣ BN_num_bytes(3ssl) | Get BIGNUM size. |
| BN_num_bits_word(3ssl) ↣ BN_num_bytes(3ssl) | Get BIGNUM size. |
| BN_num_bytes(3ssl) | Get BIGNUM size. |
| BN_one(3ssl) ↣ BN_zero(3ssl) | BIGNUM assignment operations. |
| BN_print(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_print_fp(3ssl) ↣ BN_bn2bin(3ssl) | … |
| BN_priv_rand(3ssl) ↣ BN_rand(3ssl) | Generate. |
| BN_priv_rand_range(3ssl) ↣ BN_rand(3ssl) | Generate. |
| BN_pseudo_rand(3ssl) ↣ BN_rand(3ssl) | Generate. |
| BN_pseudo_rand_range(3ssl) ↣ BN_rand(3ssl) | Generate. |
| BN_rand(3ssl) | Generate. |
| BN_rand_range(3ssl) ↣ BN_rand(3ssl) | Generate. |
| BN_RECP_CTX_free(3ssl) ↣ BN_mod_mul_reciprocal(3ssl) | Modular. |
| BN_RECP_CTX_new(3ssl) ↣ BN_mod_mul_reciprocal(3ssl) | Modular. |
| BN_RECP_CTX_set(3ssl) ↣ BN_mod_mul_reciprocal(3ssl) | Modular. |
| BN_rshift(3ssl) ↣ BN_set_bit(3ssl) | Bit. |
| BN_rshift1(3ssl) ↣ BN_set_bit(3ssl) | Bit. |
| BN_secure_new(3ssl) ↣ BN_new(3ssl) | Allocate and free BIGNUMs. |
| BN_security_bits(3ssl) | Returns bits of security based on given numbers. |
| BN_set_bit(3ssl) | Bit. |
| BN_set_word(3ssl) ↣ BN_zero(3ssl) | BIGNUM assignment operations. |
| BN_sqr(3ssl) ↣ BN_add(3ssl) | … |
| BN_sub(3ssl) ↣ BN_add(3ssl) | … |
| BN_sub_word(3ssl) ↣ BN_add_word(3ssl) | Arithmetic functions on BIGNUMs with. |
| BN_swap(3ssl) | Exchange BIGNUMs. |
| BN_to_ASN1_ENUMERATED(3ssl) ↣ ASN1_INTEGER_get_int64(3ssl) | … |
| BN_to_ASN1_INTEGER(3ssl) ↣ ASN1_INTEGER_get_int64(3ssl) | … |
| BN_to_montgomery(3ssl) ↣ BN_mod_mul_montgomery(3ssl) | … |
| BN_ucmp(3ssl) ↣ BN_cmp(3ssl) | BIGNUM comparison and test functions. |
| BN_value_one(3ssl) ↣ BN_zero(3ssl) | BIGNUM assignment operations. |
| BN_with_flags(3ssl) ↣ BN_copy(3ssl) | Copy BIGNUMs. |
| BN_zero(3ssl) | BIGNUM assignment operations. |
| bnbot(1) | Battle.net text-based chat bot client. |
| bnchat(1) | Battle.net text-based chat client. |
| bnd(1) | Create and diagnose OSGi bundles. |
| bnetd(1) | Unix Battle.net daemon. |
| bnetd.conf(5) | Configuration for the Unix Battle.net daemon. |
| bnftp(1) | Battle.net file transfer client. |
| bni2tga(1) | Convert a Battle.net icon file to a Targa file. |
| bnibuild(1) | Build a Battle.net icon file from a directory of Targa icon files. |
| bniextract(1) | Extract a directory of Targa icon files from a Battle.net icon file. |
| bnilist(1) | List contents of a Battle.net icon file. |
| bno_plot(1) | Generate interactive 3D plot of IO blocks and sizes. |
| bnpass(1) | Bnetd password utility. |
| bnstat(1) | Battle.net statisics client. |
| bntext(5) | Messages for the Unix Battle.net daemon. |
| bntrackd(1) | Bnetd tracking daemon. |
| bnxt(4freebsd) | Broadcom NetXtreme-C/NetXtreme-E Family Ethernet driver. |
| boa-constructor(1) | RAD tool for Python and WxWindows. |
| boats(1) | A race scenario drawing tool. |
| bobcat(7) | Overview of classes in the Bobcat library. |
| bochs(1) | Portable x86 Emulator. |
| bochs-bin(1) ↣ bochs(1) | Portable x86 Emulator. |
| bochsrc(5) | Configuration file for Bochs. |
| body(3itcl) | Change the body for a class method/proc. |
| boggle(6) | Word search game. |
| bogofilter(1) | Fast Bayesian spam filter. |
| bogofilter-bdb(1) ↣ bogofilter(1) | Fast Bayesian spam filter. |
| bogofilter-sqlite(1) ↣ bogofilter(1) | Fast Bayesian spam filter. |
| bogolexer(1) | Utility program for separating email messages into tokens. |
| bogolexer-bdb(1) ↣ bogolexer(1) | Utility program for separating email messages into tokens. |
| bogolexer-sqlite(1) ↣ bogolexer(1) | Utility program for separating email messages into tokens. |
| bogotune(1) | Find optimum parameter settings for bogofilter. |
| bogotune-bdb(1) ↣ bogotune(1) | Find optimum parameter settings for bogofilter. |
| bogotune-sqlite(1) ↣ bogotune(1) | Find optimum parameter settings for bogofilter. |
| bogoupgrade(1) | Upgrades bogofilter database to current version. |
| bogoupgrade-bdb(1) ↣ bogoupgrade(1) | Upgrades bogofilter database to current version. |
| bogoupgrade-sqlite(1) ↣ bogoupgrade(1) | Upgrades bogofilter database to current version. |
| bogoutil(1) | Dumps, loads, and maintains bogofilter database files. |
| bogoutil-bdb(1) ↣ bogoutil(1) | Dumps, loads, and maintains bogofilter database files. |
| bogoutil-sqlite(1) ↣ bogoutil(1) | Dumps, loads, and maintains bogofilter database files. |
| boinc(1) | The BOINC client program. |
| boinccmd(1) | The command line interface to the BOINC client. |
| boincmgr(1) | The graphical BOINC manager for the client. |
| boinctui(1) | Fullscreen text mode manager for BOINC client. |
| boing(6x) | Draws a bouncing ball like the ancient Amiga demo. |
| bombardier(6) | The GNU Bombing utility. |
| bombardment(1) | Run siege with an ever-increasing number of users. |
| bomberclone(6) | Free Bomberman-like game. |
| bombono-dvd(1) | DVD authoring program with nice and clean GUI. |
| bomstrip(1) | Strip the BOM sequence from UTF-8 files. |
| bomstrip-files(1) ↣ bomstrip(1) | Strip the BOM sequence from UTF-8 files. |
| bon_csv2html(1) | … |
| bon_csv2txt(1) ↣ bon_csv2html(1) | … |
| bond2team(1) | Converts bonding configuration to team. |
| Bonds(1) | Example of bond pricing. |
| bones-info(1) | Display information about a Nethack bones file. |
| bonnie++(8) | Program to test hard drive performance. |
| bonobo-activation-server(1) | GNOME component tracker. |
| boobank(1) | Manage bank accounts. |
| boobathon(1) | Participate in a Boobathon. |
| boobcoming(1) | See upcoming events. |
| boobill(1) | Get/download documents and bills. |
| booblyrics(1) | Search and display song lyrics. |
| boobmsg(1) | Send and receive message threads. |
| boobooks(1) | Manage rented books. |
| boobsize(1) | Display sensors and gauges values. |
| boobtracker(1) | Manage bug tracking issues. |
| boog(1) | Binding and Optimizing On Gates. |
| boogie(1) | Compiler for the Boogie programming language. |
| book_components(1) ↣ sgbdemos(1) | Examples of the use of The Stanford GraphBase. |
| bookfinder(1sr) ↣ elvi(1sr) | Surfraw(1) search tools. |
| bookletimposer(1) | An utility to reorganize PDF pages. |
| bookman(1) | Generate a book from man pages. |
| boolcodes(3ncurses) ↣ terminfo_variables(3ncurses) | … |
| booldnf(1) | Converts a boolean expression to the DNF. |
| boolean(3pm) | Boolean support for Perl. |
| booleans(5) | The SELinux booleans configuration files. |
| booleans(8) | Policy booleans enable runtime customization of SELinux policy. |
| boolector(1) | SMT solver for bit-vectors and arrays. |
| boolfnames(3ncurses) ↣ terminfo_variables(3ncurses) | … |
| boolnames(3ncurses) ↣ terminfo_variables(3ncurses) | … |
| boolstuff(3) | Disjunctive Normal Form boolean expression C++ library. |
| boom(1) | BOOlean Minimization. |
| boomaga(1) | Post-processing backend for CUPS. |
| Boost::Geometry::Utils(3pm) | Bindings for the Boost Geometry library. |
| boot(7) | System bootup process based on UNIX System V Release 4. |
| boot(9freebsd) | Halt or reboot the system. |
| boot-info(8) | Diagnose the boot of your computer. |
| boot-repair(8) | Graphical tool to repair boot problems. |
| boot.h(3avr) | … |
| boot_is_spm_interrupt(3avr) ↣ avr_boot(3avr) | … |
| boot_lock_bits_set(3avr) ↣ avr_boot(3avr) | … |
| boot_lock_bits_set_safe(3avr) ↣ avr_boot(3avr) | … |
| boot_lock_fuse_bits_get(3avr) ↣ avr_boot(3avr) | … |
| boot_page_erase(3avr) ↣ avr_boot(3avr) | … |
| boot_page_erase_safe(3avr) ↣ avr_boot(3avr) | … |
| boot_page_fill(3avr) ↣ avr_boot(3avr) | … |
| boot_page_fill_safe(3avr) ↣ avr_boot(3avr) | … |
| boot_page_write(3avr) ↣ avr_boot(3avr) | … |
| boot_page_write_safe(3avr) ↣ avr_boot(3avr) | … |
| boot_rww_busy(3avr) ↣ avr_boot(3avr) | … |
| boot_rww_enable(3avr) ↣ avr_boot(3avr) | … |
| boot_rww_enable_safe(3avr) ↣ avr_boot(3avr) | … |
| boot_signature_byte_get(3avr) ↣ avr_boot(3avr) | … |
| boot_spm_busy(3avr) ↣ avr_boot(3avr) | … |
| boot_spm_busy_wait(3avr) ↣ avr_boot(3avr) | … |
| boot_spm_interrupt_disable(3avr) ↣ avr_boot(3avr) | … |
| boot_spm_interrupt_enable(3avr) ↣ avr_boot(3avr) | … |
| bootcd(1) | Utils to run diskless systems from cd. |
| bootcd2disk(1) | Copy a system running from bootcd to a disk. |
| bootcd2disk.conf(5) | Configuration file for bootcd2disk. |
| bootcdbackup(1) | Create a bootable offline backup of a unix system. |
| bootcdbackup.conf(5) | Configuration file for bootcdbackup. |
| bootcdflopcp(1) | Copy changes made after booting from bootcd to floppy. |
| bootcdwrite(1) | Build a bootcd image from a running system. |
| bootcdwrite.conf(5) | Configuration file for bootcdwrite. |
| bootchart.conf(5) | Boot performance analysis graphing tool configuration files. |
| bootchart.conf.d(5) ↣ bootchart.conf(5) | Boot performance analysis graphing tool configuration files. |
| bootctl(1) | Control the firmware and boot manager settings. |
| booth(8) ↣ boothd(8) | The Booth Cluster Ticket Manager. |
| booth-keygen(8) | Generate authentication key. |
| boothd(8) | The Booth Cluster Ticket Manager. |
| BOOTLOADER_SECTION(3avr) ↣ avr_boot(3avr) | … |
| bootmail(8) | Email a list of address a signed message of logs when this system (re)boots. |
| bootparam(7) | Introduction to boot time parameters of the Linux kernel. |
| bootparamd(8) | Boot parameter server. |
| bootparams(5) | Boot parameter database. |
| bootpc(8) | Bootp client. |
| bootpd(8) | Internet Boot Protocol server/gateway. |
| bootpef(8) | BOOTP Extension File compiler. |
| bootpgw(8) ↣ bootpd(8) | Internet Boot Protocol server/gateway. |
| bootptab(5) | Internet Bootstrap Protocol server database. |
| bootptest(8) | Send BOOTP queries and print responses. |
| bootstrap-vz(1) | Program is creating Debian images to be run in cloud environments like Amazons EC2, OpenStack,. |
| bootstrap-vz-remote(1) | Program is creating Debian images to be run in cloud environments like Amazons EC2,. |
| bootstrap-vz-server(1) ↣ bootstrap-vz-remote(1) | Program is creating Debian images to be run in cloud environments like Amazons EC2,. |
| boottime(9freebsd) | System time variables. |
| bootup(7) | System bootup process. |
| bopm(1) | Blitzed Open Proxy Monitor. |
| borda(1) | Command line interface to borda in mlpy (version 2.2.0). |
| Border(3I) | Visual separators. |
| border(3ncurses) | Create curses. |
| border_set(3ncurses) | … |
| borg(1) | Deduplicating and encrypting backup tool. |
| borg-benchmark(1) | Benchmark command. |
| borg-benchmark-crud(1) | Benchmark Create, Read, Update, Delete for archives. |
| borg-break-lock(1) | Break the repository lock (e.g. in case it was left by a dead borg. |
| borg-change-passphrase(1) | Change repository key file passphrase. |
| borg-check(1) | Check repository consistency. |
| borg-common(1) | Common options of Borg commands. |
| borg-compression(1) | Details regarding compression. |
| borg-config(1) | Get, set, and delete values in a repository or cache config file. |
| borg-create(1) | Create new archive. |
| borg-delete(1) | Delete an existing repository or archives. |
| borg-diff(1) | Diff contents of two archives. |
| borg-export-tar(1) | Export archive contents as a tarball. |
| borg-extract(1) | Extract archive contents. |
| borg-info(1) | Show archive details such as disk space used. |
| borg-init(1) | Initialize an empty repository. |
| borg-key(1) | Manage a keyfile or repokey of a repository. |
| borg-key-change-passphrase(1) | Change repository key file passphrase. |
| borg-key-export(1) | Export the repository key for backup. |
| borg-key-import(1) | Import the repository key from backup. |
| borg-key-migrate-to-repokey(1) | Migrate passphrase -> repokey. |
| borg-list(1) | List archive or repository contents. |
| borg-mount(1) | Mount archive or an entire repository as a FUSE filesystem. |
| borg-patterns(1) | Details regarding patterns. |
| borg-placeholders(1) | Details regarding placeholders. |
| borg-prune(1) | Prune repository archives according to specified rules. |
| borg-recreate(1) | Re-create archives. |
| borg-rename(1) | Rename an existing archive. |
| borg-serve(1) | Start in server mode. This command is usually not used manually. |
| borg-umount(1) | Un-mount the FUSE filesystem. |
| borg-upgrade(1) | Upgrade a repository from a previous version. |
| borg-with-lock(1) | Run a user specified command with the repository lock held. |
| borgbackup(1) ↣ borg(1) | Deduplicating and encrypting backup tool. |
| borgfs(1) | Mount archive or an entire repository as a FUSE filesystem. |
| bos(8) | Introduction to the bos command suite. |
| bos_addhost(8) | Adds a database server machine to the CellServDB file. |
| bos_addkey(8) | Adds a new server encryption key to the KeyFile file. |
| bos_adduser(8) | Adds a privileged user to the UserList file. |
| bos_apropos(8) | Displays each help entry containing a keyword string. |
| bos_create(8) | Defines a new process in the BosConfig file and starts it. |
| bos_delete(8) | Deletes a server process from the BosConfig file. |
| bos_exec(8) | Executes a command on a remote server machine. |
| bos_getdate(8) | Displays the time stamps on an AFS binary file. |
| bos_getlog(8) | Prints a server process's log file. |
| bos_getrestart(8) | Displays the automatic restart times for server processes. |
| bos_getrestricted(8) | Displays whether a bos server is restricted or not. |
| bos_help(8) | Displays help for bos commands. |
| bos_install(8) | Installs a new version of a binary file. |
| bos_listhosts(8) | Displays the contents of the CellServDB file. |
| bos_listkeys(8) | Displays the server encryption keys from the KeyFile file. |
| bos_listusers(8) | Lists the privileged users from the UserList file. |
