Manual pages
Origin: USER COMMANDS.
| [ Alias ↣ ] Name (section) | Brief |
|---|---|
| admesh(1) | A program for processing triangulated solid meshes. |
| aesfix(1) | Correct bit errors in an AES key schedules. |
| aeskeyfind(1) | Locates 128-bit and 256-bit AES keys in a captured memory image. |
| appstream-compose(1) | Generate AppStream metadata. |
| appstream-util(1) | Manipulate AppStream, AppData and MetaInfo metadata. |
| apt-venv(1) | Apt virtual environment. |
| argdist-bpfcc(8) | Trace a function and display a histogram or frequency count of its parameter values. Uses Linux. |
| bashreadline-bpfcc(8) | Print entered bash commands system wide. Uses Linux eBPF/bcc. |
| biolatency-bpfcc(8) | Summarize block device I/O latency as a histogram. |
| biosnoop-bpfcc(8) | Trace block device I/O and print details incl. issuing PID. |
| biotop-bpfcc(8) | Block device (disk) I/O by process top. |
| bitesize-bpfcc(8) | Summarize block device I/O size as a histogram - Linux eBPF/bcc. |
| bitesize-perf(8) | Show disk I/O size as a histogram. Uses Linux perf_events. |
| bpflist-bpfcc(8) | Display processes currently using BPF programs and maps. |
| bps-bpfcc(8) | List all BPF programs. 'ps' for BPF programs. |
| btrfsdist-bpfcc(8) | Summarize btrfs operation latency. Uses Linux eBPF/bcc. |
| btrfsslower-bpfcc(8) | Trace slow btrfs file operations, with per-event details. |
| cachestat-bpfcc(8) | Statistics for linux page cache hit/miss ratios. Uses Linux eBPF/bcc. |
| cachestat-perf(8) | Measure page cache hits/misses. Uses Linux ftrace. |
| cachetop-bpfcc(8) | Statistics for linux page cache hit/miss ratios per processes. Uses Linux eBPF/bcc. |
| capable-bpfcc(8) | Trace security capability checks (cap_capable()). |
| cec-client(1) | CEC connection client utility. |
| cec-config(1) | CEC connection configuration utility. |
| cpudist-bpfcc(8) | On- and off-CPU task time as a histogram. |
| cpuunclaimed-bpfcc(8) | Sample CPU run queues and calculate unclaimed idle CPU. Uses Linux eBPF/bcc. |
| dbslower-bpfcc(8) | Trace MySQL/PostgreSQL server queries slower than a threshold. |
| dbstat-bpfcc(8) | Collect histograms of MySQL/PostgreSQL query latencies. |
| dcsnoop-bpfcc(8) | Trace directory entry cache (dcache) lookups. Uses Linux eBPF/bcc. |
| dcstat-bpfcc(8) | Directory entry cache (dcache) stats. Uses Linux eBPF/bcc. |
| deadlock_detector-bpfcc(8) | Find potential deadlocks (lock order inversions) in a running program. |
| dnseval(1) | Bulk ping utility that sends an arbitrary DNS query to a list of DNS servers. |
| dnsping(1) | DNS ping utility. |
| dnstraceroute(1) | DNS traceroute utility. |
| execsnoop-bpfcc(8) | Trace new processes via exec() syscalls. Uses Linux eBPF/bcc. |
| execsnoop-perf(8) | Trace process exec() with arguments. Uses Linux ftrace. |
| ext4dist-bpfcc(8) | Summarize ext4 operation latency. Uses Linux eBPF/bcc. |
| ext4slower-bpfcc(8) | Trace slow ext4 file operations, with per-event details. |
| f3dinfo(1) | Field3D Info. |
| filelife-bpfcc(8) | Trace the lifespan of short-lived files. Uses Linux eBPF/bcc. |
| fileslower-bpfcc(8) | Trace slow synchronous file reads and writes. |
| filetop-bpfcc(8) | File reads and writes by filename and process. Top for files. |
| fsniper(1) | Watch directories and apply rules to newly created files. |
| funccount-bpfcc(8) | Count function, tracepoint, and USDT probe calls matching a pattern. Uses Linux eBPF/bcc. |
| funccount-perf(8) | Count kernel function calls matching specified wildcards. Uses Linux ftrace. |
