ABIVIEW - reference manual online

ABIVIEW(1e)                          EMBOSS Manual for Debian                         ABIVIEW(1e)

NAME
       abiview - Display the trace in an ABI sequencer file

SYNOPSIS
       abiview -infile infile -outseq seqout -graph xygraph [-startbase integer]
               [-endbase integer] -separate boolean [-yticks boolean] [-sequence boolean]
               [-window integer] [-bases string]

       abiview -help

DESCRIPTION
       abiview is a command line program from EMBOSS (“the European Molecular Biology Open
       Software Suite”). It is part of the "Data retrieval:Sequence data,Display" command
       group(s).

OPTIONS
   Input section
       -infile infile

   Output section
       -outseq seqout

       -graph xygraph

       -startbase integer

       -endbase integer
           Last sequence base to report or display. If the default is set to zero then the value
           of this is taken as the maximum number of bases.

       -separate boolean
           Default value: N

       -yticks boolean
           Default value: N

       -sequence boolean
           Default value: Y

       -window integer
           Default value: 40

       -bases string
           Default value: GATC

BUGS
       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or
       directly to the EMBOSS developers
       (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO
       abiview is fully documented via the tfm(1) system.

AUTHOR
       Debian Med Packaging Team <@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT
       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package.
       It can be redistributed under the same terms as EMBOSS itself.

EMBOSS 6.4.0                                05/11/2012                                ABIVIEW(1e)