| bos_prune(8) | Removes obsolete files from /usr/lib/openafs and /var/log/openafs. |
| bos_removehost(8) | Removes a database server machine from the CellServDB file. |
| bos_removekey(8) | Removes a server encryption key from the KeyFile file. |
| bos_removeuser(8) | Removes a privileged user from the UserList file. |
| bos_restart(8) | Restarts a server process. |
| bos_salvage(8) | Restores internal consistency to a file system or volume. |
| bos_setauth(8) | Sets authorization checking requirements for all server processes. |
| bos_setcellname(8) | Sets the cell's name in ThisCell and CellServDB. |
| bos_setrestart(8) | Sets when the BOS Server restarts processes. |
| bos_setrestricted(8) | Place a server in restricted mode. |
| bos_shutdown(8) | Stops a process without changing its status flag. |
| bos_start(8) | Starts a process after setting its status flag. |
| bos_startup(8) | Starts a process without changing its status flag. |
| bos_status(8) | Displays the status of server processes. |
| bos_stop(8) | Stops a process after changing its status flag. |
| bos_uninstall(8) | Reverts to the former version of a process's binary file. |
| bos_util(8) | Manipulate the AFS server Keyfile. |
| BosConfig(5) | Defines server processes for the BOS Server to monitor. |
| bosh(1) | Browsable Output SHell. |
| bosixnet_daemon(1) | Shell script which periodically sends information about current IPv6 address to remote. |
| bosixnet_webui(1) | FastCGI program which passively listens for incoming connections and generates list of hosts. |
| BosLog(5) | Traces BOS Server operations. |
| bossa(1) | GUI programmer for Atmel SAM ARM microcontrollers. |
| bossac(1) | Command line programmer for Atmel SAM ARM microcontrollers. |
| bossash(1) | Interactive shell programmer for Atmel SAM ARM microcontrollers. |
| bosserver(8) | Initializes the BOS Server. |
| boswars(6) | Futuristic real-time strategy game. |
| bot-basicbot-pluggable(1p) | A standard Bot::BasicBot::Pluggable script. |
| bot-training(1p) | Command-line interface Bot::Training. |
| Bot::BasicBot(3pm) | Simple irc bot baseclass. |
| Bot::BasicBot::Pluggable(3pm) | Extended simple IRC bot for pluggable modules. |
| Bot::BasicBot::Pluggable::Module(3pm) | Base module for all BasicBot plugins. |
| Bot::BasicBot::Pluggable::Module::Auth(3pm) | Authentication for Bot::BasicBot::Pluggable modules. |
| Bot::BasicBot::Pluggable::Module::ChanOp(3pm) | Channel operator. |
| Bot::BasicBot::Pluggable::Module::DNS(3pm) | DNS lookups for hostnames or IP addresses. |
| Bot::BasicBot::Pluggable::Module::Google(3pm) | Searches Google for terms and spellings. |
| Bot::BasicBot::Pluggable::Module::Infobot(3pm) | Infobot clone redone in B::B::P. |
| Bot::BasicBot::Pluggable::Module::Join(3pm) | Join and leave channels; remembers state. |
| Bot::BasicBot::Pluggable::Module::Karma(3pm) | Tracks karma for various concepts. |
| Bot::BasicBot::Pluggable::Module::Loader(3pm) | Loads and unloads bot modules; remembers state. |
| Bot::BasicBot::Pluggable::Module::Seen(3pm) | Track when and where people were seen. |
| Bot::BasicBot::Pluggable::Module::Title(3pm) | Speaks the title of URLs mentioned. |
| Bot::BasicBot::Pluggable::Module::Vars(3pm) | Change internal module variables. |
| Bot::BasicBot::Pluggable::Store(3pm) | Base class for the back-end pluggable store. |
| Bot::BasicBot::Pluggable::Store::DBI(3pm) | Use DBI to provide a storage backend. |
| Bot::BasicBot::Pluggable::Store::Deep(3pm) | Use DBM::Deep to provide a storage backend. |
| Bot::BasicBot::Pluggable::Store::Memory(3pm) | Use memory (RAM) to provide a storage backend. |
| Bot::BasicBot::Pluggable::Store::Storable(3pm) | Use Storable to provide a storage backend. |
| Bot::BasicBot::Pluggable::Terminal(3pm) | A standard Bot::BasicBot::Pluggable script. |
| Bot::Training(3pm) | Plain text training material for bots like Hailo and AI::MegaHAL. |
| botan(1) | Botan command line util. |
| botan-config-1.10(1) | Botan Configuration Query program. |
| botch(1) | Bootstrap/build order tool chain. |
| botch-add-arch(1) | Add architecture to source packages. |
| botch-annotate-strong(1) | Add strong dependency information to a dependency graph. |
| botch-apply-ma-diff(1) | Applies a multiarch diff as created by botch-ma-diff. |
| botch-bin2src(1) | Convert binary packages to their source packages. |
| botch-build-fixpoint(1) | Find build order until dependency cycles occur. |
| botch-build-order-from-zero(1) | Find a build order for a non-existing architecture. |
| botch-buildcheck-more-problems(1) | A tool like dose-builddebcheck but return more than the first reason. |
| botch-buildgraph2packages(1) | Convert buildgraph to packages. |
| botch-buildgraph2srcgraph(1) | Converts a buildgraph into a srcgraph. |
| botch-calcportsmetric(1) | Calculate source package importance. |
| botch-calculate-fas(1) | Calculate a feedback arc set. |
| botch-check-ma-same-versions(1) | Check if Multi-Arch:same versions are in sync. |
| botch-checkfas(1) | Check which edges in the fas are not droppable. |
| botch-clean-repository(1) | Clean errors in a repository by removing transitively uninstallable or compilable. |
| botch-collapse-srcgraph(1) | Make a srcgraph acyclic by collapsing its strongly connected components. |
| botch-convert-arch(1) | Convert the architecture of a Packages file. |
| botch-create-graph(1) | Create graph based on installation sets, strong dependency sets or dependency closures. |
| botch-cross(1) | Execute botch tools in the cross phase. |
| botch-distcheck-more-problems(1) | A tool like dose-distcheck but return more than the first reason. |
| botch-dose2html(1) | Turn the yaml output by dose-builddebcheck into html. |
| botch-download-pkgsrc(1) | Download Packages and Sources. |
| botch-droppable-diff(1) | Difference between two *.droppable files. |
| botch-droppable-union(1) | Union of two *.droppable files. |
| botch-extract-scc(1) | Extract all strongly connected components. |
| botch-fasofstats(1) | Extract feedback arc set from output of botch-print-stats. |
| botch-filter-src-builds-for(1) | Filter a Sources file for the packages building for a certain architecture. |
| botch-find-fvs(1) | Calculate a feedback vertex set. |
| botch-fix-cross-problems(1) | Fix Packages files with the output of botch-cross-problems. |
| botch-graph-ancestors(1) | Find all ancestors of a vertex in a graph in GraphML or dot format. |
| botch-graph-descendants(1) | Find all descendants of a vertex in a graph in GraphML or dot format. |
| botch-graph-difference(1) | Graph diff. |
| botch-graph-info(1) | Show info about a buildgraph or sourcegraph. |
| botch-graph-neighborhood(1) | Extract the neighborhood around a vertex. |
| botch-graph-shortest-path(1) | Find the shortest path(s) between two vertices of a graph in GraphML or dot format. |
| botch-graph-sinks(1) | Find all sinks (vertices without successors) in a graph in GraphML or dot format. |
| botch-graph-sources(1) | Find all sources (vertices without predecessors) in a graph in GraphML or dot format. |
| botch-graph-tred(1) | Find the transitive reduction of a graph in GraphML or dot format. |
| botch-graph2text(1) | For each vertex in a graph print a formatted line on standard output. |
| botch-graphml2dot(1) | Converts graphml to dot. |
| botch-latest-version(1) | Only keep the latest version. |
| botch-ma-diff(1) | Diff two packages files for differences in their multiarch values. |
| botch-multiarch-interpreter-problem(1) | Find all arch:all packages that allow switching architectures. |
| botch-native(1) | Execute botch tools in the native phase. |
| botch-optuniv(1) | Self contained repository with minimal number of source packages. |
| botch-packages-diff(1) | Create a diff between two Packages or Sources files. |
| botch-packages-difference(1) | Calculate the asymmetric set difference. |
| botch-packages-intersection(1) | Calculate the set intersection. |
| botch-packages-union(1) | Calculate the set union. |
| botch-partial-order(1) | Calculate the partial vertex order. |
| botch-print-stats(1) | Find cycles, selfcycles, amount of cycles through edges, feedback arc and vertex set,. |
| botch-profile-build-fvs(1) | Remove droppable dependencies from graph. |
| botch-remove-virtual-disjunctions(1) | Remove virtual dependency disjunctions. |
| botch-src2bin(1) | Turn source packages into their binary packages. |
| botch-stat-html(1) | Turn the JSON output of botch-print-stats into human readable HTML. |
| botch-transition(1) | Calculate a transition order. |
| botch-wanna-build-sortblockers(1) | Importance of source packages for ports. |
| botch-y-u-b-d-transitive-essential(1) | Find out why source packages are B-D transitive essential. |
| botch-y-u-no-bootstrap(1) | Find out why Debian cannot be bootstrapped. |
| botti(1) | Run an irssi module, such as a bot, without a UI. |
| bottle(1) | Command line interface. |
| bottom_panel(3curses) ↣ panel(3curses) | Panel stack extension for curses. |
| bouboule(6x) | Draws spinning 3D blobs. |
| Boulder(3pm) | An API for hierarchical tag/value structures. |
| Boulder::Blast(3pm) | Parse and read BLAST files. |
| Boulder::Blast::NCBI(3pm) | Parse and read NCBI BLAST files. |
| Boulder::Blast::WU(3pm) | Parse and read WU-BLAST files. |
| Boulder::Genbank(3pm) | Fetch Genbank data records as parsed Boulder Stones. |
| Boulder::LocusLink(3pm) | Fetch LocusLink data records as parsed Boulder Stones. |
| Boulder::Medline(3pm) | Fetch Medline data records as parsed Boulder Stones. |
| Boulder::Omim(3pm) | Fetch Omim data records as parsed Boulder Stones. |
| Boulder::Store(3pm) | Simple persistent storage for Stone tag/value objects. |
| Boulder::Stream(3pm) | Read and write tag/value data from an input stream. |
| Boulder::String(3pm) | Read and write tag/value data from a string. |
| Boulder::Swissprot(3pm) | Fetch SwissProt data records as parsed Boulder Stones. |
| Boulder::Unigene(3pm) | Fetch Unigene data records as parsed Boulder Stones. |
| Boulder::XML(3pm) | XML format input/output for Boulder streams. |
| bounce(5) | Postfix bounce message template format. |
| bounce(8postfix) | Postfix delivery status reports. |
| bounced(8) | Mailing List Bounce Processing Daemon for Sympa. |
| bouncesaying(1) | Perhaps bounce each incoming message. |
| bouncingcow(6x) | A happy cow on a trampoline in 3D. Moo. |
| bouncy(6) | Game for kids. |
| boundaryFoam(1) | Is the part of OpenFOAM - a free, open source CFD software. |
| bovo(6) | KDE Five in a Row Board Game. |
| box(3ncurses) ↣ border(3ncurses) | Create curses. |
| Box2_6(3I) | Tile interactors in a box. |
| box_set(3ncurses) ↣ border_set(3ncurses) | … |
| boxed(6x) | Draws a box full of 3D bouncing balls that explode. |
| boxer(1p) | Boxer command line utils. |
| Boxer(3pm) | System deployment ninja tricks. |
| Boxer::CLI(3pm) | Boxer command line utils. |
| Boxer::CLI::Command(3pm) | … |
| Boxer::CLI::Command::About(3pm) | … |
| Boxer::CLI::Command::Aliases(3pm) | … |
| Boxer::CLI::Command::Commands(3pm) | … |
| Boxer::CLI::Command::Compose(3pm) | … |
| Boxer::File::WithSkeleton(3pm) | … |
| Boxer::Part(3pm) | Software component. |
| Boxer::Part::Reclass(3pm) | Software component as a reclass node or class. |
| Boxer::Role::Interact(3pm) | … |
| Boxer::Task(3pm) | … |
| Boxer::Task::Classify(3pm) | … |
| Boxer::Task::Serialize(3pm) | … |
| Boxer::Types(3pm) | … |
| Boxer::World(3pm) | Set of software available to install. |
| Boxer::World::Flat(3pm) | Software for single use case. |
| Boxer::World::Reclass(3pm) | Software as serialized by reclass. |
| boxes(1) | Text mode box and comment drawing filter. |
| boxfit(6x) | Fills space with a gradient of growing boxes or circles. |
| boxshade(1) | Pretty-printing of multiple sequence alignments. |
| boxTurb(1) | Is the part of OpenFOAM - a free, open source CFD software. |
| boxWindow(3) ↣ cdk_draw(3) | Cdk Drawing Functions. |
| bp(3) | Bundle Protocol communications library. |
| bp(9freebsd) | Kernel buffer I/O scheme used in FreeBSD VM system. |
| bp_aacomp(1p) | Amino acid composition of protein sequences. |
| bp_biofetch_genbank_proxy(1p) | Caching BioFetch-compatible web proxy for GenBank. |
| bp_bioflat_index(1p) | Index sequence files using Bio::DB::Flat. |
| bp_biogetseq(1p) | Sequence retrieval using OBDA registry. |
| bp_bioperl_application_installer.pl(1p) | Downloads and installs runnables. |
| bp_blast2tree(1p) | Builds a phylogenetic tree based on a sequence search (FastA,BLAST,HMMER). |
| bp_bulk_load_gff(1p) | Bulk-load a Bio::DB::GFF database from GFF files. |
| bp_chaos_plot(1p) | A chaos plot from DNA and RNA sequences. |
| bp_classify_hits_kingdom(1p) | Classify BLAST hits by taxonomic kingdom. |
| bp_composite_LD(1p) | … |
| bp_dbsplit(1p) | Script to split an input set of database(s) into smaller pieces. |
| bp_download_query_genbank(1p) | Script to query Genbank and retrieve records. |
| bp_einfo(1p) | Query einfo to find all available databases or information about a specific database (field. |
| bp_extract_feature_seq(1p) | Extract the corresponding sequence for a specified feature type. |
| bp_fast_load_gff(1p) | Fast-load a Bio::DB::GFF database from GFF files. |
| bp_fastam9_to_table(1p) | Turn FASTA -m 9 output into NCBI -m 9 tabular output. |
| bp_fetch(1p) | Fetches sequences from bioperl indexed databases. |
| bp_filter_search(1p) | Filters searchio results, outputting a tab delimited summary. |
| bp_find-blast-matches(1p) | Extract DNA sequences based on BLAST hits. |
| bp_flanks(1p) | Finding flanking sequences for a variant in a sequence position. |