| funcgraph-perf(8) | Trace kernel function graph, showing child function calls and times. Uses Linux ftrace. |
| funclatency-bpfcc(8) | Time functions and print latency as a histogram. |
| funcslower-bpfcc(8) | Trace slow kernel or user function calls. |
| funcslower-perf(8) | Trace kernel functions slower than a threshold (microseconds). Uses Linux ftrace. |
| functrace-perf(8) | Trace kernel function calls matching specified wildcards. Uses Linux ftrace. |
| gethostlatency-bpfcc(8) | Show latency for getaddrinfo/gethostbyname[2] calls. Uses Linux eBPF/bcc. |
| gsettings-data-convert(1) | GConf to GSettings data migration. |
| gsettings-schema-convert(1) | GConf to GSettings schema conversion. |
| hardirqs-bpfcc(8) | Measure hard IRQ (hard interrupt) event time. Uses Linux eBPF/bcc. |
| hud-cli(1) | Tool to exercise the HUD on the command line. |
| hud-dump-application(1) | Tool to dump information on an application from the HUD usage database. |
| hud-list-applications(1) | Tool to list the applications in the HUD usage database. |
| hud-verify-app-info(1) | Tool to verify an app-info file that is expected to be used in the HUD. |
| iolatency-perf(8) | Summarize block device I/O latency as a histogram. Uses Linux ftrace. |
| iosnoop-perf(8) | Trace block I/O events as they occur. Uses Linux ftrace. |
| killsnoop-bpfcc(8) | Trace signals issued by the kill() syscall. Uses Linux eBPF/bcc. |
| killsnoop-perf(8) | Trace kill() syscalls with process and signal details. Uses Linux ftrace. |
| kprobe-perf(8) | Trace a given kprobe definition. Kernel dynamic tracing. Uses Linux ftrace. |
| lirc-config-tool(1) | Tool to scan and generate lirc config files. |
| llcstat-bpfcc(8) | Summarize CPU cache references and misses by process. Uses Linux eBPF/bcc. |
| mcu8051ide(1) | … |
| mdflush-bpfcc(8) | Trace md flush events. Uses Linux eBPF/bcc. |
| mdp(1) | A command-line based markdown presentation tool. |
| memleak-bpfcc(8) | Print a summary of outstanding allocations and their call stacks to detect memory leaks. Uses Linux. |
| mia-2davgmasked(1) | Evaluate average intensities of an image series. |
| mia-2dbinarycombine(1) | Combine two binary images. |
| mia-2dcost(1) | Evaluate the similarity between two 2D images. |
| mia-2ddeform(1) | Transform a 2D image by means of a vector field. |
| mia-2ddistance(1) | Distance between binary masks. |
| mia-2deval-transformquantity(1) | Evaluate derivative of a transformation. |
| mia-2dfluid(1) | Fluid dynamic 2D registration. |
| mia-2dfluid-syn-registration(1) | Non-linear registration of 2D images by using a diffeomorphic SyN reg‐. |
| mia-2dforce(1) | Registering force between two 2D images. |
| mia-2dfuzzysegment(1) | A fuzzy c-means segmentation of a 2D image. |
| mia-2dgrayimage-combine-to-rgb(1) | Combine gray scale images to an rgb image. |
| mia-2dgroundtruthreg(1) | Registration of a series of 2D images. |
| mia-2dimagecombine-dice(1) | Evaluate the dice index between two binary 2D images. |
| mia-2dimagecombiner(1) | Combine two 2D images. |
| mia-2dimagecreator(1) | Create a synthetic 2D image. |
| mia-2dimagefilter(1) | Run filters on a 2D image. |
| mia-2dimagefilterstack(1) | Run filters on a series of 2D images. |
| mia-2dimagefullstats(1) | Evaluate some stats over an image. |
| mia-2dimageregistration(1) | Run a 2d image registration. |
| mia-2dimageselect(1) | Select one image from a multi-record file. |
| mia-2dimageseries-maximum-intensity-projection(1) | Evaluate maximum per-pixel intensities of an image. |
