Chapters Map
NAME
SYNOPSIS
DESCRIPTION
CONVENTIONS
GENERAL OPTIONS
SEQUENCE INPUT OPTIONS
ANALYSIS OPTIONS
FASTA DATABASE OPTIONS
GAPPED ALIGNMENT OPTIONS
VITERBI ALGORITHM OPTIONS
CODE GENERATION OPTIONS
HEURISTIC OPTIONS
SEEDED DYNAMIC PROGRAMMING OPTIONS
BSDP OPTIONS
SEQUENCE OPTIONS
SYMBOL COMPARISON OPTIONS
ALIGNMENT SEEDING OPTIONS
AFFINE MODEL OPTIONS
NER OPTIONS
INTRON MODELLING OPTIONS
FRAMESHIFT MODELLING OPTIONS
ALPHABET OPTIONS
TRANSLATION OPTIONS
HSP CREATION OPTIONS
ALIGNMENT OPTIONS
SPLICE SITE PREDICTION OPTIONS
STRATEGIES FOR SPEED
STRATEGIES FOR SENSITIVITY
ENVIRONMENT
EXAMPLES
VERSION
AUTHOR
AVAILABILITY
SEE ALSO
man exonerate page (1)
November 2002
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