| bp_gccalc(1p) | GC content of nucleotide sequences. |
| bp_genbank2gff(1p) | Load a Bio::DB::GFF database from GENBANK files. |
| bp_genbank2gff3(1p) | … |
| bp_genbank_ref_extractor(1p) | Retrieves all related sequences for a list of searches on Entrez gene. |
| bp_generate_histogram(1p) | … |
| bp_heterogeneity_test(1p) | A test for distinguishing between selection and population expansion. |
| bp_hivq(1p) | An interactive command-line interface to Bio::DB::HIV and Bio::DB::Query::HIVQuery. |
| bp_hmmer_to_table(1p) | Turn HMMER output into tabular format. |
| bp_index(1p) | Indexes files for use by bp_fetch.pl. |
| bp_load_gff(1p) | Load a Bio::DB::GFF database from GFF files. |
| bp_local_taxonomydb_query(1p) | Query a local TaxonomyDB for species or taxonid. |
| bp_make_mrna_protein(1p) | Convert an input mRNA/cDNA sequence into protein. |
| bp_mask_by_search(1p) | Mask sequence(s) based on its alignment results. |
| bp_meta_gff(1p) | Get/set Bio::DB::GFF meta-data. |
| bp_mrtrans(1p) | Implement a transformer of alignments from protein to mrna coordinates. |
| bp_multi_hmmsearch.pl(1p) | Perform a hmmsearch into multiple FASTA files using. |
| bp_mutate(1p) | Randomly mutagenize a single protein or DNA sequence. |
| bp_netinstall(1p) | Net-based installer of BioPerl. |
| bp_nexus2nh(1p) | Convert nexus format trees (from PAUP* and MrBayes) to new hampshire. |
| bp_nrdb(1p) | A script to emulate Warren Gish's nrdb, make a unique sequence database from a set of input. |
| bp_oligo_count(1p) | Oligo count and frequency. |
| bp_panalysis.pl(1p) | An example/tutorial script how to access analysis tools. |
| bp_papplmaker.pl(1p) | Analysis tools module generator. |
| bp_parse_hmmsearch(1p) | Parse single/multiple HMMSEARCH results file(s) with. |
| bp_process_gadfly(1p) | Massage Gadfly/FlyBase GFF files into a version suitable for the Generic Genome Browser. |
| bp_process_sgd(1p) | Massage SGD annotation flat files into a version suitable for the Generic Genome Browser. |
| bp_process_wormbase(1p) | Massage WormBase GFF files into a version suitable for the Generic Genome Browser. |
| bp_query_entrez_taxa(1p) | Query Entrez taxonomy database and print out information. |
| bp_remote_blast(1p) | Script for submitting jobs to a remote blast server (ncbi blast queue at this time). |
| bp_revtrans-motif(1p) | Reverse translate a Profam-like protein motif. |
| bp_run_neighbor.pl(1p) | Run Phylip's 'neighbor' program through Bioperl. |
| bp_run_protdist.pl(1p) | Run Phylip's 'protdist' program through Bioperl. |
| bp_search2alnblocks(1p) | Turn SearchIO parseable reports(s) into a set of aligned blocks. |
| bp_search2gff(1p) | Turn a SearchIO report into GFF. |
| bp_search2table(1p) | Turn SearchIO parseable reports into tab delimited format like NCBI's -m 9. |
| bp_search2tribe(1p) | Turn SearchIO parseable reports(s) into TRIBE matrix. |
| bp_seq_length(1p) | Lists the number of bases and number of sequences in specified sequence database files. |
| bp_seqconvert(1p) | Generic BioPerl sequence format converter. |
| bp_seqcut(1p) | Cut FASTA sequences with a given range. |
| bp_seqfeature_load(1p) | Load GFF into a SeqFeature database. |
| bp_seqpart(1p) | Takes one or more sequence files and splits them into a number of load balanced files. |
| bp_seqret(1p) | Bioperl implementation of sequence fetch from local db (like EMBOSS seqret). |
| bp_seqretsplit(1p) | Split a sequence (or stream) into a single file per sequence. |
| bp_split_seq(1p) | Splits a sequence into equal sized chunks with an optional. |
| bp_sreformat(1p) | Convert sequence formats. |
| bp_taxid4species(1p) | Simple script which returns the NCBI Taxonomic id for a requested species. |
| bp_taxonomy2tree(1p) | Building a taxonomic tree based on the full lineages of a set of species names. |
| bp_translate_seq(1p) | Translates a sequence. |
| bp_tree2pag(1p) | Convert Bio::TreeIO parseable format trees to pagel format. |
| bp_unflatten_seq(1p) | Unflatten a genbank or genbank-style feature file into a nested SeqFeature hierarchy. |
| bpadmin(1) | ION Bundle Protocol (BP) administration interface. |
| bpcancel(1) | Bundle Protocol (BP) bundle cancellation utility. |
| bpchat(1) | Bundle Protocol chat test program. |
| bpclock(1) | Bundle Protocol (BP) daemon task for managing scheduled events. |
| bpcounter(1) | Bundle Protocol reception test program. |
| bpcp(1) | A remote copy utility for delay tolerant networks utilizing NASA JPL's Interplanetary Overlay Network. |
| bpcpd(1) | ION Delay Tolerant Networking remote file copy daemon. |
| bpdriver(1) | Bundle Protocol transmission test program. |
| bpecho(1) | Bundle Protocol reception test program. |
| bpextensions(3) | Interface for adding extensions to Bundle Protocol. |
| bpf(2) | Perform a command on an extended BPF map or program. |
| bpf(4freebsd) | Berkeley Packet Filter. |
| bpf(9freebsd) | Berkeley Packet Filter. |
| bpf_filter(9freebsd) | Berkeley Packet Filter. |
| bpf_mtap(9freebsd) | Berkeley Packet Filter. |
| bpf_mtap2(9freebsd) | Berkeley Packet Filter. |
| bpf_tap(9freebsd) | Berkeley Packet Filter. |
| bpf_validate(9freebsd) | Berkeley Packet Filter. |
| bpfattach(9freebsd) | Berkeley Packet Filter. |
| bpfattach2(9freebsd) | Berkeley Packet Filter. |
| bpfc(8) | A Berkeley Packet Filter assembler and compiler. |
| bpfdetach(9freebsd) | Berkeley Packet Filter. |
| bpflist-bpfcc(8) | Display processes currently using BPF programs and maps. |
| bpftool(8) | Tool for inspection and simple manipulation of eBPF programs and maps. |
| bpftool-map(8) | Tool for inspection and simple manipulation of eBPF maps. |
| bpftool-prog(8) | Tool for inspection and simple manipulation of eBPF progs. |
| bping(1) | Send and receive Bundle Protocol echo bundles. |
| bplay(1) | Buffered sound recording/playing. |
| bplist(1) | Bundle Protocol (BP) utility for listing queued bundles. |
| bpm(1) | Calculate the tempo of music files. |
| bpm-graph(1) ↣ bpm(1) | Calculate the tempo of music files. |
| bpm-tag(1) ↣ bpm(1) | Calculate the tempo of music files. |
| bppalnoptim(1) | Sequence alignment optimization according to the number of sequences vs. number of sites trade-. |
| bppalnscore(1) | Bio++ alignment scoring. |
| bppancestor(1) | Ancestral sequence reconstruction with Bio++. |
| bppconsense(1) | Tree consensus analysis with Bio++. |
| bppdist(1) | Distance methods for phylogenetic reconstruction with Bio++. |
| bppmixedlikelihoods(1) | Computation of site per site likelihoods of components of mixture models. |
| bppml(1) | Maximum likelihood phylogenetic analysis with Bio++. |
| bpppars(1) | Parsimony phylogenetic analysis with Bio++. |
| bppphysamp(1) | Phylogenetic Sampling. |
| bpppopstats(1) | Population genetics with Bio++. |
| bppreroot(1) | Sequential rerooting of trees with Bio++. |
| bppseqgen(1) | Sequence simulation with Bio++. |
| bppseqman(1) | Bio++ sequence manipulation and in silico molecular biology with Bio++. |
| bpptreedraw(1) | Phylogenetic tree drawing with Bio++. |
| bpqparms(8) | Configure BPQ ethernet devices. |
| bprc(5) | Bundle Protocol management commands file. |
| bprecvfile(1) | Bundle Protocol (BP) file reception utility. |
| bps-bpfcc(8) | List all BPF programs. 'ps' for BPF programs. |
| bpsendfile(1) | Bundle Protocol (BP) file transmission utility. |
| bpsink(1) | Bundle Protocol reception test program. |
| bpsource(1) | Bundle Protocol transmission test shell. |
| bpstats(1) | Bundle Protocol (BP) processing statistics query utility. |
| bpstats2(1) | Bundle Protocol (BP) processing statistics query utility via bundles. |
| bptrace(1) | Bundle Protocol (BP) network trace utility. |
| bput(1) ↣ axgetput(1) | Upload or download files via AX.25 / axspawn Linux login session. |
| bputa(1) | BP-based CFDP UT-layer adapter. |
| bpython(1) | A fancy {curtsies, curses, urwid} interface to the Python interactive interpreter. |
| bpython-config(5) | User configuration file for bpython. |
| bpython-curses(1) ↣ bpython(1) | A fancy {curtsies, curses, urwid} interface to the Python interactive interpreter. |
| bpython-urwid(1) ↣ bpython(1) | A fancy {curtsies, curses, urwid} interface to the Python interactive interpreter. |
| bpython3(1) | A fancy {curtsies, curses, urwid} interface to the Python interactive interpreter. |
| bpython3-config(5) | User configuration file for bpython. |
| bpython3-curses(1) ↣ bpython3(1) | A fancy {curtsies, curses, urwid} interface to the Python interactive interpreter. |
| bpython3-urwid(1) ↣ bpython3(1) | A fancy {curtsies, curses, urwid} interface to the Python interactive interpreter. |
| br(1) | Utility to interact with Firecracker device. |
| br2684ctl(8) | RFC1483/2684 Bridge Daemon. |
| br_biofetch(1) | Biofetch client. |
| br_bioflat(1) | OBDA flat file indexer. |
| br_biogetseq(1) | ODBA Sequence Retrieval. |
| br_pmfetch(1) | PubMed Client. |
| braa(1) | Mass SNMP scanner. |
| brag(1) | Grab multipart binaries from news server. |
| braid(6x) | Draws random color-cycling braids around a circle. |
| braillegraph(1) | A simple histogram tool that produces text output. |
| brailleutils(1) | Convert and emboss PEF documents. |
| brainparty(6) | 36 puzzle games for all the family. |
| branch(1rheolef) | … |
| branch(2rheolef) | A parameter-dependent sequence of field. |
| brancid(1) ↣ rancid(1) | Cisco configuration filter. |
| brandelf(1) | Mark an ELF binary for a specific ABI. |
| brandy(1) | A portable BBC BASIC V interpreter. |
| brasero(1) | Simple and easy to use CD/DVD burning application for the Gnome Desktop. |
| brctl(8) | Ethernet bridge administration. |
| Bread::Board(3pm) | A solderless way to wire up your application components. |
| Bread::Board::BlockInjection(3pm) | … |
| Bread::Board::ConstructorInjection(3pm) | … |
| Bread::Board::Container(3pm) | … |
| Bread::Board::Container::FromParameterized(3pm) | … |
| Bread::Board::Container::Parameterized(3pm) | A parameterized container. |
| Bread::Board::Dependency(3pm) | … |
| Bread::Board::Dumper(3pm) | … |
| Bread::Board::LifeCycle(3pm) | … |
| Bread::Board::LifeCycle::Singleton(3pm) | … |
| Bread::Board::LifeCycle::Singleton::WithParameters(3pm) | … |
| Bread::Board::Literal(3pm) | … |
| Bread::Board::Manual(3pm) | A manual for Bread::Board. |
| Bread::Board::Manual::Concepts(3pm) | An overview of the concepts in Bread::Board. |
| Bread::Board::Manual::Concepts::Advanced(3pm) | An overview of some of the more advanced Bread::Board concepts. |
| Bread::Board::Manual::Concepts::Typemap(3pm) | An overview of the typemapping feature. |
| Bread::Board::Manual::Example(3pm) | A set of examples of Bread::Board usage. |
| Bread::Board::Manual::Example::FormSensible(3pm) | A Form::Sensible and Catalyst example. |
| Bread::Board::Manual::Example::LogDispatch(3pm) | An example of composing a dynamic Log::Dispatch object. |
| Bread::Board::Service(3pm) | … |
| Bread::Board::Service::Alias(3pm) | … |
| Bread::Board::Service::Deferred(3pm) | … |
| Bread::Board::Service::Deferred::Thunk(3pm) | … |
| Bread::Board::Service::Inferred(3pm) | … |
| Bread::Board::Service::WithClass(3pm) | … |
| Bread::Board::Service::WithDependencies(3pm) | … |
| Bread::Board::Service::WithParameters(3pm) | … |
| Bread::Board::SetterInjection(3pm) | … |
| Bread::Board::Traversable(3pm) | … |
| Bread::Board::Types(3pm) | … |
| breadability(1) | Readbility formatter for HTML. |
| break(1posix) | Exit from for, while, or until loop. |
| break(2) ↣ unimplemented(2) | … |
| break(3tcl) | Abort looping command. |
| break_filelist(1) ↣ sloccount(1) | Count source lines of code (SLOC). |
| brebis(1) | Check your backup for corruption or unexpected content. |
| brec(1) ↣ bplay(1) | Buffered sound recording/playing. |
| bref(1) | Tool for compressing diploid reference VCF files for the Beagle program. |
| bregex(8) | Bacula's 'regex' engine. |
| brewtarget(1) | Helps you brew beer. |
| brfs(1) | Inline fs.readFileSync call. |
| bridge(4freebsd) | Network bridge device. |
| bridge(8) | Show / manipulate bridge addresses and devices. |
| bridge-utils-interfaces(5) | Bridge-utils extensions for the interfaces(5) file format. |
| brightd(1) | A brightness control daemon. |
| brightnessctl(1) | Read and control device brightness. |
| brighton(1) ↣ bristol(1) | A synthesiser emulation package. |
| briquolo(6) | Fast paced 3d breakout game. |
| bristol(1) | A synthesiser emulation package. |
| bristolengine(1) ↣ bristol(1) | A synthesiser emulation package. |
| bristoljackstats(1) | Ancillary program for bristol. |
| british-english(5) | A list of English words. |
| british-english-huge(5) | A list of English words. |
| british-english-insane(5) | A list of English words. |
| british-english-large(5) | A list of English words. |
| british-english-small(5) | A list of English words. |
| brk(2) | Change data segment size. |
| brk(2freebsd) | Change data segment size. |
| brlapi__acceptAllKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi__acceptKeyRanges(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi__acceptKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi__closeConnection(3) ↣ brlapi_connection(3) | … |
| brlapi__defaultExceptionHandler(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi__enterRawMode(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi__enterTtyMode(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi__enterTtyModeWithPath(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi__exceptionHandler_t(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi__getDisplaySize(3) ↣ brlapi_info(3) | How to get information about the connected Terminal. |