| mia-2dimagestack-cmeans(1) | Calculate the c-means classification for a series of images. |
| mia-2dimagestats(1) | Evaluate some statistics of a 2D image. |
| mia-2dlerp(1) | Linearly combine two 2D images. |
| mia-2dmany2one-nonrigid(1) | Registration of a series of 2D images. |
| mia-2dmulti-force(1) | Registration force between two images. |
| mia-2dmultiimageregistration(1) | Non-linear registration of 2D images. |
| mia-2dmultiimageto3d(1) | Convert a 2D multi-record image to a 3D image. |
| mia-2dmultiimagevar(1) | Evaluate the intensity variation of pixels in a series of images. |
| mia-2dmyocard-ica(1) | Run an ICA analysis on a series of 2D images. |
| mia-2dmyocard-icaseries(1) | Run an ICA analysis on a series of 2D images. |
| mia-2dmyocard-segment(1) | Work in progress. |
| mia-2dmyoica-full(1) | Run a registration of a series of 2D images. |
| mia-2dmyoica-nonrigid(1) | Run a registration of a series of 2D images. |
| mia-2dmyoica-nonrigid-parallel(1) | Run a registration of a series of 2D images. |
| mia-2dmyoica-nonrigid2(1) | Run a registration of a series of 2D images. |
| mia-2dmyoicapgt(1) | Run a registration of a series of 2D images. |
| mia-2dmyomilles(1) | Run a registration of a series of 2D images. |
| mia-2dmyoperiodic-nonrigid(1) | Run a registration of a series of 2D images. |
| mia-2dmyopgt-nonrigid(1) | Run a registration of a series of 2D images. |
| mia-2dmyoserial-nonrigid(1) | Run a serial registration of a series of 2D images. |
| mia-2dmyoseries-compdice(1) | Evaluate the dice index between segmentations. |
| mia-2dmyoseries-dice(1) | Evaluate the dice index between segmentations. |
| mia-2dmyoset-all2one-nonrigid(1) | Non-linear registration of a series of 2D images. |
| mia-2dsegcompare(1) | Evaluate the Hausdorff distance between segmentations. |
| mia-2dseghausdorff(1) | Evaluate the Hausdorff distance between segmentations. |
| mia-2dsegment-ahmed(1) | Run a fuzzy c-means segmentation of a 2D image. |
| mia-2dsegment-fuzzyw(1) | Run a fuzzy c-means segmentation of a 2D image. |
| mia-2dsegment-local-cmeans(1) | Run a c-means segmentation of a 2D image. |
| mia-2dsegment-local-kmeans(1) | Run a k-means segmentation of a 2D image. |
| mia-2dsegment-per-pixel-kmeans(1) | Run a k-means segmentation of a 2D image. |
| mia-2dsegmentcropbox(1) | Evaluate a crop-box around a manual segmentation. |
| mia-2dsegseriesstats(1) | Evaluate time-intensity curves in masked regions of image series. |
| mia-2dsegshift(1) | Translate a segmentation by the given amount. |
| mia-2dsegshiftperslice(1) | Translate a segmentation by the given amount. |
| mia-2dseries-mincorr(1) | Evaluate minimal correlation of time-intensity curves. |
| mia-2dseries-sectionmask(1) | Evaluate masks from a segmentation. |
| mia-2dseries-segdistance(1) | Evaluate mean distance between segmentations. |
| mia-2dseries2dordermedian(1) | Evaluate time-intensity median 2nd order derivative of a series. |
| mia-2dseries2sets(1) | Combine images of a series to sets. |
| mia-2dseriescorr(1) | Evaluate the time-intensity correlation in a series of images. |
| mia-2dseriesgradMAD(1) | Evaluate the time-intensity gradient MAD in a series of images. |
| mia-2dseriesgradvariation(1) | Evaluate the time-intensity gradient variation in a series of images. |
| mia-2dserieshausdorff(1) | Evaluate Hausdorff distance between segmentation sets. |
| mia-2dseriessmoothgradMAD(1) | Evaluate pixel-wise time-intensity gradient of a 2D image series. |
| mia-2dseriestovolume(1) | Create a 3D volume from a segmentation series. |