| brlapi__getDriverName(3) ↣ brlapi_info(3) | How to get information about the connected Terminal. |
| brlapi__ignoreAllKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi__ignoreKeyRanges(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi__ignoreKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi__leaveRawMode(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi__leaveTtyMode(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi__openConnection(3) ↣ brlapi_connection(3) | … |
| brlapi__readKey(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi__recvRaw(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi__resumeDriver(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi__sendRaw(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi__setExceptionHandler(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi__setFocus(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi__strexception(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi__suspendDriver(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi__write(3) ↣ brlapi_write(3) | Write text to the braille display. |
| brlapi__writeDots(3) ↣ brlapi_write(3) | Write text to the braille display. |
| brlapi__writeText(3) ↣ brlapi_write(3) | Write text to the braille display. |
| brlapi__writeWText(3) ↣ brlapi_write(3) | Write text to the braille display. |
| brlapi_acceptAllKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_acceptKeyRanges(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_acceptKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_authClientPacket_t(3) | … |
| brlapi_authServerPacket_t(3) | … |
| brlapi_closeConnection(3) ↣ brlapi_connection(3) | … |
| brlapi_connection(3) | … |
| brlapi_connectionSettings_t(3) | Settings structure for BrlAPI connection. |
| brlapi_constants.h(3) | … |
| brlapi_defaultExceptionHandler(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_deprecated(3) | … |
| brlapi_describedKeyCode_t(3) | … |
| brlapi_describeKeyCode(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi_enterRawMode(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi_enterTtyMode(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi_enterTtyModeWithPath(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi_errfun(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_errlist(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_errno(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_error(3) | How to handle errors. |
| brlapi_error_location(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_error_t(3) | … |
| brlapi_errorPacket_t(3) | … |
| brlapi_exceptionHandler_t(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_expandedKeyCode_t(3) | … |
| brlapi_expandKeyCode(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_fd_mutex(3) ↣ brlapi_protocol(3) | Instructions and constants for BrlAPI 's protocol. |
| brlapi_fileDescriptor(3) ↣ brlapi_connection(3) | … |
| brlapi_gaierrno(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_getDisplaySize(3) ↣ brlapi_info(3) | How to get information about the connected Terminal. |
| brlapi_getDriverName(3) ↣ brlapi_info(3) | How to get information about the connected Terminal. |
| brlapi_getDriverSpecificModePacket_t(3) | … |
| brlapi_getHandleSize(3) ↣ brlapi_handles(3) | … |
| brlapi_getPacketTypeName(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_getRaw(3) ↣ brlapi_deprecated(3) | … |
| brlapi_getTty(3) ↣ brlapi_deprecated(3) | … |
| brlapi_getTtyPath(3) ↣ brlapi_deprecated(3) | … |
| brlapi_handle_t(3) ↣ brlapi_handles(3) | … |
| brlapi_handles(3) | … |
| brlapi_header_t(3) | … |
| brlapi_ignoreAllKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_ignoreKeyRanges(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_ignoreKeys(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_info(3) | How to get information about the connected Terminal. |
| brlapi_initializeConnection(3) ↣ brlapi_deprecated(3) | … |
| brlapi_keyCode_t(3) ↣ brlapi_keycodes(3) | … |
| brlapi_keycodes(3) | … |
| brlapi_keycodes.h(3) | … |
| brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_leaveRaw(3) ↣ brlapi_deprecated(3) | … |
| brlapi_leaveRawMode(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi_leaveTty(3) ↣ brlapi_deprecated(3) | … |
| brlapi_leaveTtyMode(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi_libcerrno(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_nerr(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_openConnection(3) ↣ brlapi_connection(3) | … |
| brlapi_packet_t(3) | … |
| brlapi_packetType_t(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_perror(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_protocol(3) | Instructions and constants for BrlAPI 's protocol. |
| brlapi_protocol.h(3) | Types and constants for BrlAPI's protocol. |
| brlapi_range_t(3) | … |
| brlapi_rangeType_all(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_rangeType_code(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_rangeType_command(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_rangeType_key(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_rangeType_t(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_rangeType_type(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_readKey(3) ↣ brlapi_keys(3) | How to read key presses from the braille terminal. |
| brlapi_readPacket(3) ↣ brlapi_protocol(3) | Instructions and constants for BrlAPI 's protocol. |
| brlapi_readPacketContent(3) ↣ brlapi_protocol(3) | Instructions and constants for BrlAPI 's protocol. |
| brlapi_readPacketHeader(3) ↣ brlapi_protocol(3) | Instructions and constants for BrlAPI 's protocol. |
| brlapi_recvRaw(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi_resume(3) ↣ brlapi_deprecated(3) | … |
| brlapi_resumeDriver(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi_sendRaw(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi_setExceptionHandler(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_setFocus(3) ↣ brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi_settings_t(3) ↣ brlapi_deprecated(3) | … |
| brlapi_strerror(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_strexception(3) ↣ brlapi_error(3) | How to handle errors. |
| brlapi_suspend(3) ↣ brlapi_deprecated(3) | … |
| brlapi_suspendDriver(3) ↣ brlapi_driverspecific(3) | Raw and Suspend Modes mechanism. |
| brlapi_tty(3) | How to take control of ttys for direct braille display / read. |
| brlapi_unignoreKeyRange(3) ↣ brlapi_deprecated(3) | … |
| brlapi_unignoreKeySet(3) ↣ brlapi_deprecated(3) | … |
| brlapi_version(3) | … |
| brlapi_versionPacket_t(3) | … |
| brlapi_write(3) | Write text to the braille display. |
| brlapi_writeArguments_t(3) | … |
| brlapi_writeArgumentsPacket_t(3) | … |
| brlapi_writeDots(3) ↣ brlapi_write(3) | Write text to the braille display. |
| brlapi_writePacket(3) ↣ brlapi_protocol(3) | Instructions and constants for BrlAPI 's protocol. |
| brlapi_writeStruct(3) | … |
| brlapi_writeText(3) ↣ brlapi_write(3) | Write text to the braille display. |
| brlapi_writeWText(3) ↣ brlapi_write(3) | Write text to the braille display. |
| brltty(1) | Refreshable braille display driver for Linux/Unix. |
| bro(8) | Passive network traffic analyzer. |
| bro-cut(1) | Parse bro logs. |
| bro-pkg(1) | Bro Package Manager. |
| broadcast_dialog_message(3alleg4) | Broadcasts a message to all the objects in the active dialog. Allegro game program‐. |
| broadwayd(1) | Broadway display server. |
| broctl(8) | Interactive shell for managing Bro installations. |
| brooktree(4freebsd) | Brooktree Bt848/849/878/879 and Pinnacle PCTV video capture driver. |
| brot(6) ↣ spruch(6) | Print a random German adage. |
| brotli(1) | Brotli, unbrotli - compress or decompress files. |
| browser-pack(1) | Pack Node.js source file information for browserify uses. |
| browser-unpack(1) | Parse a bundle generated by browser-pack. |
| Browser::Open(3pm) | Open a browser in a given URL. |
| browserify-lite(1) | Bundle client-side JavaScript using Node.js-style module syntax. |
| BRP_PACU(1) | Dual fft live audio analysis program. |
| brsccla(1) | BRSC-based BP convergence layer adapter (input and output) task. |
| brsscla(1) | BRSS-based BP convergence layer adapter (input and output) task. |
| BrushCmd(3U) | Command for setting components' brush attribute. |
| brushtopbm(1) | Convert a doodle brush file into a portable bitmap. |
| brutalchess(6) | 3d chess game. |
| brutefir(1) | Program included in the DeMuDi distribution. |
| bruteforce-luks(1) | Try to find the password of a LUKS volume. |
| bruteforce-salted-openssl(1) | Try to find the passphrase for files encrypted with OpenSSL. |
| brutespray(8) | Python bruteforce tool. |
| brz(1) | Breezy next-generation distributed version control. |
| bs11_config(1) | Configuration of BS-11 BTS via RS232. |
| bs1770gain(1) | Lundness scanner and normalizer based on ITU-R BS.1770. |
| bscan(8) | Bacula's 'Scan tape'. |
| bsd-csh(1) | A shell (command interpreter) with C-like syntax. |
| bsd-from(1) | Print names of those who have sent mail. |
| bsd-mailx(1) | Send and receive mail. |
| bsd-write(1) | Send a message to another user. |
| BSD::arc4random(3pm) | Perl interface to the arc4 random number generator. |
| BSD::Resource(3pm) | BSD process resource limit and priority functions. |
| bsd_signal(3) | Signal handling with BSD semantics. |
| bsdcat(1) | Expand files to standard output. |
| bsdcpio(1) | Copy files to and from archives. |
| bsdgames-adventure(6) | An exploration game. |
| bsdiff(1) | Generate a patch between two binary files. |
| bsdl2jtag(1) | UrJTAG declaration file conversion. |
| bsdtar(1) | Manipulate tape archives. |
| bsearch(3) | Binary search of a sorted array. |
| bsearch(3avr) ↣ avr_stdlib(3avr) | … |
| bsearch(3posix) | Binary search a sorted table. |
| bsetbg(1) | Utility to manipulate the appearance of the X11 desktop's root window. |
| bsetroot(1) | Blackbox utility to change root window appearance. |
| bsf(1) | Bsf command. |
| bsfilter(1) | Bayesian spam filter. |
| bsh(1) | BeanShell: A Java scripting environment (command-line version). |
| bshell(1) ↣ bssh(1) | Browse for SSH/VNC servers on the local network. |
| bsigs(8) | Program for debugging burp protocol2 manifest files and indexes. |
| bskk(1) | Bayesian estimation for SKK. |
| bsmtp(1) | Bacula's SMTP client (mail submission program). |
| bsod(6x) | Blue Screen of Death emulator. |
| BSON(3pm) | BSON serialization and deserialization. |
| BSON::Binary(3pm) | Legacy BSON type wrapper for binary data (DEPRECATED). |
| BSON::Bool(3pm) | Legacy BSON type wrapper for Booleans (DEPRECATED). |
| BSON::Bytes(3pm) | BSON type wrapper for binary byte strings. |
| BSON::Code(3pm) | BSON type wrapper for Javascript code. |
| BSON::DBRef(3pm) | BSON type wrapper for MongoDB DBRefs. |
| BSON::Decimal128(3pm) | BSON type wrapper for Decimal128. |
| BSON::Doc(3pm) | BSON type wrapper for ordered documents. |
| BSON::Double(3pm) | BSON type wrapper for Double. |
| BSON::Int32(3pm) | BSON type wrapper for Int32. |
| BSON::Int64(3pm) | BSON type wrapper for Int64. |
| BSON::MaxKey(3pm) | BSON type wrapper for MaxKey. |
| BSON::MinKey(3pm) | BSON type wrapper for MinKey. |
| BSON::ObjectId(3pm) | Legacy BSON type wrapper for Object IDs (DEPRECATED). |
| BSON::OID(3pm) | BSON type wrapper for Object IDs. |
| BSON::PP(3pm) | Pure Perl BSON implementation. |
| BSON::Raw(3pm) | BSON type wrapper for pre-encoded BSON documents. |
| BSON::Regex(3pm) | BSON type wrapper for regular expressions. |
| BSON::String(3pm) | BSON type wrapper for strings. |
| BSON::Time(3pm) | BSON type wrapper for date and time. |
| BSON::Timestamp(3pm) | BSON type wrapper for timestamps. |
| BSON::Types(3pm) | Helper functions to wrap BSON type classes. |
| bson_append_array(3) | Bson_append_array(). |
| bson_append_array_begin(3) | Bson_append_array_begin(). |
| bson_append_array_end(3) | Bson_append_array_end(). |
| bson_append_binary(3) | Bson_append_binary(). |
| bson_append_bool(3) | Bson_append_bool(). |
| bson_append_code(3) | Bson_append_code(). |
| bson_append_code_with_scope(3) | Bson_append_code_with_scope(). |
| bson_append_date_time(3) | Bson_append_date_time(). |
| bson_append_dbpointer(3) | Bson_append_dbpointer(). |
| bson_append_decimal128(3) | Bson_append_decimal128(). |
| bson_append_document(3) | Bson_append_document(). |
| bson_append_document_begin(3) | Bson_append_document_begin(). |
| bson_append_document_end(3) | Bson_append_document_end(). |
| bson_append_double(3) | Bson_append_double(). |
| bson_append_int32(3) | Bson_append_int32(). |
| bson_append_int64(3) | Bson_append_int64(). |
| bson_append_iter(3) | Bson_append_iter(). |
| bson_append_maxkey(3) | Bson_append_maxkey(). |
| bson_append_minkey(3) | Bson_append_minkey(). |
| bson_append_now_utc(3) | Bson_append_now_utc(). |
| bson_append_null(3) | Bson_append_null(). |
| bson_append_oid(3) | Bson_append_oid(). |
| bson_append_regex(3) | Bson_append_regex(). |
| bson_append_symbol(3) | Bson_append_symbol(). |
| bson_append_time_t(3) | Bson_append_time_t(). |
| bson_append_timestamp(3) | Bson_append_timestamp(). |
| bson_append_timeval(3) | Bson_append_timeval(). |
| bson_append_undefined(3) | Bson_append_undefined(). |
| bson_append_utf8(3) | Bson_append_utf8(). |
| bson_append_value(3) | Bson_append_value(). |
| bson_array_as_json(3) | Bson_array_as_json(). |
| bson_as_canonical_extended_json(3) | Bson_as_canonical_extended_json(). |
| bson_as_json(3) | Bson_as_json(). |
| bson_as_relaxed_extended_json(3) | Bson_as_relaxed_extended_json(). |
| bson_ascii_strtoll(3) | Bson_ascii_strtoll(). |
| bson_character_and_string_routines(3) | Character and String Routines. |
| bson_check_version(3) | Bson_check_version(). |
| bson_compare(3) | Bson_compare(). |
| bson_concat(3) | Bson_concat(). |
| bson_context_destroy(3) | Bson_context_destroy(). |
| bson_context_get_default(3) | Bson_context_get_default(). |
| bson_context_new(3) | Bson_context_new(). |
| bson_context_t(3) | Bson_context_t. |
| bson_copy(3) | Bson_copy(). |
| bson_copy_to(3) | Bson_copy_to(). |
| bson_copy_to_excluding(3) | Bson_copy_to_excluding(). |
| bson_copy_to_excluding_noinit(3) | Bson_copy_to_excluding_noinit(). |
| bson_count_keys(3) | Bson_count_keys(). |
| bson_creating(3) | Creating a BSON Document. |
| bson_cross_platform_notes(3) | Cross Platform Notes. |
| bson_decimal128_from_string(3) | Bson_decimal128_from_string(). |
| bson_decimal128_t(3) | Bson_decimal128_t. |
| bson_decimal128_to_string(3) | Bson_decimal128_to_string(). |
| bson_destroy(3) | Bson_destroy(). |
| bson_destroy_with_steal(3) | Bson_destroy_with_steal(). |
| bson_endianness(3) | Endianness. |
| bson_equal(3) | Bson_equal(). |
| bson_error_t(3) | Bson_error_t. |
| bson_errors(3) | Handling Errors. |
| bson_free(3) | Bson_free(). |
| bson_get_data(3) | Bson_get_data(). |
| bson_get_major_version(3) | Bson_get_major_version(). |
| bson_get_micro_version(3) | Bson_get_micro_version(). |
| bson_get_minor_version(3) | Bson_get_minor_version(). |
| bson_get_monotonic_time(3) | System Clock. |
| bson_get_version(3) | Bson_get_version(). |
| bson_guides(3) | Guides. |
| bson_has_field(3) | Bson_has_field(). |
| bson_include_and_link(3) | Using libbson In Your C Program. |
| bson_init(3) | Bson_init(). |
| bson_init_from_json(3) | Bson_init_from_json(). |
| bson_init_static(3) | Bson_init_static(). |
| bson_installing(3) | Installing libbson. |
| bson_iter_array(3) | Bson_iter_array(). |
| bson_iter_as_bool(3) | Bson_iter_as_bool(). |
| bson_iter_as_double(3) | Bson_iter_as_double(). |
| bson_iter_as_int64(3) | Bson_iter_as_int64(). |
| bson_iter_binary(3) | Bson_iter_binary(). |
| bson_iter_bool(3) | Bson_iter_bool(). |
| bson_iter_code(3) | Bson_iter_code(). |
| bson_iter_codewscope(3) | Bson_iter_codewscope(). |
| bson_iter_date_time(3) | Bson_iter_date_time(). |
| bson_iter_dbpointer(3) | Bson_iter_dbpointer(). |
| bson_iter_decimal128(3) | Bson_iter_decimal128(). |
| bson_iter_document(3) | Bson_iter_document(). |
| bson_iter_double(3) | Bson_iter_double(). |
| bson_iter_dup_utf8(3) | Bson_iter_dup_utf8(). |
| bson_iter_find(3) | Bson_iter_find(). |
| bson_iter_find_case(3) | Bson_iter_find_case(). |
| bson_iter_find_descendant(3) | Bson_iter_find_descendant(). |
| bson_iter_init(3) | Bson_iter_init(). |
| bson_iter_init_find(3) | Bson_iter_init_find(). |
| bson_iter_init_find_case(3) | Bson_iter_init_find_case(). |
| bson_iter_init_from_data(3) | Bson_iter_init_from_data(). |
| bson_iter_int32(3) | Bson_iter_int32(). |
| bson_iter_int64(3) | Bson_iter_int64(). |
| bson_iter_key(3) | Bson_iter_key(). |
| bson_iter_next(3) | Bson_iter_next(). |
| bson_iter_oid(3) | Bson_iter_oid(). |
| bson_iter_overwrite_bool(3) | Bson_iter_overwrite_bool(). |
| bson_iter_overwrite_decimal128(3) | Bson_iter_overwrite_decimal128(). |
| bson_iter_overwrite_double(3) | Bson_iter_overwrite_double(). |
| bson_iter_overwrite_int32(3) | Bson_iter_overwrite_int32(). |
| bson_iter_overwrite_int64(3) | Bson_iter_overwrite_int64(). |
| bson_iter_recurse(3) | Bson_iter_recurse(). |
| bson_iter_regex(3) | Bson_iter_regex(). |
| bson_iter_symbol(3) | Bson_iter_symbol(). |
| bson_iter_t(3) | Bson_iter_t. |
| bson_iter_time_t(3) | Bson_iter_time_t(). |
| bson_iter_timestamp(3) | Bson_iter_timestamp(). |
| bson_iter_timeval(3) | Bson_iter_timeval(). |
| bson_iter_type(3) | Bson_iter_type(). |
| bson_iter_utf8(3) | Bson_iter_utf8(). |
| bson_iter_value(3) | Bson_iter_value(). |
| bson_iter_visit_all(3) | Bson_iter_visit_all(). |
| bson_json(3) | JSON. |
| bson_json_data_reader_ingest(3) | Bson_json_data_reader_ingest(). |
| bson_json_data_reader_new(3) | Bson_json_data_reader_new(). |
| bson_json_reader_destroy(3) | Bson_json_reader_destroy(). |
| bson_json_reader_new(3) | Bson_json_reader_new(). |
| bson_json_reader_new_from_fd(3) | Bson_json_reader_new_from_fd(). |
| bson_json_reader_new_from_file(3) | Bson_json_reader_new_from_file(). |
| bson_json_reader_read(3) | Bson_json_reader_read(). |
| bson_json_reader_t(3) | Bson_json_reader_t. |
| bson_malloc(3) | Bson_malloc(). |
| bson_malloc0(3) | Bson_malloc0(). |
| bson_md5_append(3) | Bson_md5_append(). |
| bson_md5_finish(3) | Bson_md5_finish(). |
| bson_md5_init(3) | Bson_md5_init(). |
| bson_md5_t(3) | Bson_md5_t. |
| bson_mem_restore_vtable(3) | Bson_mem_restore_vtable(). |
| bson_mem_set_vtable(3) | Bson_mem_set_vtable(). |
| bson_memory(3) | Memory Management. |
| bson_new(3) | Bson_new(). |
| bson_new_from_buffer(3) | Bson_new_from_buffer(). |
| bson_new_from_data(3) | Bson_new_from_data(). |
| bson_new_from_json(3) | Bson_new_from_json(). |
| bson_oid(3) | ObjectIDs. |
| bson_oid_compare(3) | Bson_oid_compare(). |
| bson_oid_copy(3) | Bson_oid_copy(). |
| bson_oid_equal(3) | Bson_oid_equal(). |
| bson_oid_get_time_t(3) | Bson_oid_get_time_t(). |
| bson_oid_hash(3) | Bson_oid_hash(). |
| bson_oid_init(3) | Bson_oid_init(). |
| bson_oid_init_from_data(3) | Bson_oid_init_from_data(). |
| bson_oid_init_from_string(3) | Bson_oid_init_from_string(). |
| bson_oid_init_sequence(3) | Bson_oid_init_sequence(). |
| bson_oid_is_valid(3) | Bson_oid_is_valid(). |
| bson_oid_t(3) | Bson_oid_t. |
| bson_oid_to_string(3) | Bson_oid_to_string(). |
| bson_parsing(3) | Parsing and Iterating BSON Documents. |
| bson_reader_destroy(3) | Bson_reader_destroy(). |
| bson_reader_destroy_func_t(3) | Bson_reader_destroy_func_t. |
| bson_reader_new_from_data(3) | Bson_reader_new_from_data(). |
| bson_reader_new_from_fd(3) | Bson_reader_new_from_fd(). |
| bson_reader_new_from_file(3) | Bson_reader_new_from_file(). |
| bson_reader_new_from_handle(3) | Bson_reader_new_from_handle(). |
| bson_reader_read(3) | Bson_reader_read(). |
| bson_reader_read_func_t(3) | Bson_reader_read_func_t. |
| bson_reader_reset(3) | Bson_reader_reset(). |
| bson_reader_set_destroy_func(3) | Bson_reader_set_destroy_func(). |
| bson_reader_set_read_func(3) | Bson_reader_set_read_func(). |
| bson_reader_t(3) | Bson_reader_t. |
| bson_reader_tell(3) | Bson_reader_tell(). |
| bson_realloc(3) | Bson_realloc(). |
| bson_realloc_ctx(3) | Bson_realloc_ctx(). |
| bson_realloc_func(3) | Bson_realloc_func. |
| bson_reference(3) | Index. |
| bson_reinit(3) | Bson_reinit(). |
| bson_reserve_buffer(3) | Bson_reserve_buffer(). |
| bson_set_error(3) | Bson_set_error(). |
| bson_sized_new(3) | Bson_sized_new(). |
| bson_snprintf(3) | Bson_snprintf(). |
| bson_steal(3) | Bson_steal(). |
| bson_strcasecmp(3) | Bson_strcasecmp(). |
| bson_strdup(3) | Bson_strdup(). |
| bson_strdup_printf(3) | Bson_strdup_printf(). |
| bson_strdupv_printf(3) | Bson_strdupv_printf(). |
| bson_streaming_bson(3) | Streaming BSON. |
| bson_strerror_r(3) | Bson_strerror_r(). |
| bson_strfreev(3) | Bson_strfreev(). |
| bson_string_append(3) | Bson_string_append(). |
| bson_string_append_c(3) | Bson_string_append_c(). |
| bson_string_append_printf(3) | Bson_string_append_printf(). |
| bson_string_append_unichar(3) | Bson_string_append_unichar(). |
| bson_string_free(3) | Bson_string_free(). |
| bson_string_new(3) | Bson_string_new(). |
| bson_string_t(3) | Bson_string_t. |
| bson_string_truncate(3) | Bson_string_truncate(). |
| bson_strncpy(3) | Bson_strncpy(). |
| bson_strndup(3) | Bson_strndup(). |
| bson_strnlen(3) | Bson_strnlen(). |
| bson_subtype_t(3) | Bson_subtype_t. |
| bson_t(3) | Bson_t. |
| bson_threading(3) | Threading. |
| bson_tutorial(3) | Tutorial. |
| bson_type_t(3) | Bson_type_t. |
| bson_uint32_to_string(3) | Bson_uint32_to_string(). |
| bson_unichar_t(3) | Bson_unichar_t. |
| bson_utf8(3) | UTF-8. |
| bson_utf8_escape_for_json(3) | Bson_utf8_escape_for_json(). |
| bson_utf8_from_unichar(3) | Bson_utf8_from_unichar(). |
| bson_utf8_get_char(3) | Bson_utf8_get_char(). |
| bson_utf8_next_char(3) | Bson_utf8_next_char(). |
| bson_utf8_validate(3) | Bson_utf8_validate(). |
| bson_validate(3) | Bson_validate(). |
| bson_validate_with_error(3) | Bson_validate_with_error(). |
| bson_value_copy(3) | Bson_value_copy(). |
| bson_value_destroy(3) | Bson_value_destroy(). |
| bson_value_t(3) | Bson_value_t. |
| bson_version(3) | Libbson Versioning. |
| bson_visitor_t(3) | Bson_visitor_t. |
| bson_vsnprintf(3) | Bson_vsnprintf(). |
| bson_writer_begin(3) | Bson_writer_begin(). |
| bson_writer_destroy(3) | Bson_writer_destroy(). |
| bson_writer_end(3) | Bson_writer_end(). |
| bson_writer_get_length(3) | Bson_writer_get_length(). |
| bson_writer_new(3) | Bson_writer_new(). |
| bson_writer_rollback(3) | Bson_writer_rollback(). |
| bson_writer_t(3) | Bson_writer_t. |
| bson_zero_free(3) | Bson_zero_free(). |
| bsondump(1) | Examine BSON files in human-readable form. |
| bspatch(1) | Apply a patch built with bsdiff(1). |
| bspc(1) ↣ bspwm(1) | Binary space partitioning window manager. |
| bspwm(1) | Binary space partitioning window manager. |
| bsqldb(1) | Batch SQL script processor using DB-Library. |
| bsqlodbc(1) | Batch SQL script processor using ODBC. |
| bss(3) | Bundle Streaming Service library. |
| bssadmin(1) | Interplanetary Internet (IPN) scheme administration interface for use with Bundle Streaming Service. |
| bsscounter(1) ↣ ion-tools(1) | Interplanetary Overlay Network tools, the NASA implementation of Delay-Tolerant Networking (DTN). |
| bssdriver(1) ↣ ion-tools(1) | Interplanetary Overlay Network tools, the NASA implementation of Delay-Tolerant Networking (DTN). |
| bssfw(1) | Bundle route computation task for the IPN scheme, adapted for Bundle Streaming Service. |
| bssh(1) | Browse for SSH/VNC servers on the local network. |
| bssp(3) | Bundle Streaming Service Protocol (BSSP) communications library. |
| bsspadmin(1) | Bundle Streaming Service Protocol (BSSP) administration interface. |
| bsspcli(1) ↣ ion-tools(1) | Interplanetary Overlay Network tools, the NASA implementation of Delay-Tolerant Networking (DTN). |
| bsspclo(1) ↣ ion-tools(1) | Interplanetary Overlay Network tools, the NASA implementation of Delay-Tolerant Networking (DTN). |
| bsspclock(1) ↣ ion-tools(1) | Interplanetary Overlay Network tools, the NASA implementation of Delay-Tolerant Networking (DTN). |
| bssprc(5) | Bundle Streaming Service Protocol management commands file. |
| bssrc(5) | IPN scheme configuration commands file adapted for Bundle Streaming Service. |
| bssrecv(1) | Bundle Streaming Service reception test program. |
| bssStreamingApp(1) | Bundle Streaming Service transmission test program. |
| bstring(3) | Byte string operations. |
| bstyleconvert(1) | A Blackbox style conversion utility. |
| bsvplay(1) | … |
| bswap(3) | Reverse order of bytes. |
| bswap16(9freebsd) | … |
| bswap32(9freebsd) | … |
| bswap64(9freebsd) | … |
| bswap_16(3) ↣ bswap(3) | Reverse order of bytes. |
| bswap_32(3) ↣ bswap(3) | Reverse order of bytes. |
| bswap_64(3) ↣ bswap(3) | Reverse order of bytes. |
| bt(4freebsd) | Buslogic/Mylex MultiMaster SCSI host adapter driver. |
| bt-adapter(1) | A bluetooth adapter manager. |
| bt-agent(1) | A bluetooth agent. |
| bt-device(1) | A bluetooth device manager. |
| bt-network(1) | A bluetooth network manager. |
| bt-obex(1) | A bluetooth OBEX client/server. |
| bt2vrml(1) | Convert from voxels to VRML2.0. |
| bt_format_names(3) | Formatting BibTeX names for consistent output. |
| bt_input(3) | Input/parsing functions in btparse library. |
| bt_language(3) | The BibTeX data language, as recognized by btparse. |
| bt_macros(3) | Accessing and manipulating the btparse macro table. |
| bt_misc(3) | Miscellaneous BibTeX-like string-processing utilities. |
| bt_post_processing(3) | Post-processing of BibTeX strings, values, and entries. |
| bt_postprocess(3) | Post-processing of BibTeX strings, values, and entries. |
| bt_split_names(3) | Splitting up BibTeX names and lists of names. |
| bt_traversal(3) | AST traversal/query functions in btparse library. |
| btag(1) | A command line based multimedia tagger. |
| btanks(6) | Fast 2D tank arcade game. |
| btape(8) | Bacula's Tape interface test program. |
| btattach(1) | Attach serial devices to BlueZ stack. |
| btcflash(8) | Firmware flash utility for BTC DRW1008 DVD+/-RW recorder. |
| btcheck(1) | Bittorrent downloaded data checker. |
| btcli(1) | Command line interface to btpd. |
| btcompletedir.bittornado(1) | Creates torrent meta-info files for all files/directories within a directory. |
| btcompletedir.bittorrent(1) | Makes a .torrent file for every specified file. |
| btcompletedirgui.bittornado(1) | GUI interface to create torrent meta-info files for all files/directories within a direc‐. |
| btcompletedirgui.bittorrent(1) | GUI tool for creating .torrent files. |
| btcopyannounce(1) | Copy torrent announce information to other torrents. |
| btdownloadcurses.bittornado(1) | Curses bittornado download interface. |
| btdownloadcurses.bittorrent(1) ↣ bittorrent-downloader.bittorrent(1) | Download files using a scatter-gather network. |
| btdownloadgui.bittornado(1) | GUI bittorrent download interface. |
| btdownloadgui.bittorrent(1) ↣ bittorrent-downloader.bittorrent(1) | Download files using a scatter-gather network. |
| btdownloadheadless.bittornado(1) | Headless bittorrent download interface. |
| btdownloadheadless.bittorrent(1) ↣ bittorrent-downloader.bittorrent(1) | Download files using a scatter-gather network. |