| mia-2dstack-cmeans-presegment(1) | Pre-classify the input image series by using a c-means estimator. |
| mia-2dstackfilter(1) | Filter a series of 2D images in a 3D fashion. |
| mia-2dto3dimage(1) | Combine a series of 2D images to a volume. |
| mia-2dto3dimageb(1) | Combine a series of 2D images to a volume. |
| mia-2dtrackpixelmovement(1) | Track positions in 2D. |
| mia-2dtransform(1) | Transform a 2D image. |
| mia-2dtransformation-to-strain(1) | Green strain tensor. |
| mia-3dbinarycombine(1) | Combine two binary images. |
| mia-3dbrainextractT1(1) | Extract the brain from a 3D T1 MRI head image. |
| mia-3dcombine-imageseries(1) | Combine images. |
| mia-3dcombine-mr-segmentations(1) | Combine segmentations. |
| mia-3dcost(1) | Evaluate similarity of two 3D images. |
| mia-3dcost-translatedgrad(1) | Evaluate the cost gradient between two images and convert it to a spline. |
| mia-3dcrispsegment(1) | Label segmentation according to probabilities. |
| mia-3ddeform(1) | Transform a 3D image by means of a vector field. |
| mia-3ddistance(1) | Evaluate the distance between two binary shapes. |
| mia-3ddistance-stats(1) | Evaluate distance statistics for two labeled images. |
| mia-3deval-transformquantity(1) | Evaluate derivative of a transformation. |
| mia-3dfield2norm(1) | Evaluate the norm image of a 3D vector field. |
| mia-3dfluid(1) | Fluid dynamic 3D registration. |
| mia-3dfluid-syn-registration(1) | Non-linear registration of 3D images by using a diffeomorphic SyN reg‐. |
| mia-3dforce(1) | Evaluate the registration force between two 3D images. |
| mia-3dfuzzysegment(1) | Fuzzy c-means segmentation of a 3D image. |
| mia-3dgetsize(1) | Print the dimensions of a 3D image. |
| mia-3dgetslice(1) | Extract slices from a 3D image. |
| mia-3dimageaddattributes(1) | Add attributes to the meta data of a 3D image. |
| mia-3dimagecombine(1) | Combine two 3D images. |
| mia-3dimagecreator(1) | Create a synthetic 3D image. |
| mia-3dimagefilter(1) | Filter a 3D images. |
| mia-3dimagefilterstack(1) | Filter a series of 3D images. |
| mia-3dimageselect(1) | Select one image from multi-image file. |
| mia-3dimagestatistics-in-mask(1) | Evaluate statistics within a masked region of the input data. |
| mia-3dimagestats(1) | Evaluate some image statistics. |
| mia-3disosurface-from-stack(1) | Extract an ist-surface froma a 3D image. |
| mia-3disosurface-from-volume(1) | Extract an ist-surface froma a 3D image. |
| mia-3dlandmarks-distances(1) | Evaluate per landmark distances between 3D landmark sets. |
| mia-3dlandmarks-transform(1) | Transform 3D landmark positions. |
| mia-3dlerp(1) | Linearly combine two 3D images. |
| mia-3dmany2one-nonrigid(1) | Registration of series of 3D images. |
| mia-3dmaskseeded(1) | Mask an area by seeded region growing. |
| mia-3dmotioncompica-nonrigid(1) | Non-linear registration of a series of 3D images. |
| mia-3dnonrigidreg(1) | Non-linear registration of 3D images. |
| mia-3dnonrigidreg-alt(1) | Non-linear registration of 3D images. |
| mia-3dprealign-nonrigid(1) | Registration of a series of 3D images. |
| mia-3dpropose-boundingbox(1) | Evaluate a bounding box for the image. |
| mia-3drigidreg(1) | Linear registration of 3D images. |
| mia-3dsegment-ahmed(1) | Run a fuzzy c-means segmentation of a 3D image. |
| mia-3dsegment-local-cmeans(1) | Run a c-means segmentation of a 3D image. |
| mia-3dserial-nonrigid(1) | Serial registration of 3D images. |
| mia-3dseries-track-intensity(1) | Track intensities of pixels in series of 3D images. |