| btedit(1) | Direct editing of BTREE records. |
| bterm(1) | Framebuffer terminal emulator. |
| btfs(1) | Mount torrent files or magnet links as a file system. |
| bti(1) | Send a tweet to twitter.com from the command line. |
| bti-shrink-urls(1) | Convert URLs to a shorter form using a web service. |
| btinfo(1) | BitTorrent Protocol Daemon information. |
| btlaunchmany.bittornado(1) | Launch multiple torrent downloads, using a text interface. |
| btlaunchmany.bittorrent(1) ↣ bittorrent-multi-downloader.bittorrent(1) | Multiple file clients for bittorrent. |
| btlaunchmanycurses.bittornado(1) | Launch multiple torrent downloads, using a curses interface. |
| btlaunchmanycurses.bittorrent(1) ↣ bittorrent-multi-downloader.bittorrent(1) | Multiple file clients for bittorrent. |
| btmakemetafile.bittornado(1) | Generates torrent meta-info files for use with bittorrent. |
| btmakemetafile.bittorrent(1) | Program to generate torrent info files for bittorrent. |
| btmaketorrentgui(1) | GUI program to generate torrent meta-info files for use with bittorrent. |
| btmon(1) | Bluetooth monitor. |
| BtoA(1) | Convert binary base-64 encoded data to ASCII base-64 encoded data. |
| btool_faq(3) | Frequently-Asked Questions about btparse and Text::BibTeX. |
| btowc(3) | Convert single byte to wide character. |
| btowc(3posix) | Single byte to wide character conversion. |
| btparse(3) | C library for parsing and processing BibTeX data files. |
| btpd(1) | BitTorrent Protocol Daemon. |
| btplay(1) | Directly play video torrents using btfs. |
| btrace(8) | Perform live tracing for block devices. |
| btraceback(1) | Wrapper script around gdb and bsmtp. |
| btrbk(1) | Backup tool for btrfs subvolumes. |
| btrbk.conf(5) | Btrbk configuration file. |
| btreannounce.bittornado(1) | Change the announce address of a torrent file. |
| btreannounce.bittorrent(1) | Change the announce address of a torrent file. |
| btrecord(8) | Recreate IO loads recorded by blktrace. |
| btree(3) | Btree database access method. |
| btrename.bittornado(1) | Change the suggested filename inside a bittorrent file. |
| btrename.bittorrent(1) | Change the suggested filename inside a bittorrent file. |
| btreplay(8) | Recreate IO loads recorded by blktrace. |
| btrfs(5) | Topics about the BTRFS filesystem (mount options, supported file attributes and other). |
| btrfs(8) | A toolbox to manage btrfs filesystems. |
| btrfs-balance(8) | Balance block groups on a btrfs filesystem. |
| btrfs-check(8) | Check or repair a btrfs filesystem. |
| btrfs-convert(8) | Convert from ext2/3/4 or reiserfs filesystem to btrfs in-place. |
| btrfs-debug-tree(8) ↣ btrfs-inspect-internal(8) | Query various internal information. |
| btrfs-device(8) | Manage devices of btrfs filesystems. |
| btrfs-extent-same(8) | Directly access the btrfs-extent-same ioctl. |
| btrfs-filesystem(8) | Command group othat primarily does work on the whole filesystems. |
| btrfs-find-root(8) | Filter to find btrfs root. |
| btrfs-heatmap(8) | Visualize the layout of data on your btrfs filesystem. |
| btrfs-image(8) | Create/restore an image of the filesystem. |
| btrfs-inspect-internal(8) | Query various internal information. |
| btrfs-map-logical(8) | Map btrfs logical extent to physical extent. |
| btrfs-property(8) | Get/set/list properties for given filesystem object. |
| btrfs-qgroup(8) | Control the quota group of a btrfs filesystem. |
| btrfs-quota(8) | Control the global quota status of a btrfs filesystem. |
| btrfs-receive(8) | Receive subvolumes from send stream. |
| btrfs-replace(8) | Replace devices managed by btrfs with other device. |
| btrfs-rescue(8) | Recover a damaged btrfs filesystem. |
| btrfs-restore(8) | Try to restore files from a damaged btrfs filesystem image. |
| btrfs-scrub(8) | Scrub btrfs filesystem, verify block checksums. |
| btrfs-select-super(8) | Overwrite primary superblock with a backup copy. |
| btrfs-send(8) | Generate a stream of changes between two subvolume snapshots. |
| btrfs-show-super(8) ↣ btrfs-inspect-internal(8) | Query various internal information. |
| btrfs-subvolume(8) | Manage btrfs subvolumes. |
| btrfs-zero-log(8) ↣ btrfs-rescue(8) | Recover a damaged btrfs filesystem. |
| btrfsck(8) ↣ btrfs-check(8) | Check or repair a btrfs filesystem. |
| btrfsdist-bpfcc(8) | Summarize btrfs operation latency. Uses Linux eBPF/bcc. |
| btrfsslower-bpfcc(8) | Trace slow btrfs file operations, with per-event details. |
| btrfstune(8) | Tune various filesystem parameters. |
| bts(1) | Developers' command line interface to the BTS. |
| bts-retitle(1) | … |
| btscanner(1) | Ncurses-based scanner for Bluetooth devices. |
| btsethttpseeds(1) | Sets http-seeds information in torrents. |
| btshowmetainfo.bittornado(1) | Display the meta-information in bittorrent files. |
| btshowmetainfo.bittorrent(1) | Display information in bittorrent files. |
| btt(1) | Analyse block i/o traces produces by blktrace. |
| bttrack.bittornado(1) | Bittorrent tracker. |
| bttrack.bittorrent(1) | Tracker for bittorrent. |
| btwisted(1e) | Calculate the twisting in a B-DNA sequence. |
| btyacc(1) | An LALR(1) parser generator with support for backtracking. |
| bu2sw(1) | Backup data to OpenStack Swift. |
| bu2sw3(1) | Backup data to OpenStack Swift. |
| bubble3d(6x) | 3d rising bubbles. |
| bubblefishymon(1) | System load meter with ducks and fish. |
| bubbros(6) | Generic startup script for bub-n-bros. |
| bubbros-client(6) | The bub-n-bros client. |
| bubbros-server(6) | The bub-n-bros server. |
| buble(1) | Fast ES2015 compiler for Node.js. |
| bucardo(1p) | Utility script for controlling the Bucardo program. |
| Bucardo(3pm) | Postgres multi-master replication system. |
| buckle(1) | Nostalgia bucklespring keyboard sound. |
| buddy-ng(1) | A tool to work with easside-ng. |
| budgie-daemon(1) | Desktop Daemon that is auto-run on logon. |
| budgie-desktop(1) | GNOME Session binary for budgie-desktop. |
| budgie-desktop-settings(22) | Settings window for budgie-desktop. |
| budgie-panel(1) | Budgie-desktop panel. |
| budgie-polkit-dialog(1) | Policy Kit Window Dialog for budgie-desktop. |
| budgie-run-dialog(1) | ALT+F2 window for launching applications. |
| budgie-welcome(1) | Welcome screen for Ubuntu Budgie. |
| budgie-wm(1) | Budgie window manager. |
| buf(9freebsd) | Kernel buffer I/O scheme used in FreeBSD VM system. |
| BUF_ISLOCKED(9freebsd) | Returns the state of the lock linked to the buffer. |
| BUF_LOCK(9freebsd) | Locks a buffer. |
| BUF_LOCKFREE(9freebsd) | Destroys a buffer's lock. |
| BUF_LOCKINIT(9freebsd) | Initializes a buffer lock. |
| BUF_MEM_free(3ssl) ↣ BUF_MEM_new(3ssl) | Simple character. |
| BUF_MEM_grow(3ssl) ↣ BUF_MEM_new(3ssl) | Simple character. |
| BUF_MEM_grow_clean(3ssl) ↣ BUF_MEM_new(3ssl) | Simple character. |
| BUF_MEM_new(3ssl) | Simple character. |
| BUF_MEM_new_ex(3ssl) ↣ BUF_MEM_new(3ssl) | Simple character. |
| BUF_RECURSED(9freebsd) | Checks if the lock linked to the buffer is recursed. |
| BUF_reverse(3ssl) ↣ BUF_MEM_new(3ssl) | Simple character. |
| buf_ring(9freebsd) | … |
| buf_ring_alloc(9freebsd) | … |
| buf_ring_count(9freebsd) | … |
| buf_ring_dequeue_mc(9freebsd) | … |
| buf_ring_dequeue_sc(9freebsd) | … |
| buf_ring_empty(9freebsd) | … |
| buf_ring_enqueue(9freebsd) | … |
| buf_ring_enqueue_bytes(9freebsd) | … |
| buf_ring_free(9freebsd) | … |
| buf_ring_full(9freebsd) | … |
| buf_ring_peek(9freebsd) | … |
| BUF_TIMELOCK(9freebsd) | Locks a buffer. |
| BUF_UNLOCK(9freebsd) | Unlocks a locked buffer. |
| buffchan(8) | Buffered file-writing backend for INN. |
| buffer(1) | Very fast reblocking program. |
| buffer(3) | Generic read/write buffering. |
| Buffer(3o) | Extensible buffers. |
| buffer.h(3) | Object passing services between threads. |
| buffer_close(3) | Close buffer. |
| buffer_feed(3) | Low-level component of buffer_get. |
| buffer_flush(3) | Feed buffer to write function. |
| buffer_fromarray(3) | Initialize buffer structure from array. |
| buffer_frombuf(3) | Initialize buffer structure from raw memory. |
| buffer_fromsa(3) | Initialize buffer structure from stralloc. |
| buffer_get(3) | Read binary data from buffer. |
| buffer_get_new_token_sa(3) | Read token from buffer. |
| buffer_get_new_token_sa_pred(3) | Read token from buffer. |
| buffer_get_token(3) | Read token from buffer. |
| buffer_get_token_pred(3) | Read token from buffer. |
| buffer_get_token_sa(3) | Read token from buffer. |
| buffer_get_token_sa_pred(3) | Read token from buffer. |
| buffer_getc(3) | Read one char from buffer. |
| buffer_getline(3) | Read line from buffer. |
| buffer_getline_sa(3) | Read line from buffer. |
| buffer_getn(3) | Read binary data from buffer. |
| buffer_getnewline_sa(3) | Read line from buffer. |
| buffer_init(3) | Initialize buffer structure. |
| buffer_init_free(3) | Initialize buffer structure. |
| buffer_mmapread(3) | Create read-only memory-mapped file buffer. |
| buffer_peek(3) | Return pointer to string in buffer. |
| buffer_put(3) | Write binary data to buffer. |
| buffer_put8long(3) | Write an octal ASCII representation of an unsigned long integer to buffer. |
| buffer_putalign(3) | Write binary data to buffer. |
| buffer_puterror(3) | Write error string to buffer and flush. |
| buffer_puterror2(3) | Write error string to buffer and flush. |
| buffer_putflush(3) | Write binary data to buffer and flush. |
| buffer_putlong(3) | Write a decimal ASCII representation of a signed long integer to buffer. |
| buffer_putlonglong(3) | Write a decimal ASCII representation of a signed long integer to buffer. |
| buffer_putm(3) | Write ASCIIZ string(s) to buffer. |
| buffer_putnlflush(3) | Write '\n' to buffer and flush. |
| buffer_puts(3) | Write ASCIIZ string to buffer. |
| buffer_putsa(3) | Write stralloc to buffer. |
| buffer_putsaflush(3) | Write stralloc to buffer and flush. |
| buffer_putsalign(3) | Write ASCIIZ string to buffer. |
| buffer_putsflush(3) | Write ASCIIZ string to buffer and flush. |
| buffer_putspace(3) | Write ASCII space to buffer. |
| buffer_putulong(3) | Write a decimal ASCII representation of an unsigned long integer to buffer. |
| buffer_putulonglong(3) | Write a decimal ASCII representation of a signed long integer to buffer. |
| buffer_putxlong(3) | Write a hexidecimal ASCII representation of an unsigned long integer to buffer. |
| buffer_seek(3) | Remove bytes from beginning of string in buffer. |
| buffer_tosa(3) | Initialize buffer for writing to stralloc. |
| buffindexed.conf(5) | Configuration for the buffindexed overview method. |
| buffy(1) | Mail folder monitor. Monitor new and unread messages in a collection of mail folders. |
| buffycli(1p) | Text mode alternative to Buffy. Monitors new and unread messages in a collection of mail folders. |
| bugmenot(1sr) ↣ elvi(1sr) | Surfraw(1) search tools. |
| bugpoint(1) ↣ bugpoint-6.0(1) | Automatic test case reduction tool. |
| bugpoint-3.9(1) | Automatic test case reduction tool. |
| bugpoint-4.0(1) | Automatic test case reduction tool. |
| bugpoint-5.0(1) | Automatic test case reduction tool. |
| bugpoint-6.0(1) | Automatic test case reduction tool. |
| bugpoint-7(1) | Automatic test case reduction tool. |
| bugpoint-8(1) | Automatic test case reduction tool. |
| bugpoint-9(1) | Automatic test case reduction tool. |
| bugsquish(6) | Bugs are trying to suck blood out of your arm!. |
| bugsx(1x) | Display and evolve biomorphs. |
| bugz(1) | Command line interface to bugzilla. |
| bugzilla(1) | Command-line interface to Bugzilla over XML-RPC. |
| bugzilla(1sr) ↣ elvi(1sr) | Surfraw(1) search tools. |
| buici-clock(1) | Attractive X11 clock. |
| build-astrometry-index(1) | Create astrometry.net index files. |
| build-lives-rfx-plugin(1) | Builds rendered effects for LiVES. |
| build-lives-rfx-plugin-multi(1) | Builds rendered effects for LiVES. |
| build-progress.sh(1) | Show kde-build progress in your konsole/xterm title bar. |
| build-publicfile(1) ↣ publicfile-installer(1) | Get, build and install publicfile. |
| build-rdeps(1) | Find packages that depend on a specific package to build (reverse build depends). |
| build-simple-cdd(1) ↣ simple-cdd(1) | Create custom debian-installer images. |
| build.xml(5) | Configuration file used by Apache Ant to build projects. |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_doc_examples_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_doc_examples_asmdemo_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_doc_examples_demo_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_doc_examples_largedemo_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_doc_examples_stdiodemo_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_doc_examples_twitest_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_include_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_include_avr_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_include_compat_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_include_util_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_libc_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_libc_misc_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_libc_pmstring_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_libc_stdio_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_libc_stdlib_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_libc_string_(3avr) | … |
| _build_avr-libc-dWT1pc_avr-libc-2.0.0_Atmel3.6.0_libc_avr-libc_libc_time_(3avr) | … |
| _build_libcaca-lVi9Rs_libcaca-0.99.beta19_caca_(3caca) | … |
| _build_libcaca-lVi9Rs_libcaca-0.99.beta19_caca_codec_(3caca) | … |
| _build_libcaca-lVi9Rs_libcaca-0.99.beta19_caca_driver_(3caca) | … |
| _build_libcaca-lVi9Rs_libcaca-0.99.beta19_ruby_(3caca) | … |
| _build_libccrtp-8SQt5d_libccrtp-2.0.9_src_(3) | … |
| _build_libccrtp-8SQt5d_libccrtp-2.0.9_src_ccrtp_(3) | … |
| _build_libcommoncpp2-u8dGJ1_libcommoncpp2-1.8.1_inc_(3) | … |
| _build_libcommoncpp2-u8dGJ1_libcommoncpp2-1.8.1_inc_cc___(3) | … |
| _build_libexosip2-zgFiij_libexosip2-4.1.0_include_.1.0_include_(3) | … |
| _build_libexosip2-zgFiij_libexosip2-4.1.0_include_eXosip2_.1.0_include_eXosip2_(3) | … |
| buildapp(1) | Application to create common lisp images. |
| buildbot(1) | A tool for managing buildbot master instances. |
| buildbot-worker(1) | A tool for managing buildbot worker instances. |
| buildd(1) | Package autobuilder daemon. |
| buildd-mail(1) | Mail answer processor for buildd. |
| buildd-mail-wrapper(1) ↣ buildd-mail(1) | Mail answer processor for buildd. |
| buildd-uploader(1) | Upload built packages for buildd. |
| buildd-vlog(1) | View current build log. |
| buildd-watcher(1) | Watch buildd activity. |
| buildd.conf(5) | Configuration file for buildd. |
| builddbm(8) | Build radius user database. |
| builder(1) | Go continuous build client. |
| builder-c++(1) | G++ wrapper to facilitate pentium-optimizations. |
| builder-cc(1) | Gcc wrapper to facilitate pentium-optimizations. |
| buildhash(1) ↣ ispell(1) | Interactive spelling checking. |
| buildMetarDB(1) | Build databases for METAR stations. |
| buildnotify(1) | Cruise Control CI build monitor. |
| buildrdswindow(3) | Builds windowing of a figure. |
| buildtorrent(1) | A torrent file creation program. |
| Builtin_attributes(3o) | No description. |
| buku(1) | Command-line bookmark manager with browser integration. |
| bulk(8) | Daemon for submitting messages to SMTP engine. |
| bumblebeed(1) | Bumblebee daemon. |
| bumprace(6) | A simple arcade game. |
| bumps(1) | Data fitting and Bayesian uncertainty modeling for inverse problems. |
| bumps(6x) | Move distorting spotlight around desktop. |
| bumps2(1) | Data fitting and Bayesian uncertainty modeling for inverse problems. |
| bumpversion(1) | Version-bump your software. |
| bundle(1) | Ruby Dependency Management. |
| bundle-add(1) | Add gem to the Gemfile and run bundle install. |
| bundle-binstubs(1) | Install the binstubs of the listed gems. |
| bundle-check(1) | Verifies if dependencies are satisfied by installed gems. |
| bundle-clean(1) | Cleans up unused gems in your bundler directory. |
| bundle-config(1) | Set bundler configuration options. |
| bundle-exec(1) | Execute a command in the context of the bundle. |
| bundle-gem(1) | Generate a project skeleton for creating a rubygem. |
| bundle-info(1) | Show information for the given gem in your bundle. |
| bundle-init(1) | Generates a Gemfile into the current working directory. |
| bundle-inject(1) | Add named gem(s) with version requirements to Gemfile. |
| bundle-install(1) | Install the dependencies specified in your Gemfile. |
| bundle-lock(1) | Creates / Updates a lockfile without installing. |
| bundle-open(1) | Opens the source directory for a gem in your bundle. |
| bundle-outdated(1) | List installed gems with newer versions available. |
| bundle-package(1) | Package your needed .gem files into your application. |
| bundle-platform(1) | Displays platform compatibility information. |
| bundle-pristine(1) | Restores installed gems to their pristine condition. |
| bundle-show(1) | Shows all the gems in your bundle, or the path to a gem. |
| bundle-update(1) | Update your gems to the latest available versions. |
| bundle-viz(1) | Generates a visual dependency graph for your Gemfile. |
| Bundle::Apache2(3pm) | Install Apache mod_perl2 and related modules. |
| Bundle::Apache::ASP(3pm) | Install Apache::ASP and required. |
| Bundle::Apache::ASP::Extra(3pm) | Install modules that provide additional functionality to Apache::ASP. |
| Bundle::ApacheTest(3pm) | A bundle to install all Apache-Test related modules. |
| Bundle::DBD::CSV(3pm) | A bundle to install the DBD::CSV driver. |
| Bundle::DBD::Pg(3pm) | A bundle to install all DBD::Pg related modules. |
| Bundle::DBI(3pm) | A bundle to install DBI and required modules. |
| Bundle::Net::LDAP(3pm) | A bundle for Net::LDAP. |
| Bundle::Object::InsideOut(3pm) | A bundle of modules for full Object::InsideOut support. |
| Bundle::pRPC-modules(3pm) | A bundle to install pRPC-modules and prerequisites. |
| Bundle::SNMP::MIB::Compiler(3pm) | A bundle to install all SNMP::MIB::Compiler related modules. |
| bundledoc(1) | Bundle all the files needed by a LaTeX document. |
| bundler(1) ↣ bundle(1) | Ruby Dependency Management. |
| bunzip2(1) ↣ bzip2(1) | A block-sorting file compressor, v1.0.6. |
| buoyantBoussinesqPimpleFoam(1) | Is the part of OpenFOAM - a free, open source CFD software. |
| buoyantBoussinesqSimpleFoam(1) | Is the part of OpenFOAM - a free, open source CFD software. |
| buoyantPimpleFoam(1) | Is the part of OpenFOAM - a free, open source CFD software. |
| buoyantSimpleFoam(1) | Is the part of OpenFOAM - a free, open source CFD software. |
| bup(1) | Backup program using rolling checksums and git file formats. |
| bup-bloom(1) | Generates, regenerates, updates bloom filters. |
| bup-cat-file(1) | Extract archive content (low-level). |
| bup-daemon(1) | Listens for connections and runs bup server. |
| bup-damage(1) | Randomly destroy blocks of a file. |
| bup-drecurse(1) | Recursively list files in your filesystem. |
| bup-fsck(1) | Verify or repair a bup repository. |
| bup-ftp(1) | Ftp-like client for navigating bup repositories. |
| bup-fuse(1) | Mount a bup repository as a filesystem. |
| bup-gc(1) | Remove unreferenced, unneeded data (CAUTION: EXPERIMENTAL). |
| bup-help(1) | Open the documentation for a given bup command. |
| bup-import-duplicity(1) | Import duplicity backups. |
| bup-import-rdiff-backup(1) | Import a rdiff-backup archive. |
| bup-import-rsnapshot(1) | Import a rsnapshot archive. |
| bup-index(1) | Print and/or update the bup filesystem index. |
| bup-init(1) | Initialize a bup repository. |
| bup-join(1) | Concatenate files from a bup repository. |
| bup-ls(1) | List the contents of a bup repository. |
| bup-margin(1) | Figure out your deduplication safety margin. |
| bup-memtest(1) | Test bup memory usage statistics. |
| bup-meta(1) | Create or extract a metadata archive. |
| bup-midx(1) | Create a multi-index (.midx) file from several .idx files. |
| bup-mux(1) | Multiplexes data and error streams over a connection. |
| bup-newliner(1) | Make sure progress messages don't overlap with output. |
| bup-on(1) | Run a bup server locally and client remotely. |
| bup-prune-older(1) | Remove older saves (CAUTION: EXPERIMENTAL). |
| bup-random(1) | Generate a stream of random output. |
| bup-restore(1) | Extract files from a backup set. |
| bup-rm(1) | Remove references to archive content (CAUTION: EXPERIMENTAL). |
| bup-save(1) | Create a new bup backup set. |
| bup-server(1) | The server side of the bup client-server relationship. |
| bup-split(1) | Save individual files to bup backup sets. |
| bup-tag(1) | Tag a commit in the bup repository. |
| bup-tick(1) | Wait for up to one second. |
| bup-web(1) | Start web server to browse bup repositiory. |
| burgerspace(6) | A hamburger-smashing video game. |
| burgerspace-server(6) | UDP server for the networked version of BurgerSpace. |
| burn(1) | Record from various sources to optical media (CD, DVD). |
| burn-configure(1) | Create a configuration file for burn(1). |
| burner(1) | Simple and easy to use CD/DVD burning application for the Gnome Desktop. |
| burp(8) | BackUp and Restore Program. |
| burp_ca(8) | Program for generating certificates for use with burp. |
| burst(1mh) | Explode digests into nmh messages. |
| bus(8) ↣ les(8) | ATM LAN Emulation service demons. |
| bus_activate_resource(9freebsd) | Activate or deactivate a resource. |
| BUS_ADD_CHILD(9freebsd) | Add a device node to the tree with a given priority. |
| bus_adjust_resource(9freebsd) | Adjust resource allocated from a parent bus. |
| bus_alloc_resource(9freebsd) | Allocate resources from a parent bus. |
| bus_alloc_resource_any(9freebsd) | Allocate resources from a parent bus. |
| BUS_BIND_INTR(9freebsd) | Bind an interrupt resource to a specific CPU. |
| bus_bind_intr(9freebsd) | Bind an interrupt resource to a specific CPU. |
| BUS_CHILD_DELETED(9freebsd) | Notify a bus device that a child is being deleted. |
| BUS_CHILD_DETACHED(9freebsd) | Notify a bus device that a child was detached. |
| bus_child_present(9freebsd) | Ask the bus driver to see if this device is still really present. |
| BUS_CONFIG_INTR(9freebsd) | Configure interrupt polarity and trigger mode. |
| bus_deactivate_resource(9freebsd) | Activate or deactivate a resource. |
| BUS_DESCRIBE_INTR(9freebsd) | Associate a description with an active interrupt handler. |
| bus_describe_intr(9freebsd) | Associate a description with an active interrupt handler. |
| bus_dma(9freebsd) | … |
| bus_dma_tag_create(9freebsd) | … |
| bus_dma_tag_destroy(9freebsd) | … |
| bus_dmamap_create(9freebsd) | … |
| bus_dmamap_destroy(9freebsd) | … |
| bus_dmamap_load(9freebsd) | … |
| bus_dmamap_load_bio(9freebsd) | … |
| bus_dmamap_load_ccb(9freebsd) | … |
| bus_dmamap_load_mbuf(9freebsd) | … |
| bus_dmamap_load_mbuf_sg(9freebsd) | … |
| bus_dmamap_load_uio(9freebsd) | … |
| bus_dmamap_sync(9freebsd) | … |
| bus_dmamap_unload(9freebsd) | … |
| bus_dmamem_alloc(9freebsd) | … |
| bus_dmamem_free(9freebsd) | … |
| bus_generic_attach(9freebsd) | Generic implementation of DEVICE_ATTACH for busses. |
| bus_generic_detach(9freebsd) | Generic implementation of DEVICE_DETACH for busses. |
| bus_generic_new_pass(9freebsd) | Generic implementation of BUS_NEW_PASS for bus devices. |
| bus_generic_print_child(9freebsd) | Generic implementation of DEVICE_PRINT_CHILD for busses. |
| bus_generic_read_ivar(9freebsd) | Generic implementation of BUS_READ_IVAR and BUS_WRITE_IVAR for. |
| bus_generic_shutdown(9freebsd) | Generic implementation of DEVICE_SHUTDOWN for busses. |
| bus_generic_write_ivar(9freebsd) | Generic implementation of BUS_READ_IVAR and BUS_WRITE_IVAR for. |
| BUS_GET_CPUS(9freebsd) | Request a set of device-specific CPUs. |
| bus_get_cpus(9freebsd) | Request a set of device-specific CPUs. |
| bus_get_resource(9freebsd) | Read a resource range/value with a given resource ID. |
| bus_map_resource(9freebsd) | Map or unmap an active resource. |
| BUS_NEW_PASS(9freebsd) | Notify a bus that the pass level has been changed. |
| BUS_PRINT_CHILD(9freebsd) | Print information about a device. |
| BUS_READ_IVAR(9freebsd) | Manipulate bus-specific device instance variables. |
| bus_release_resource(9freebsd) | Release resources on a bus. |
| BUS_RESCAN(9freebsd) | Rescan a bus checking for devices that have been added or removed. |
| bus_set_pass(9freebsd) | Raise the bus pass level. |
| bus_set_resource(9freebsd) | Associate a definite resource with a given resource ID. |
| BUS_SETUP_INTR(9freebsd) | Create, attach and teardown an interrupt. |
| bus_setup_intr(9freebsd) | Create, attach and teardown an interrupt. |
| bus_space(9freebsd) | … |
| bus_space_alloc(9freebsd) | … |
| bus_space_barrier(9freebsd) | … |
| bus_space_copy_region_1(9freebsd) | … |
| bus_space_copy_region_2(9freebsd) | … |
| bus_space_copy_region_4(9freebsd) | … |
| bus_space_copy_region_8(9freebsd) | … |
| bus_space_copy_region_stream_1(9freebsd) | … |
| bus_space_copy_region_stream_2(9freebsd) | … |
| bus_space_copy_region_stream_4(9freebsd) | … |
| bus_space_copy_region_stream_8(9freebsd) | … |
| bus_space_free(9freebsd) | … |
| bus_space_map(9freebsd) | … |
| bus_space_read_1(9freebsd) | … |
| bus_space_read_2(9freebsd) | … |
| bus_space_read_4(9freebsd) | … |
| bus_space_read_8(9freebsd) | … |
| bus_space_read_multi_1(9freebsd) | … |
| bus_space_read_multi_2(9freebsd) | … |
| bus_space_read_multi_4(9freebsd) | … |
| bus_space_read_multi_8(9freebsd) | … |
| bus_space_read_multi_stream_1(9freebsd) | … |
| bus_space_read_multi_stream_2(9freebsd) | … |
| bus_space_read_multi_stream_4(9freebsd) | … |
| bus_space_read_multi_stream_8(9freebsd) | … |
| bus_space_read_region_1(9freebsd) | … |
| bus_space_read_region_2(9freebsd) | … |
| bus_space_read_region_4(9freebsd) | … |
| bus_space_read_region_8(9freebsd) | … |
| bus_space_read_region_stream_1(9freebsd) | … |
| bus_space_read_region_stream_2(9freebsd) | … |
| bus_space_read_region_stream_4(9freebsd) | … |
| bus_space_read_region_stream_8(9freebsd) | … |
| bus_space_read_stream_1(9freebsd) | … |
| bus_space_read_stream_2(9freebsd) | … |
| bus_space_read_stream_4(9freebsd) | … |
| bus_space_read_stream_8(9freebsd) | … |
| bus_space_set_multi_1(9freebsd) | … |
| bus_space_set_multi_2(9freebsd) | … |
| bus_space_set_multi_4(9freebsd) | … |
| bus_space_set_multi_8(9freebsd) | … |
| bus_space_set_multi_stream_1(9freebsd) | … |
| bus_space_set_multi_stream_2(9freebsd) | … |
| bus_space_set_multi_stream_4(9freebsd) | … |
| bus_space_set_multi_stream_8(9freebsd) | … |
| bus_space_set_region_1(9freebsd) | … |
| bus_space_set_region_2(9freebsd) | … |
| bus_space_set_region_4(9freebsd) | … |
| bus_space_set_region_8(9freebsd) | … |
| bus_space_set_region_stream_1(9freebsd) | … |
| bus_space_set_region_stream_2(9freebsd) | … |
| bus_space_set_region_stream_4(9freebsd) | … |
| bus_space_set_region_stream_8(9freebsd) | … |
| bus_space_subregion(9freebsd) | … |
| bus_space_unmap(9freebsd) | … |
| bus_space_write_1(9freebsd) | … |
| bus_space_write_2(9freebsd) | … |
| bus_space_write_4(9freebsd) | … |