| mia-3dtrackpixelmovement(1) | Track positions in 3D. |
| mia-3dtransform(1) | Transform a 3D image. |
| mia-3dtransform2vf(1) | Create Vectorfield from a transformation. |
| mia-3dvectorfieldcreate(1) | 3D vector field creation. |
| mia-3dvf2transform(1) | Convert a 3D vectorfield from a 3D transformation. |
| mia-3dvfcompare(1) | Compare two Vectorfields. |
| mia-cmeans(1) | C-means classification of a histogram. |
| mia-filenumberpattern(1) | File name number pattern analysis. |
| mia-labelsort(1) | Create sorted histogram mapping. |
| mia-mesh-deformable-model(1) | Fit a mesh by using a deformable model. |
| mia-mesh-to-maskimage(1) | Create a binary mask from the mesh surfac. |
| mia-meshdistance-to-stackmask(1) | Evaluate the distance between a binary shape given as reference and a. |
| mia-meshfilter(1) | Run filters on a 3D mesh. |
| mia-multihist(1) | Histogram of a series of 2D images. |
| mia-myowavelettest(1) | Wavelet based curve analysis. |
| mia-plugin-help(1) | Print help about plug-in groups. |
| mia-raw2image(1) | Convert raw data into a 2D image. |
| mia-raw2volume(1) | Convert raw data into a 3D image. |
| mia-wavelettrans(1) | Column wise wavelet transform. |
| mira(1) | The Genome and EST Sequence Assembly System. |
| mocha(1) | Simple, flexible, fun test framework. |
| mountsnoop-bpfcc(8) | Trace mount() and umount() syscalls. Uses Linux eBPF/bcc. |
| mysqld_qslower-bpfcc(8) | Trace MySQL server queries slower than a threshold. |
| netload(1) | Network device load monitor. |
| nfsdist-bpfcc(8) | Summarize NFS operation latency. Uses Linux eBPF/bcc. |
| nfsslower-bpfcc(8) | Trace slow NFS file operations, with per-event details. |
| nvtv(1x) | GUI to control TV output hardware settings. |
| offcputime-bpfcc(8) | Summarize off-CPU time by kernel stack trace. Uses Linux eBPF/bcc. |
| offwaketime-bpfcc(8) | Summarize blocked time by off-CPU stack + waker stack. Uses Linux eBPF/bcc. |
| oomkill-bpfcc(8) | Trace oom_kill_process(). Uses Linux eBPF/bcc. |
| opensnoop-bpfcc(8) | Trace open() syscalls. Uses Linux eBPF/bcc. |
| opensnoop-perf(8) | Trace open() syscalls with file details. Uses Linux ftrace. |
| pdfcrack(1) | Password recovery tool for PDF-files. |
| peet(1) | Piped reverse tee: read from many file descriptors and copy to one. |
| perf-stat-hist-perf(8) | Histogram summary of tracepoint values. Uses Linux perf_events. |
| pidpersec-bpfcc(8) | Count new processes (via fork()). Uses Linux eBPF/bcc. |
| pipexec(1) | Create a directed graph of processes and pipes. |
| plsense(1) | Omni completion tool for Perl. |
| posh(1) | Policy-compliant Ordinary SHell. |
| procenv(1) | Display process environment details. |
| profile-bpfcc(8) | Profile CPU usage by sampling stack traces. Uses Linux eBPF/bcc. |
| ptee(1) | Piped tee: read from one file descriptor and copy to many. |
| qd-config(1) | Determine flags for compilation and linking. |
| reset-ftrace-perf(8) | Reset state of ftrace, disabling all tracing. Written for Linux ftrace. |
| reset-trace-bpfcc(8) | Reset the state of tracing. |
| rrep(1) | Replace patterns in files. |
| rsakeyfind(1) | Locates BER-encoded RSA private keys in memory images. |
| runqlat-bpfcc(8) | Run queue (scheduler) latency as a histogram. |
| runqlen-bpfcc(8) | Scheduler run queue length as a histogram. |
| saint-int-ctrl(1) | Support continuous measurements in SAINT. |
| saint-reformat(1) | Imputs missing data and cleans up duplicate entries. |
| saint-spc-ctrl(1) | Run SAINT with control data. |