| bus_space_write_8(9freebsd) | … |
| bus_space_write_multi_1(9freebsd) | … |
| bus_space_write_multi_2(9freebsd) | … |
| bus_space_write_multi_4(9freebsd) | … |
| bus_space_write_multi_8(9freebsd) | … |
| bus_space_write_multi_stream_1(9freebsd) | … |
| bus_space_write_multi_stream_2(9freebsd) | … |
| bus_space_write_multi_stream_4(9freebsd) | … |
| bus_space_write_multi_stream_8(9freebsd) | … |
| bus_space_write_region_1(9freebsd) | … |
| bus_space_write_region_2(9freebsd) | … |
| bus_space_write_region_4(9freebsd) | … |
| bus_space_write_region_8(9freebsd) | … |
| bus_space_write_region_stream_1(9freebsd) | … |
| bus_space_write_region_stream_2(9freebsd) | … |
| bus_space_write_region_stream_4(9freebsd) | … |
| bus_space_write_region_stream_8(9freebsd) | … |
| bus_space_write_stream_1(9freebsd) | … |
| bus_space_write_stream_2(9freebsd) | … |
| bus_space_write_stream_4(9freebsd) | … |
| bus_space_write_stream_8(9freebsd) | … |
| BUS_TEARDOWN_INTR(9freebsd) | Create, attach and teardown an interrupt. |
| bus_teardown_intr(9freebsd) | Create, attach and teardown an interrupt. |
| bus_unmap_resource(9freebsd) | Map or unmap an active resource. |
| BUS_WRITE_IVAR(9freebsd) | Manipulate bus-specific device instance variables. |
| busctl(1) | Introspect the bus. |
| busdma(9freebsd) | … |
| buserver(8) | Initializes the Backup Server. |
| Business::BR(3pm) | Root for namespace of Brazilian business-related modules. |
| Business::BR::Biz(3pm) | DEPRECATED (was: Modules for Brazilian business-related subjects). |
| Business::BR::CNPJ(3pm) | Perl module to test for correct CNPJ numbers. |
| Business::BR::CPF(3pm) | Perl module to test for correct CPF numbers. |
| Business::BR::Ids(3pm) | Modules for dealing with Brazilian identification codes (CPF, CNPJ, ...). |
| Business::BR::Ids::Common(3pm) | Common code used in Business-BR-Ids modules. |
| Business::BR::IE(3pm) | Perl module to test for correct IE numbers. |
| Business::BR::PIS(3pm) | Perl module to test for correct PIS numbers. |
| Business::CreditCard(3pm) | Validate/generate credit card checksums/names. |
| Business::EDI(3pm) | Top level class for generating U.N. EDI interchange objects and subobjects. |
| Business::EDI::CodeList(3pm) | Abstract object class for UN/EDIFACT objects that do not have further descendant. |
| Business::EDI::Composite(3pm) | EDI Composite class. |
| Business::EDI::Spec(3pm) | Object class for CSV-based U.N. EDI specifications. |
| Business::Edifact::Interchange(3pm) | Parse Edifact Messages For Book Ordering. |
| Business::Edifact::Message(3pm) | Class that models Edifact Messages. |
| Business::Edifact::Message::LineItem(3pm) | Model an individual Item Line in a message. |
| Business::FraudDetect(3pm) | A cohort to Business::OnlinePayment. |
| Business::FraudDetect::preCharge(3pm) | Backend for Business::FraudDetect (part of Business::OnlinePayment). |
| Business::Hours(3pm) | Calculate business hours in a time period. |
| Business::ISBN(3pm) | Work with International Standard Book Numbers. |
| Business::ISBN10(3pm) | Work with 10 digit International Standard Book Numbers. |
| Business::ISBN13(3pm) | Work with 13 digit International Standard Book Numbers. |
| Business::ISBN::Data(3pm) | Data pack for Business::ISBN. |
| Business::ISMN(3pm) | Work with International Standard Music Numbers. |
| Business::ISMN::Data(3pm) | Data pack for Business::ISMN. |
| Business::ISSN(3pm) | Perl extension for International Standard Serial Numbers. |
| Business::OnlinePayment(3pm) | Perl extension for online payment processing. |
| Business::OnlinePayment::AuthorizeNet(3pm) | AuthorizeNet backend for Business::OnlinePayment. |
| Business::OnlinePayment::AuthorizeNet::AIM(3pm) | AuthorizeNet AIM backend for Business::OnlinePayment. |
| Business::OnlinePayment::AuthorizeNet::AIM::ErrorCodes(3pm) | Easy lookup of Authorize.Net's AIM result reason. |
| Business::OnlinePayment::AuthorizeNet::ARB(3pm) | AuthorizeNet ARB backend for Business::OnlinePayment. |
| Business::OnlinePayment::HTTPS(3pm) | Base class for HTTPS payment APIs. |
| Business::OnlinePayment::IPPay(3pm) | IPPay backend for Business::OnlinePayment. |
| Business::OnlinePayment::OpenECHO(3pm) | ECHO backend module for Business::OnlinePayment. |
| Business::OnlinePayment::PayConnect(3pm) | PaymentOne (formerly eBillit) PayConnect backend for. |
| Business::OnlinePayment::PayflowPro(3pm) | Payflow Pro backend for Business::OnlinePayment. |
| Business::OnlinePayment::PaymenTech(3pm) | Chase Paymentech backend for Business::OnlinePayment. |
| Business::OnlinePayment::TCLink(3pm) | TrustCommerce backend for Business::OnlinePayment. |
| Business::OnlinePayment::TransactionCentral(3pm) | Transaction Central backend module for Business::OnlinePayment. |
| Business::OnlinePayment::viaKLIX(3pm) | ViaKLIX backend for Business::OnlinePayment. |
| Business::PayPal::API(3pm) | PayPal SOAP API client with sandbox support. |
| Business::PayPal::API::AuthorizationRequest(3pm) | PayPal AuthorizationRequest API. |
| Business::PayPal::API::CaptureRequest(3pm) | PayPal CaptureRequest API. |
| Business::PayPal::API::DirectPayments(3pm) | PayPal DirectPayments API. |
| Business::PayPal::API::ExpressCheckout(3pm) | PayPal Express Checkout API. |
| Business::PayPal::API::GetBalance(3pm) | PayPal GetBalance API. |
| Business::PayPal::API::GetTransactionDetails(3pm) | PayPal GetTransactionDetails API. |
| Business::PayPal::API::MassPay(3pm) | PayPal MassPay API. |
| Business::PayPal::API::ReauthorizationRequest(3pm) | PayPal ReauthorizationRequest API. |
| Business::PayPal::API::RecurringPayments(3pm) | PayPal RecurringPayments API. |
| Business::PayPal::API::RefundTransaction(3pm) | PayPal RefundTransaction API. |
| Business::PayPal::API::TransactionSearch(3pm) | PayPal TransactionSearch API. |
| Business::PayPal::API::VoidRequest(3pm) | PayPal VoidRequest API. |
| Business::Tax::VAT::Validation(3pm) | Validate EU VAT numbers against VIES. |
| Business::US::USPS::WebTools(3pm) | Use the US Postal Service Web Tools. |
| bustle(1) | D-Bus visualiser. |
| bustle-pcap(1) | Generate D-Bus logs for bustle. |
| busy(3tk) | Confine pointer events to a window sub-tree. |
| busybox(1) | The Swiss Army Knife of Embedded Linux. |
| busyspheres(1) | Particle spheres. |
| butc(5) | Defines Tape Coordinator instructions for automated tape devices. |
| butc(8) | Initializes the Tape Coordinator process. |
| butc_logs(5) | Message logs from the Tape Coordinator process. |
| buthead(1) | Copies all but the first few lines. |
| butteraugli(1) | Measuring perceived differences between images. |
| buttercup(1) | Behaviour-driven testing for Emacs Lisp packages. |
| button(3tk) | Create and manipulate 'button' action widgets. |
| Button2_6(3I) | Interactive buttons. |
| buxon(1) | RDF sioc:Forum browser. |
| _BV(3avr) ↣ avr_sfr(3avr) | … |
| bvd(1) | Boogie Verification Debugger. |
| bvedit(1) ↣ bvi(1) | Visual editor for binary files. |
| bvi(1) | Visual editor for binary files. |
| bview(1) ↣ bvi(1) | Visual editor for binary files. |
| bvnc(1) ↣ bssh(1) | Browse for SSH/VNC servers on the local network. |
| bw(1) | Decentralized configuration management system with Python. |
| bw_file_rd(8) | Time the reading and summing of a file. |
| bw_mem(8) | Time memory bandwidth. |
| bw_mem_rd(8) | Time memory read rate (with overhead). |
| bw_mmap_rd(8) | Time the reading and summing of a file. |
| bw_pipe(8) | Time data movement through pipes. |
| bw_tcp(8) | Time data movement through TCP/IP sockets. |
| bw_unix(8) | UNIX pipe bandwidth. |
| bwbar(8) | Generates text and graphical readout of current bandwidth use. |
| bwbasic(1) | Bywater BASIC interpreter/shell. |
| bwctl(1) | Client application to request throughput, traceroute, ping and owamp tests. |
| bwctld(8) | Bandwidth Control server. |
| bwctld.conf(5) | Bandwidth Control daemon configuration file. |
| bwctld.keys(5) | Bandwidth Control Daemon AES keyfile database. |
| bwctld.limits(5) | Bandwidth Control daemon policy configuration file. |
| bwctlrc(5) | Bandwidth Control configuration file. |
| bwi(4freebsd) | Broadcom BCM43xx IEEE 802.11b/g wireless network driver. |
| bwild(8) | Bacula's 'wildcard' engine. |
| bwm-ng(1) | Bandwidth Monitor NG (Next Generation), a live bandwidth monitor for network and disk io. |
| bwn(4freebsd) | Broadcom BCM43xx IEEE 802.11b/g wireless network driver. |
| bwping(1) ↣ bwctl(1) | Client application to request throughput, traceroute, ping and owamp tests. |
| bwrap(1) | Container setup utility. |
| bwtraceroute(1) ↣ bwctl(1) | Client application to request throughput, traceroute, ping and owamp tests. |
| bxcommit(1) | Interactive Tool to Commit Redologs into flat Disk Images for Bochs. |
| bxe(4freebsd) | QLogic NetXtreme II Ethernet 10Gb PCIe adapter driver. |
| bximage(1) | Interactive Disk Image Creator for Bochs. |
| byacc(1) | An LALR(1) parser generator. |
| byaccj(1) | An LALR(1) parser generator for Java. |
| bygfoot(6) | Football (a.k.a soccer) management game. |
| byobu(1) | Wrapper script for seeding a user's byobu configuration and launching a text based window manager. |
| byobu-config(1) | Configuration utility for byobu. |
| byobu-ctrl-a(1) | Configure Byobu's ctrl-a behavior. |
| byobu-disable(1) ↣ byobu-enable(1) | Wrapper script for enabling/disabling automatic startup of byobu after login. |
| byobu-disable-prompt(1) ↣ byobu-prompt(1) | Add and remove a nice color prompt to your shell. |
| byobu-enable(1) | Wrapper script for enabling/disabling automatic startup of byobu after login. |
| byobu-enable-prompt(1) ↣ byobu-prompt(1) | Add and remove a nice color prompt to your shell. |
| byobu-export(1) | DEPRECATED. |
| byobu-janitor(1) | Script for cleaning and upgrading environment after upgrades. |
| byobu-keybindings(1) | Toggle on/off Byobu's keybindings. |
| byobu-launch(1) ↣ byobu-launcher(1) | Byobu Launcher. |
| byobu-launcher(1) | Byobu Launcher. |
| byobu-launcher-install(1) | Byobu Launcher installation utility. |
| byobu-launcher-uninstall(1) | Byobu Launcher uninstallation utility. |
| byobu-layout(1) | Save and restore byobu-tmux layouts. |
| byobu-prompt(1) | Add and remove a nice color prompt to your shell. |
| byobu-quiet(1) | Silence all of Byobu's status indicators and eliminate the hardstatus line. |
| byobu-reconnect-sockets(1) | Sourcable script that updates GPG_AGENT_INFO and DBUS_SESSION_BUS_ADDRESS in the. |
| byobu-screen(1) | Launch byobu with screen as the backend. |
| byobu-select-backend(1) | Select your default Byobu backend window manager. |
| byobu-select-profile(1) | Select your Byobu foreground and background colors. |
| byobu-select-session(1) | Select and connect to a byobu session. |
| byobu-shell(1) | Print the message of the day and launch a shell. |
| byobu-silent(1) | … |
| byobu-status(1) | Displays status suitable for printing by the BYOBU_BACKEND. |
| byobu-status-detail(1) | Wrapper that uses a sensible pager. |
| byobu-tmux(1) | Launch byobu with tmux as the backend. |
| byobu-ugraph(1) | Helper script for notification history graphs. |
| byobu-ulevel(1) | Helper script for notification level indicators. |
| byte_chr(3) | Search for a byte in a string. |
| byte_copy(3) | Copy a string. |
| byte_copyr(3) | Copy a string. |
| byte_diff(3) | Compare two strings. |
| byte_equal(3) | Compare two strings. |
| byte_rchr(3) | Search for a byte in a string. |
| byte_zero(3) | Initialize a string. |
| bytecode(3) | Java library for the editing of the language's bytecode. |
| byteorder(3) | Convert values between host and network byte order. |
| byteorder(3bsd) | … |
| byteorder(9freebsd) | … |
| byteprefix(5) | Configuration for display of sizes. |
| Bytes(3o) | Byte sequence operations. |
| bytes(3perl) | Perl pragma to expose the individual bytes of characters. |
| bytes-circle(1) | Show byte statistics as an ASCII circle graph. |
| Bytes::Random::Secure(3pm) | Perl extension to generate cryptographically-secure random bytes. |
| BytesLabels(3o) | Byte sequence operations. |
| bytgpio(4freebsd) | Intel Bay Trail SoC GPIO controller. |
| byzanz(1) | Small screencast creator. |
| byzanz-playback(1) | Process a byzanz debug recording. |
| byzanz-record(1) | Record your desktop session to an animated GIF. |
| bz2(3trf) | Data compression "bz2". |
| bzadmin(6) | A text based client for BZFlag. |
| bzcat(1) ↣ bzip2(1) | A block-sorting file compressor, v1.0.6. |
| bzcmp(1) ↣ bzdiff(1) | Compare bzip2 compressed files. |
| bzdiff(1) | Compare bzip2 compressed files. |
| bzegrep(1) ↣ bzgrep(1) | Search possibly bzip2 compressed files for a regular expression. |
| bzero(3) | Zero a byte string. |
| bzexe(1) | Compress executable files in place. |
| bzfgrep(1) ↣ bzgrep(1) | Search possibly bzip2 compressed files for a regular expression. |
| bzflag(6) | A tank battle game. |
| bzfquery(6) | Contact a bzflag server and print the game status. |
| bzfs(6) | BZFlag game server. |
| bzgrep(1) | Search possibly bzip2 compressed files for a regular expression. |
| bzip2(1) | A block-sorting file compressor, v1.0.6. |
| bzip2recover(1) ↣ bzip2(1) | A block-sorting file compressor, v1.0.6. |
| bzless(1) ↣ bzmore(1) | File perusal filter for crt viewing of bzip2 compressed text. |
| bzmore(1) | File perusal filter for crt viewing of bzip2 compressed text. |
| bzr-buildpackage(1) | Build a debian package from a bazaar branch. |
| bzr.bzr(1) | Bazaar next-generation distributed version control. |
| bzrp(1) | Just like bzr, except pipe standard out to a sensible pager. |
| bzw(5) | BZFlag world file format. |
| bzz(1) | DjVu general purpose compression utility. |