| saint-spc-noctrl-matrix(1) | Run SAINT for a (large-scale, matrix-formatted) dataset without control purification. |
| slabratetop-bpfcc(8) | Kernel SLAB/SLUB memory cache allocation rate top. Uses Linux BPF/bcc. |
| softirqs-bpfcc(8) | Measure soft IRQ (soft interrupt) event time. Uses Linux eBPF/bcc. |
| spamprobe(1) | A Bayesian spam filter. |
| sslsniff-bpfcc(8) | Print data passed to OpenSSL. Uses Linux eBPF/bcc. |
| stackcount-bpfcc(8) | Count function calls and their stack traces. Uses Linux eBPF/bcc. |
| statsnoop-bpfcc(8) | Trace stat() syscalls. Uses Linux eBPF/bcc. |
| syncsnoop-bpfcc(8) | Trace sync() syscall. Uses Linux eBPF/bcc. |
| syrthes-post(1) | Post-processor for the parallel version of SYRTHES. |
| syrthes-pp(1) | Pre-processor for SYRTHES parallel version. |
| syrthes-ppfunc(1) | Preliminary traitement of data file functions for SYRTHES. |
| syscount-bpfcc(8) | Summarize syscall counts and latencies. |
| syscount-perf(8) | Count system calls. Uses Linux perf_events. |
| tcpaccept-bpfcc(8) | Trace TCP passive connections (accept()). Uses Linux eBPF/bcc. |
| tcpconnect-bpfcc(8) | Trace TCP active connections (connect()). Uses Linux eBPF/bcc. |
| tcpconnlat-bpfcc(8) | Trace TCP active connection latency. Uses Linux eBPF/bcc. |
| tcplife-bpfcc(8) | Trace TCP sessions and summarize lifespan. Uses Linux eBPF/bcc. |
| tcpretrans-bpfcc(8) | Trace TCP retransmits and TLPs. Uses Linux eBPF/bcc. |
| tcpretrans-perf(8) | Show TCP retransmits, with address and other details. Uses Linux ftrace. |
| tcptop-bpfcc(8) | Summarize TCP send/recv throughput by host. Top for TCP. |
| tcptracer-bpfcc(8) | Trace TCP established connections. Uses Linux eBPF/bcc. |
| tplist-bpfcc(8) | Display kernel tracepoints or USDT probes and their formats. |
| tpoint-perf(8) | Trace a given tracepoint. Static tracing. Uses Linux ftrace. |
| trace-bpfcc(8) | Trace a function and print its arguments or return value, optionally evaluating a filter. Uses Linux. |
| ttysnoop-bpfcc(8) | Watch output from a tty or pts device. Uses Linux eBPF/bcc. |
| ucalls-bpfcc(8) | Summarize method calls from high-level languages and. |
| uflow-bpfcc(8) | Print a flow graph of method calls in high-level languages. |
| ugc-bpfcc(8) | Trace garbage collection events in high-level languages. |
| uobjnew-bpfcc(8) | Summarize object allocations in high-level languages. |
| uprobe-perf(8) | Trace a given uprobe definition. User-level dynamic tracing. Uses Linux ftrace. EXPERIMENTAL. |
| ustat-bpfcc(8) | Activity stats from high-level languages. |
| utfout(1) | Utility for producing UTF-8 output to standard streams and terminal. |
| uthreads-bpfcc(8) | Trace thread creation events in Java or pthreads. |
| vfscount-bpfcc(8) | Count VFS calls ("vfs_*"). Uses Linux eBPF/bcc. |
| vfsstat-bpfcc(8) | Statistics for some common VFS calls. Uses Linux eBPF/bcc. |
| vinagre(1) | A remote desktop viewer for the GNOME Desktop. |
| wakeuptime-bpfcc(8) | Summarize sleep to wakeup time by waker kernel stack. Uses Linux eBPF/bcc. |
| xdot(1) | Interactive viewer for Graphviz dot files. |
| xfsdist-bpfcc(8) | Summarize XFS operation latency. Uses Linux eBPF/bcc. |
| xfsslower-bpfcc(8) | Trace slow xfs file operations, with per-event details. |
| xtermset(1) | Change settings of an xterm. |
| zfsdist-bpfcc(8) | Summarize ZFS operation latency. Uses Linux eBPF/bcc. |
| zfsslower-bpfcc(8) | Trace slow zfs file operations, with per-event details. |
| zomg(1) | Libre.fm submission and radio client. |
| zomghelper(1) | Ogg Vorbis/Opus metadata reader. |